EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000007472 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Plus strand
Length: 4454 bases
Position: chrKK082916.1:4789610-4794063
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000009667	SF3a60_bindingd	PF12108.8	1e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000011612	-	942	-	ENSCPBP00000009667	313 (aa)	-	-

Gene Model

Click here to download ENSCPBG00000007472's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000007472's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000007472	-	95	71.037	ENSCPBG00000018291	-	68	71.254

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000007472	-	95	66.851	ENSG00000183431	SF3A3	70	67.036	Homo_sapiens
ENSCPBG00000007472	-	95	61.602	ENSAPOG00000015608	sf3a3	70	61.773	Acanthochromis_polyacanthus
ENSCPBG00000007472	-	95	67.127	ENSAMEG00000001262	SF3A3	70	67.313	Ailuropoda_melanoleuca
ENSCPBG00000007472	-	79	69.231	ENSACIG00000009061	sf3a3	69	61.773	Amphilophus_citrinellus
ENSCPBG00000007472	-	95	62.155	ENSAOCG00000013954	sf3a3	70	62.327	Amphiprion_ocellaris
ENSCPBG00000007472	-	95	62.155	ENSAPEG00000007297	sf3a3	70	62.327	Amphiprion_percula
ENSCPBG00000007472	-	95	62.185	ENSATEG00000008754	sf3a3	70	62.360	Anabas_testudineus
ENSCPBG00000007472	-	93	72.727	ENSAPLG00000014900	SF3A3	66	72.956	Anas_platyrhynchos
ENSCPBG00000007472	-	95	67.956	ENSACAG00000017058	SF3A3	70	68.144	Anolis_carolinensis
ENSCPBG00000007472	-	69	67.433	ENSANAG00000036903	-	62	67.433	Aotus_nancymaae
ENSCPBG00000007472	-	94	67.826	ENSANAG00000014878	SF3A3	69	67.826	Aotus_nancymaae
ENSCPBG00000007472	-	95	61.602	ENSACLG00000017977	sf3a3	70	61.773	Astatotilapia_calliptera
ENSCPBG00000007472	-	95	63.536	ENSAMXG00000016855	sf3a3	61	63.712	Astyanax_mexicanus
ENSCPBG00000007472	-	95	67.778	ENSBTAG00000007299	SF3A3	70	67.778	Bos_taurus
ENSCPBG00000007472	-	75	37.970	WBGene00011758	T13H5.4	52	38.403	Caenorhabditis_elegans
ENSCPBG00000007472	-	95	66.851	ENSCJAG00000002176	SF3A3	70	67.036	Callithrix_jacchus
ENSCPBG00000007472	-	95	67.127	ENSCAFG00000000683	-	70	67.313	Canis_familiaris
ENSCPBG00000007472	-	95	67.127	ENSCAFG00000003222	-	70	67.313	Canis_familiaris
ENSCPBG00000007472	-	95	67.127	ENSCAFG00020006186	SF3A3	70	67.313	Canis_lupus_dingo
ENSCPBG00000007472	-	95	69.318	ENSCHIG00000020638	SF3A3	70	69.318	Capra_hircus
ENSCPBG00000007472	-	95	66.851	ENSTSYG00000008417	SF3A3	75	67.036	Carlito_syrichta
ENSCPBG00000007472	-	78	57.028	ENSCAPG00000003466	SF3A3	64	57.490	Cavia_aperea
ENSCPBG00000007472	-	95	66.851	ENSCPOG00000008660	SF3A3	70	67.036	Cavia_porcellus
ENSCPBG00000007472	-	79	67.730	ENSCCAG00000034048	-	70	67.730	Cebus_capucinus
ENSCPBG00000007472	-	95	67.036	ENSCCAG00000033732	SF3A3	70	67.036	Cebus_capucinus
ENSCPBG00000007472	-	95	66.851	ENSCATG00000043496	SF3A3	71	66.301	Cercocebus_atys
ENSCPBG00000007472	-	70	71.486	ENSCATG00000041660	-	55	71.486	Cercocebus_atys
ENSCPBG00000007472	-	79	60.133	ENSCATG00000043537	-	71	55.000	Cercocebus_atys
ENSCPBG00000007472	-	95	66.851	ENSCLAG00000010838	SF3A3	70	67.036	Chinchilla_lanigera
ENSCPBG00000007472	-	95	66.851	ENSCSAG00000001120	SF3A3	74	67.036	Chlorocebus_sabaeus
ENSCPBG00000007472	-	78	49.191	ENSCING00000002730	-	62	49.838	Ciona_intestinalis
ENSCPBG00000007472	-	80	49.524	ENSCSAVG00000005063	-	63	49.524	Ciona_savignyi
ENSCPBG00000007472	-	83	58.599	ENSCANG00000035535	-	74	57.276	Colobus_angolensis_palliatus
ENSCPBG00000007472	-	95	66.851	ENSCANG00000042083	SF3A3	71	66.301	Colobus_angolensis_palliatus
ENSCPBG00000007472	-	95	66.575	ENSCGRG00001011320	Sf3a3	70	66.759	Cricetulus_griseus_chok1gshd
ENSCPBG00000007472	-	95	66.575	ENSCGRG00000012156	Sf3a3	70	66.759	Cricetulus_griseus_crigri
ENSCPBG00000007472	-	79	68.590	ENSCSEG00000010401	sf3a3	70	67.110	Cynoglossus_semilaevis
ENSCPBG00000007472	-	77	74.349	ENSCVAG00000010239	sf3a3	54	74.349	Cyprinodon_variegatus
ENSCPBG00000007472	-	79	70.192	ENSDARG00000100114	sf3a3	62	70.192	Danio_rerio
ENSCPBG00000007472	-	95	66.851	ENSDNOG00000046628	SF3A3	77	66.851	Dasypus_novemcinctus
ENSCPBG00000007472	-	95	67.127	ENSDORG00000008798	Sf3a3	70	67.313	Dipodomys_ordii
ENSCPBG00000007472	-	79	49.359	FBgn0014366	noi	61	49.359	Drosophila_melanogaster
ENSCPBG00000007472	-	76	63.576	ENSEBUG00000015411	sf3a3	57	62.739	Eptatretus_burgeri
ENSCPBG00000007472	-	95	67.127	ENSEASG00005012906	SF3A3	70	67.313	Equus_asinus_asinus
ENSCPBG00000007472	-	95	70.231	ENSECAG00000017333	SF3A3	69	70.231	Equus_caballus
ENSCPBG00000007472	-	95	60.497	ENSELUG00000010024	sf3a3	70	60.665	Esox_lucius
ENSCPBG00000007472	-	95	67.127	ENSFCAG00000027772	SF3A3	70	67.313	Felis_catus
ENSCPBG00000007472	-	95	67.956	ENSFALG00000001003	SF3A3	70	68.144	Ficedula_albicollis
ENSCPBG00000007472	-	95	66.851	ENSFDAG00000020908	SF3A3	70	67.036	Fukomys_damarensis
ENSCPBG00000007472	-	95	61.326	ENSFHEG00000019107	sf3a3	75	57.851	Fundulus_heteroclitus
ENSCPBG00000007472	-	95	61.878	ENSGMOG00000015540	sf3a3	70	61.878	Gadus_morhua
ENSCPBG00000007472	-	95	67.403	ENSGALG00000001540	SF3A3	70	67.590	Gallus_gallus
ENSCPBG00000007472	-	79	68.269	ENSGAFG00000002320	sf3a3	62	68.269	Gambusia_affinis
ENSCPBG00000007472	-	79	70.192	ENSGACG00000007842	sf3a3	70	62.431	Gasterosteus_aculeatus
ENSCPBG00000007472	-	95	69.061	ENSGAGG00000014980	SF3A3	70	69.252	Gopherus_agassizii
ENSCPBG00000007472	-	95	66.851	ENSGGOG00000013928	SF3A3	70	67.036	Gorilla_gorilla
ENSCPBG00000007472	-	95	60.111	ENSGGOG00000022611	-	80	60.111	Gorilla_gorilla
ENSCPBG00000007472	-	91	66.349	ENSHBUG00000018158	sf3a3	67	66.349	Haplochromis_burtoni
ENSCPBG00000007472	-	95	66.575	ENSHGLG00000012502	SF3A3	70	66.759	Heterocephalus_glaber_female
ENSCPBG00000007472	-	95	66.575	ENSHGLG00100010546	SF3A3	70	66.759	Heterocephalus_glaber_male
ENSCPBG00000007472	-	95	60.111	ENSHCOG00000015109	sf3a3	71	60.111	Hippocampus_comes
ENSCPBG00000007472	-	95	62.707	ENSIPUG00000011603	sf3a3	70	62.707	Ictalurus_punctatus
ENSCPBG00000007472	-	95	66.851	ENSSTOG00000001691	SF3A3	70	67.036	Ictidomys_tridecemlineatus
ENSCPBG00000007472	-	95	66.575	ENSJJAG00000012404	Sf3a3	70	66.759	Jaculus_jaculus
ENSCPBG00000007472	-	95	61.050	ENSKMAG00000007632	sf3a3	70	61.219	Kryptolebias_marmoratus
ENSCPBG00000007472	-	79	59.105	ENSLBEG00000000816	sf3a3	70	53.315	Labrus_bergylta
ENSCPBG00000007472	-	95	64.641	ENSLOCG00000003273	sf3a3	70	64.641	Lepisosteus_oculatus
ENSCPBG00000007472	-	95	51.648	ENSLAFG00000008094	SF3A3	70	51.648	Loxodonta_africana
ENSCPBG00000007472	-	95	66.851	ENSMFAG00000043047	SF3A3	71	66.301	Macaca_fascicularis
ENSCPBG00000007472	-	95	55.833	ENSMFAG00000036706	-	77	55.833	Macaca_fascicularis
ENSCPBG00000007472	-	75	63.333	ENSMMUG00000038820	-	64	63.333	Macaca_mulatta
ENSCPBG00000007472	-	95	66.851	ENSMMUG00000023199	SF3A3	70	67.036	Macaca_mulatta
ENSCPBG00000007472	-	95	60.725	ENSMNEG00000028686	-	71	60.725	Macaca_nemestrina
ENSCPBG00000007472	-	95	66.851	ENSMNEG00000044291	SF3A3	71	66.301	Macaca_nemestrina
ENSCPBG00000007472	-	79	59.468	ENSMLEG00000028631	-	65	59.468	Mandrillus_leucophaeus
ENSCPBG00000007472	-	79	63.987	ENSMLEG00000036714	-	63	63.987	Mandrillus_leucophaeus
ENSCPBG00000007472	-	95	66.851	ENSMLEG00000030641	SF3A3	65	73.438	Mandrillus_leucophaeus
ENSCPBG00000007472	-	95	62.155	ENSMAMG00000001942	sf3a3	70	62.327	Mastacembelus_armatus
ENSCPBG00000007472	-	95	61.602	ENSMZEG00005016987	sf3a3	70	61.773	Maylandia_zebra
ENSCPBG00000007472	-	95	64.706	ENSMGAG00000002875	SF3A3	71	64.560	Meleagris_gallopavo
ENSCPBG00000007472	-	80	74.841	ENSMICG00000001485	-	66	74.841	Microcebus_murinus
ENSCPBG00000007472	-	79	71.795	ENSMICG00000043548	-	67	69.632	Microcebus_murinus
ENSCPBG00000007472	-	95	64.917	ENSMICG00000026541	-	77	64.917	Microcebus_murinus
ENSCPBG00000007472	-	77	75.836	ENSMOCG00000014565	-	64	66.144	Microtus_ochrogaster
ENSCPBG00000007472	-	95	61.326	ENSMOCG00000019939	-	70	61.496	Microtus_ochrogaster
ENSCPBG00000007472	-	95	61.602	ENSMMOG00000014307	sf3a3	70	61.773	Mola_mola
ENSCPBG00000007472	-	79	71.795	ENSMODG00000024045	-	62	71.795	Monodelphis_domestica
ENSCPBG00000007472	-	79	76.282	ENSMODG00000017729	-	62	76.282	Monodelphis_domestica
ENSCPBG00000007472	-	75	76.226	ENSMALG00000004836	sf3a3	58	76.226	Monopterus_albus
ENSCPBG00000007472	-	95	66.575	MGP_CAROLIEiJ_G0026449	Sf3a3	70	66.759	Mus_caroli
ENSCPBG00000007472	-	95	66.575	ENSMUSG00000028902	Sf3a3	70	66.759	Mus_musculus
ENSCPBG00000007472	-	95	65.598	MGP_PahariEiJ_G0028780	Sf3a3	69	65.789	Mus_pahari
ENSCPBG00000007472	-	95	66.575	MGP_SPRETEiJ_G0027428	Sf3a3	70	66.759	Mus_spretus
ENSCPBG00000007472	-	95	67.127	ENSMLUG00000000991	SF3A3	70	67.313	Myotis_lucifugus
ENSCPBG00000007472	-	95	58.564	ENSNGAG00000018032	Sf3a3	69	58.564	Nannospalax_galili
ENSCPBG00000007472	-	95	61.145	ENSNLEG00000011720	SF3A3	67	61.145	Nomascus_leucogenys
ENSCPBG00000007472	-	95	66.575	ENSOPRG00000012785	SF3A3	70	66.759	Ochotona_princeps
ENSCPBG00000007472	-	95	59.669	ENSODEG00000007470	-	69	59.669	Octodon_degus
ENSCPBG00000007472	-	77	76.952	ENSODEG00000018393	-	56	76.952	Octodon_degus
ENSCPBG00000007472	-	79	74.359	ENSODEG00000006854	-	63	74.359	Octodon_degus
ENSCPBG00000007472	-	95	62.604	ENSODEG00000000937	-	76	62.604	Octodon_degus
ENSCPBG00000007472	-	85	65.541	ENSONIG00000010296	sf3a3	66	65.541	Oreochromis_niloticus
ENSCPBG00000007472	-	93	72.414	ENSOANG00000002473	SF3A3	66	72.642	Ornithorhynchus_anatinus
ENSCPBG00000007472	-	95	66.575	ENSOCUG00000005407	SF3A3	70	66.759	Oryctolagus_cuniculus
ENSCPBG00000007472	-	91	64.444	ENSORLG00000008175	sf3a3	70	60.111	Oryzias_latipes
ENSCPBG00000007472	-	95	60.111	ENSORLG00020013708	sf3a3	70	60.111	Oryzias_latipes_hni
ENSCPBG00000007472	-	95	59.834	ENSORLG00015004104	sf3a3	70	59.834	Oryzias_latipes_hsok
ENSCPBG00000007472	-	95	60.221	ENSOMEG00000020177	sf3a3	70	60.388	Oryzias_melastigma
ENSCPBG00000007472	-	95	67.403	ENSOARG00000019950	SF3A3	70	67.590	Ovis_aries
ENSCPBG00000007472	-	95	67.036	ENSPPAG00000034066	SF3A3	64	74.921	Pan_paniscus
ENSCPBG00000007472	-	95	62.644	ENSPPAG00000039955	-	80	63.506	Pan_paniscus
ENSCPBG00000007472	-	95	67.127	ENSPPRG00000001258	SF3A3	70	67.313	Panthera_pardus
ENSCPBG00000007472	-	95	67.127	ENSPTIG00000007515	SF3A3	70	67.313	Panthera_tigris_altaica
ENSCPBG00000007472	-	95	67.036	ENSPTRG00000000559	SF3A3	70	67.036	Pan_troglodytes
ENSCPBG00000007472	-	94	61.281	ENSPTRG00000046013	-	79	61.281	Pan_troglodytes
ENSCPBG00000007472	-	83	58.879	ENSPANG00000031214	-	71	58.879	Papio_anubis
ENSCPBG00000007472	-	95	58.333	ENSPANG00000029393	-	70	58.333	Papio_anubis
ENSCPBG00000007472	-	95	66.851	ENSPANG00000021859	SF3A3	71	66.301	Papio_anubis
ENSCPBG00000007472	-	95	64.088	ENSPKIG00000004719	sf3a3	70	64.266	Paramormyrops_kingsleyae
ENSCPBG00000007472	-	95	66.484	ENSPSIG00000004273	SF3A3	70	66.667	Pelodiscus_sinensis
ENSCPBG00000007472	-	95	61.219	ENSPMGG00000003610	sf3a3	72	61.219	Periophthalmus_magnuspinnatus
ENSCPBG00000007472	-	95	66.575	ENSPEMG00000020805	Sf3a3	70	66.759	Peromyscus_maniculatus_bairdii
ENSCPBG00000007472	-	64	70.742	ENSPMAG00000001044	sf3a3	83	70.742	Petromyzon_marinus
ENSCPBG00000007472	-	95	67.956	ENSPCIG00000025719	SF3A3	70	68.144	Phascolarctos_cinereus
ENSCPBG00000007472	-	79	68.269	ENSPFOG00000005284	sf3a3	62	68.269	Poecilia_formosa
ENSCPBG00000007472	-	79	68.269	ENSPLAG00000003979	sf3a3	58	68.269	Poecilia_latipinna
ENSCPBG00000007472	-	79	71.000	ENSPMEG00000021132	sf3a3	78	63.037	Poecilia_mexicana
ENSCPBG00000007472	-	79	71.000	ENSPREG00000013802	sf3a3	60	71.000	Poecilia_reticulata
ENSCPBG00000007472	-	95	62.983	ENSPPYG00000001519	SF3A3	69	63.158	Pongo_abelii
ENSCPBG00000007472	-	95	59.669	ENSPCAG00000010734	SF3A3	70	59.669	Procavia_capensis
ENSCPBG00000007472	-	78	58.442	ENSPCOG00000017131	-	63	58.442	Propithecus_coquereli
ENSCPBG00000007472	-	95	64.179	ENSPCOG00000020389	-	68	64.179	Propithecus_coquereli
ENSCPBG00000007472	-	60	69.565	ENSPVAG00000010158	SF3A3	50	69.565	Pteropus_vampyrus
ENSCPBG00000007472	-	95	61.602	ENSPNYG00000000786	sf3a3	70	61.773	Pundamilia_nyererei
ENSCPBG00000007472	-	95	64.365	ENSPNAG00000010298	sf3a3	70	64.543	Pygocentrus_nattereri
ENSCPBG00000007472	-	95	66.575	ENSRNOG00000007629	Sf3a3	77	66.759	Rattus_norvegicus
ENSCPBG00000007472	-	95	66.851	ENSRBIG00000043567	SF3A3	71	66.301	Rhinopithecus_bieti
ENSCPBG00000007472	-	78	68.929	ENSRBIG00000041123	-	62	67.958	Rhinopithecus_bieti
ENSCPBG00000007472	-	68	58.077	ENSRBIG00000043833	-	56	58.077	Rhinopithecus_bieti
ENSCPBG00000007472	-	95	66.851	ENSRROG00000033888	SF3A3	71	66.301	Rhinopithecus_roxellana
ENSCPBG00000007472	-	70	65.724	ENSRROG00000032346	-	66	65.724	Rhinopithecus_roxellana
ENSCPBG00000007472	-	95	57.057	ENSSBOG00000032688	SF3A3	65	57.057	Saimiri_boliviensis_boliviensis
ENSCPBG00000007472	-	78	65.172	ENSSBOG00000026932	-	68	65.172	Saimiri_boliviensis_boliviensis
ENSCPBG00000007472	-	91	74.121	ENSSHAG00000014530	SF3A3	67	74.121	Sarcophilus_harrisii
ENSCPBG00000007472	-	95	64.306	ENSSFOG00015005975	sf3a3	70	64.489	Scleropages_formosus
ENSCPBG00000007472	-	95	61.878	ENSSMAG00000020213	sf3a3	74	60.795	Scophthalmus_maximus
ENSCPBG00000007472	-	95	59.773	ENSSDUG00000011590	sf3a3	69	59.943	Seriola_dumerili
ENSCPBG00000007472	-	95	62.155	ENSSLDG00000020635	sf3a3	70	62.327	Seriola_lalandi_dorsalis
ENSCPBG00000007472	-	95	67.403	ENSSPUG00000004010	SF3A3	70	67.590	Sphenodon_punctatus
ENSCPBG00000007472	-	95	61.696	ENSSPAG00000018653	sf3a3	70	61.773	Stegastes_partitus
ENSCPBG00000007472	-	95	67.127	ENSSSCG00000003643	SF3A3	70	67.313	Sus_scrofa
ENSCPBG00000007472	-	85	72.297	ENSTGUG00000001466	SF3A3	66	72.542	Taeniopygia_guttata
ENSCPBG00000007472	-	95	61.050	ENSTRUG00000009089	sf3a3	70	61.050	Takifugu_rubripes
ENSCPBG00000007472	-	95	59.890	ENSTNIG00000009800	sf3a3	70	60.055	Tetraodon_nigroviridis
ENSCPBG00000007472	-	95	65.193	ENSTBEG00000007614	SF3A3	70	65.374	Tupaia_belangeri
ENSCPBG00000007472	-	95	67.127	ENSTTRG00000013519	SF3A3	70	67.313	Tursiops_truncatus
ENSCPBG00000007472	-	95	67.127	ENSUAMG00000006134	SF3A3	70	67.313	Ursus_americanus
ENSCPBG00000007472	-	95	67.127	ENSUMAG00000021250	SF3A3	70	67.313	Ursus_maritimus
ENSCPBG00000007472	-	75	84.030	ENSVPAG00000004778	SF3A3	58	84.030	Vicugna_pacos
ENSCPBG00000007472	-	95	66.851	ENSVVUG00000022908	SF3A3	73	67.036	Vulpes_vulpes
ENSCPBG00000007472	-	95	63.536	ENSXETG00000022923	sf3a3	70	63.712	Xenopus_tropicalis
ENSCPBG00000007472	-	79	71.000	ENSXMAG00000017165	sf3a3	60	71.000	Xiphophorus_maculatus