EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000007810 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Minus strand
Length: 8716 bases
Position: chrKK082961.1:3441188-3449903
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000010143	RRM_1	PF00076.22	8.9e-31	1	2
ENSCPBP00000010143	RRM_1	PF00076.22	8.9e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000012172	-	492	-	ENSCPBP00000010143	163 (aa)	-	-

Gene Model

Click here to download ENSCPBG00000007810's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000007810's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000007810	-	73	39.706	ENSCPBG00000023982	ELAVL3	60	34.615
ENSCPBG00000007810	-	73	38.235	ENSCPBG00000007841	ELAVL2	55	38.235
ENSCPBG00000007810	-	73	33.077	ENSCPBG00000003611	TIA1	60	33.077
ENSCPBG00000007810	-	73	33.628	ENSCPBG00000017097	ELAVL1	50	33.628
ENSCPBG00000007810	-	83	92.424	ENSCPBG00000005782	PABPC1	52	92.424
ENSCPBG00000007810	-	73	36.667	ENSCPBG00000001103	TIAL1	57	36.667
ENSCPBG00000007810	-	82	82.836	ENSCPBG00000017755	-	73	82.836
ENSCPBG00000007810	-	81	88.636	ENSCPBG00000001038	PABPC4	52	88.636

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000007810	-	81	78.788	ENSG00000101104	PABPC1L	68	78.788	Homo_sapiens
ENSCPBG00000007810	-	91	82.443	ENSAPOG00000010842	pabpc1l	56	82.443	Acanthochromis_polyacanthus
ENSCPBG00000007810	-	83	81.061	ENSAMEG00000004099	PABPC1L	52	81.061	Ailuropoda_melanoleuca
ENSCPBG00000007810	-	91	85.496	ENSACIG00000021004	-	68	85.496	Amphilophus_citrinellus
ENSCPBG00000007810	-	91	86.555	ENSAOCG00000006167	-	54	86.555	Amphiprion_ocellaris
ENSCPBG00000007810	-	91	81.679	ENSAPEG00000010558	-	79	81.679	Amphiprion_percula
ENSCPBG00000007810	-	91	84.733	ENSATEG00000007428	pabpc1l	54	84.733	Anabas_testudineus
ENSCPBG00000007810	-	87	79.861	ENSAPLG00000008415	PABPC1L	60	79.861	Anas_platyrhynchos
ENSCPBG00000007810	-	84	83.582	ENSACAG00000011841	PABPC1L	51	83.582	Anolis_carolinensis
ENSCPBG00000007810	-	83	79.231	ENSANAG00000026826	PABPC1L	54	79.231	Aotus_nancymaae
ENSCPBG00000007810	-	91	90.756	ENSACLG00000024791	pabpc1l	55	85.496	Astatotilapia_calliptera
ENSCPBG00000007810	-	83	87.395	ENSAMXG00000013552	pabpc1l	55	87.395	Astyanax_mexicanus
ENSCPBG00000007810	-	73	85.714	ENSBTAG00000055300	-	71	85.714	Bos_taurus
ENSCPBG00000007810	-	81	43.548	ENSBTAG00000016849	PABPC1L	55	43.548	Bos_taurus
ENSCPBG00000007810	-	75	88.000	ENSCJAG00000038506	-	72	88.000	Callithrix_jacchus
ENSCPBG00000007810	-	81	79.231	ENSCJAG00000017628	PABPC1L	53	79.231	Callithrix_jacchus
ENSCPBG00000007810	-	81	80.916	ENSCAFG00000009573	PABPC1L	51	80.916	Canis_familiaris
ENSCPBG00000007810	-	83	80.303	ENSCAFG00020013828	PABPC1L	54	80.303	Canis_lupus_dingo
ENSCPBG00000007810	-	81	81.679	ENSCHIG00000025759	PABPC1L	50	81.679	Capra_hircus
ENSCPBG00000007810	-	85	81.061	ENSTSYG00000006645	PABPC1L	54	81.061	Carlito_syrichta
ENSCPBG00000007810	-	83	76.577	ENSCAPG00000014519	PABPC1L	58	76.577	Cavia_aperea
ENSCPBG00000007810	-	83	78.788	ENSCPOG00000013633	PABPC1L	53	78.788	Cavia_porcellus
ENSCPBG00000007810	-	85	79.231	ENSCCAG00000023338	PABPC1L	53	79.231	Cebus_capucinus
ENSCPBG00000007810	-	83	79.545	ENSCATG00000034065	PABPC1L	54	79.545	Cercocebus_atys
ENSCPBG00000007810	-	83	78.030	ENSCLAG00000005298	PABPC1L	53	78.030	Chinchilla_lanigera
ENSCPBG00000007810	-	83	78.788	ENSCSAG00000014242	PABPC1L	54	78.788	Chlorocebus_sabaeus
ENSCPBG00000007810	-	83	89.344	ENSCSAVG00000004246	-	58	89.344	Ciona_savignyi
ENSCPBG00000007810	-	85	82.927	ENSCSAVG00000003102	-	73	86.239	Ciona_savignyi
ENSCPBG00000007810	-	83	79.545	ENSCANG00000037530	PABPC1L	53	79.545	Colobus_angolensis_palliatus
ENSCPBG00000007810	-	81	74.242	ENSCGRG00001021938	Pabpc1l	62	74.242	Cricetulus_griseus_chok1gshd
ENSCPBG00000007810	-	81	74.242	ENSCGRG00000007946	Pabpc1l	62	74.242	Cricetulus_griseus_crigri
ENSCPBG00000007810	-	91	83.969	ENSCSEG00000021295	pabpc1l	62	83.969	Cynoglossus_semilaevis
ENSCPBG00000007810	-	91	83.206	ENSCVAG00000015943	-	62	83.206	Cyprinodon_variegatus
ENSCPBG00000007810	-	83	84.091	ENSDARG00000002597	pabpc1l	59	84.091	Danio_rerio
ENSCPBG00000007810	-	81	81.061	ENSDNOG00000048450	PABPC1L	53	81.061	Dasypus_novemcinctus
ENSCPBG00000007810	-	81	78.788	ENSDORG00000001067	Pabpc1l	53	78.788	Dipodomys_ordii
ENSCPBG00000007810	-	73	83.193	ENSEASG00005023408	-	71	83.193	Equus_asinus_asinus
ENSCPBG00000007810	-	80	44.068	ENSECAG00000040139	-	58	44.068	Equus_caballus
ENSCPBG00000007810	-	81	78.788	ENSEEUG00000005978	PABPC1L	54	78.788	Erinaceus_europaeus
ENSCPBG00000007810	-	83	87.500	ENSELUG00000001811	pabpc1l	55	87.500	Esox_lucius
ENSCPBG00000007810	-	81	79.545	ENSFCAG00000011692	PABPC1L	54	79.545	Felis_catus
ENSCPBG00000007810	-	81	82.576	ENSFALG00000005372	PABPC1L	55	82.576	Ficedula_albicollis
ENSCPBG00000007810	-	83	78.788	ENSFDAG00000008291	PABPC1L	55	78.788	Fukomys_damarensis
ENSCPBG00000007810	-	81	89.916	ENSFHEG00000003398	pabpc1l	59	89.916	Fundulus_heteroclitus
ENSCPBG00000007810	-	83	80.597	ENSGMOG00000004437	pabpc1l	53	80.597	Gadus_morhua
ENSCPBG00000007810	-	94	82.836	ENSGALG00000004123	PABPC1L	83	82.836	Gallus_gallus
ENSCPBG00000007810	-	81	89.916	ENSGAFG00000021057	pabpc1l	55	89.916	Gambusia_affinis
ENSCPBG00000007810	-	91	83.206	ENSGACG00000002792	pabpc1l	55	83.206	Gasterosteus_aculeatus
ENSCPBG00000007810	-	82	82.836	ENSGAGG00000000589	PABPC1L	59	82.836	Gopherus_agassizii
ENSCPBG00000007810	-	83	78.788	ENSGGOG00000004584	PABPC1L	54	78.788	Gorilla_gorilla
ENSCPBG00000007810	-	91	85.496	ENSHBUG00000006134	pabpc1l	61	85.496	Haplochromis_burtoni
ENSCPBG00000007810	-	83	78.788	ENSHGLG00000008434	PABPC1L	53	78.788	Heterocephalus_glaber_female
ENSCPBG00000007810	-	79	90.698	ENSHGLG00100019506	-	72	90.698	Heterocephalus_glaber_male
ENSCPBG00000007810	-	83	78.788	ENSHGLG00100012151	PABPC1L	53	78.788	Heterocephalus_glaber_male
ENSCPBG00000007810	-	91	81.679	ENSHCOG00000009270	pabpc1l	60	81.679	Hippocampus_comes
ENSCPBG00000007810	-	72	65.254	ENSIPUG00000006780	-	57	65.254	Ictalurus_punctatus
ENSCPBG00000007810	-	83	89.076	ENSIPUG00000012602	pabpc1l	55	89.076	Ictalurus_punctatus
ENSCPBG00000007810	-	72	65.254	ENSIPUG00000006760	-	59	65.254	Ictalurus_punctatus
ENSCPBG00000007810	-	83	79.545	ENSSTOG00000003739	PABPC1L	60	79.545	Ictidomys_tridecemlineatus
ENSCPBG00000007810	-	81	38.889	ENSJJAG00000022406	Pabpc1l	55	38.889	Jaculus_jaculus
ENSCPBG00000007810	-	91	84.733	ENSKMAG00000016847	pabpc1l	61	84.733	Kryptolebias_marmoratus
ENSCPBG00000007810	-	91	88.235	ENSLBEG00000010084	pabpc1l	57	88.235	Labrus_bergylta
ENSCPBG00000007810	-	94	84.328	ENSLACG00000005762	PABPC1L	64	84.328	Latimeria_chalumnae
ENSCPBG00000007810	-	94	82.090	ENSLOCG00000007519	pabpc1l	55	82.090	Lepisosteus_oculatus
ENSCPBG00000007810	-	83	80.303	ENSLAFG00000003553	PABPC1L	53	80.303	Loxodonta_africana
ENSCPBG00000007810	-	83	79.545	ENSMFAG00000040365	PABPC1L	54	79.545	Macaca_fascicularis
ENSCPBG00000007810	-	81	79.545	ENSMNEG00000032298	PABPC1L	53	79.545	Macaca_nemestrina
ENSCPBG00000007810	-	83	79.545	ENSMLEG00000043139	PABPC1L	54	79.545	Mandrillus_leucophaeus
ENSCPBG00000007810	-	91	82.443	ENSMAMG00000011854	pabpc1l	56	82.443	Mastacembelus_armatus
ENSCPBG00000007810	-	91	90.756	ENSMZEG00005023713	pabpc1l	55	85.496	Maylandia_zebra
ENSCPBG00000007810	-	96	83.582	ENSMGAG00000003674	PABPC1L	56	83.582	Meleagris_gallopavo
ENSCPBG00000007810	-	81	74.242	ENSMOCG00000013186	Pabpc1l	62	74.242	Microtus_ochrogaster
ENSCPBG00000007810	-	91	83.969	ENSMMOG00000020574	-	56	88.889	Mola_mola
ENSCPBG00000007810	-	81	81.061	ENSMODG00000016198	PABPC1L	56	81.061	Monodelphis_domestica
ENSCPBG00000007810	-	91	86.555	ENSMALG00000021622	pabpc1l	57	86.555	Monopterus_albus
ENSCPBG00000007810	-	81	75.000	MGP_CAROLIEiJ_G0024627	Pabpc1l	54	75.000	Mus_caroli
ENSCPBG00000007810	-	81	75.000	ENSMUSG00000054582	Pabpc1l	54	75.000	Mus_musculus
ENSCPBG00000007810	-	81	75.000	MGP_PahariEiJ_G0026071	Pabpc1l	54	75.000	Mus_pahari
ENSCPBG00000007810	-	81	75.000	MGP_SPRETEiJ_G0025549	Pabpc1l	54	75.000	Mus_spretus
ENSCPBG00000007810	-	81	81.061	ENSMPUG00000017646	PABPC1L	53	81.061	Mustela_putorius_furo
ENSCPBG00000007810	-	81	76.515	ENSMLUG00000006324	PABPC1L	52	76.515	Myotis_lucifugus
ENSCPBG00000007810	-	81	74.242	ENSNGAG00000010458	Pabpc1l	54	74.242	Nannospalax_galili
ENSCPBG00000007810	-	91	85.496	ENSNBRG00000016633	pabpc1l	69	85.496	Neolamprologus_brichardi
ENSCPBG00000007810	-	81	78.788	ENSMEUG00000007905	-	54	78.788	Notamacropus_eugenii
ENSCPBG00000007810	-	81	79.545	ENSOPRG00000011846	PABPC1L	53	79.545	Ochotona_princeps
ENSCPBG00000007810	-	83	79.545	ENSODEG00000015482	PABPC1L	61	79.545	Octodon_degus
ENSCPBG00000007810	-	68	97.297	ENSODEG00000002920	-	70	97.297	Octodon_degus
ENSCPBG00000007810	-	83	85.496	ENSONIG00000017314	pabpc1l	53	85.496	Oreochromis_niloticus
ENSCPBG00000007810	-	81	81.061	ENSOCUG00000003005	PABPC1L	51	81.061	Oryctolagus_cuniculus
ENSCPBG00000007810	-	91	84.733	ENSORLG00000010322	pabpc1l	69	84.733	Oryzias_latipes
ENSCPBG00000007810	-	91	84.733	ENSORLG00020021193	pabpc1l	69	84.733	Oryzias_latipes_hni
ENSCPBG00000007810	-	91	84.733	ENSORLG00015017018	pabpc1l	69	84.733	Oryzias_latipes_hsok
ENSCPBG00000007810	-	91	89.916	ENSOMEG00000010789	pabpc1l	57	89.916	Oryzias_melastigma
ENSCPBG00000007810	-	94	79.389	ENSOGAG00000032999	PABPC1L	56	79.389	Otolemur_garnettii
ENSCPBG00000007810	-	83	81.679	ENSOARG00000004578	PABPC1L	54	81.679	Ovis_aries
ENSCPBG00000007810	-	81	78.788	ENSPPAG00000039677	PABPC1L	54	78.788	Pan_paniscus
ENSCPBG00000007810	-	81	79.545	ENSPPRG00000019327	-	70	79.545	Panthera_pardus
ENSCPBG00000007810	-	81	79.545	ENSPTIG00000006524	PABPC1L	54	79.545	Panthera_tigris_altaica
ENSCPBG00000007810	-	81	78.788	ENSPTRG00000013531	PABPC1L	68	78.788	Pan_troglodytes
ENSCPBG00000007810	-	83	79.545	ENSPANG00000018788	PABPC1L	54	79.545	Papio_anubis
ENSCPBG00000007810	-	73	92.683	ENSPKIG00000016810	-	86	92.683	Paramormyrops_kingsleyae
ENSCPBG00000007810	-	91	75.000	ENSPKIG00000007322	pabpc1l	58	75.000	Paramormyrops_kingsleyae
ENSCPBG00000007810	-	83	82.836	ENSPSIG00000013289	PABPC1L	78	82.836	Pelodiscus_sinensis
ENSCPBG00000007810	-	67	34.545	ENSPMGG00000023121	-	51	34.545	Periophthalmus_magnuspinnatus
ENSCPBG00000007810	-	85	77.027	ENSPMGG00000023117	pabpc1l	58	85.542	Periophthalmus_magnuspinnatus
ENSCPBG00000007810	-	83	74.242	ENSPEMG00000020671	Pabpc1l	62	74.242	Peromyscus_maniculatus_bairdii
ENSCPBG00000007810	-	83	84.733	ENSPFOG00000013241	pabpc1l	54	84.733	Poecilia_formosa
ENSCPBG00000007810	-	50	88.889	ENSPLAG00000023686	-	57	88.889	Poecilia_latipinna
ENSCPBG00000007810	-	81	89.916	ENSPLAG00000017490	-	55	89.916	Poecilia_latipinna
ENSCPBG00000007810	-	81	89.916	ENSPMEG00000007677	pabpc1l	55	89.916	Poecilia_mexicana
ENSCPBG00000007810	-	50	88.889	ENSPMEG00000009185	-	55	88.889	Poecilia_mexicana
ENSCPBG00000007810	-	91	84.733	ENSPREG00000015886	pabpc1l	83	84.733	Poecilia_reticulata
ENSCPBG00000007810	-	81	78.788	ENSPPYG00000011042	PABPC1L	54	78.788	Pongo_abelii
ENSCPBG00000007810	-	96	79.389	ENSPCOG00000020630	PABPC1L	57	79.389	Propithecus_coquereli
ENSCPBG00000007810	-	81	79.545	ENSPVAG00000012663	PABPC1L	52	79.545	Pteropus_vampyrus
ENSCPBG00000007810	-	91	85.496	ENSPNYG00000004101	pabpc1l	69	85.496	Pundamilia_nyererei
ENSCPBG00000007810	-	81	83.594	ENSPNAG00000021248	pabpc1l	50	83.594	Pygocentrus_nattereri
ENSCPBG00000007810	-	81	73.485	ENSRNOG00000012750	Pabpc1l	54	73.485	Rattus_norvegicus
ENSCPBG00000007810	-	83	78.788	ENSRBIG00000035381	PABPC1L	54	78.788	Rhinopithecus_bieti
ENSCPBG00000007810	-	83	78.030	ENSRROG00000044498	PABPC1L	54	78.030	Rhinopithecus_roxellana
ENSCPBG00000007810	-	83	80.769	ENSSBOG00000009532	-	54	80.769	Saimiri_boliviensis_boliviensis
ENSCPBG00000007810	-	83	69.811	ENSSHAG00000011446	PABPC1L	52	69.811	Sarcophilus_harrisii
ENSCPBG00000007810	-	82	82.836	ENSSFOG00015017304	pabpc1l	52	82.836	Scleropages_formosus
ENSCPBG00000007810	-	91	82.443	ENSSMAG00000010516	pabpc1l	63	82.759	Scophthalmus_maximus
ENSCPBG00000007810	-	83	88.235	ENSSDUG00000014743	pabpc1l	55	88.235	Seriola_dumerili
ENSCPBG00000007810	-	91	83.206	ENSSLDG00000006981	pabpc1l	65	83.206	Seriola_lalandi_dorsalis
ENSCPBG00000007810	-	94	82.090	ENSSPUG00000004233	PABPC1L	55	82.090	Sphenodon_punctatus
ENSCPBG00000007810	-	81	82.443	ENSSPAG00000017137	pabpc1l	59	82.443	Stegastes_partitus
ENSCPBG00000007810	-	83	79.545	ENSSSCG00000007382	PABPC1L	54	79.545	Sus_scrofa
ENSCPBG00000007810	-	94	84.091	ENSTGUG00000005114	PABPC1L	54	84.091	Taeniopygia_guttata
ENSCPBG00000007810	-	83	83.969	ENSTRUG00000011085	pabpc1l	54	83.969	Takifugu_rubripes
ENSCPBG00000007810	-	81	75.000	ENSTNIG00000017903	pabpc1l	52	75.000	Tetraodon_nigroviridis
ENSCPBG00000007810	-	83	81.538	ENSTTRG00000007618	PABPC1L	55	81.538	Tursiops_truncatus
ENSCPBG00000007810	-	81	81.061	ENSUAMG00000017682	PABPC1L	56	81.061	Ursus_americanus
ENSCPBG00000007810	-	81	78.049	ENSUMAG00000025436	PABPC1L	81	78.049	Ursus_maritimus
ENSCPBG00000007810	-	80	80.916	ENSVVUG00000018939	PABPC1L	54	80.916	Vulpes_vulpes
ENSCPBG00000007810	-	94	84.733	ENSXETG00000022831	pabpc1l	55	84.733	Xenopus_tropicalis
ENSCPBG00000007810	-	91	84.733	ENSXCOG00000005459	pabpc1l	67	84.733	Xiphophorus_couchianus
ENSCPBG00000007810	-	81	89.916	ENSXMAG00000017135	pabpc1l	55	89.916	Xiphophorus_maculatus