EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000007878 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Minus strand
Length: 1179 bases
Position: chr1:47585716-47586894
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000010231	RVT_1	PF00078.27	3.9e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000012287	-	1179	-	ENSCPBP00000010231	392 (aa)	-	-

Gene Model

Click here to download ENSCPBG00000007878's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000007878's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000007878	-	85	38.824	ENSCPBG00000001785	-	97	38.824
ENSCPBG00000007878	-	60	37.083	ENSCPBG00000003218	-	96	37.083
ENSCPBG00000007878	-	53	41.905	ENSCPBG00000001576	-	85	41.905
ENSCPBG00000007878	-	92	92.201	ENSCPBG00000000566	-	99	92.201
ENSCPBG00000007878	-	55	41.860	ENSCPBG00000003125	-	88	41.860

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000007878	-	97	31.726	ENSAOCG00000007213	-	97	31.726	Amphiprion_ocellaris
ENSCPBG00000007878	-	92	32.880	ENSAOCG00000018056	-	92	32.880	Amphiprion_ocellaris
ENSCPBG00000007878	-	91	32.425	ENSAPEG00000018159	-	94	32.425	Amphiprion_percula
ENSCPBG00000007878	-	93	32.708	ENSAPEG00000011105	-	91	32.708	Amphiprion_percula
ENSCPBG00000007878	-	92	31.926	ENSAPEG00000022903	-	92	31.926	Amphiprion_percula
ENSCPBG00000007878	-	88	30.748	ENSAPEG00000021165	-	88	30.748	Amphiprion_percula
ENSCPBG00000007878	-	92	32.973	ENSAPEG00000020818	-	92	32.973	Amphiprion_percula
ENSCPBG00000007878	-	90	33.799	ENSAPEG00000018088	-	87	33.799	Amphiprion_percula
ENSCPBG00000007878	-	93	33.243	ENSAPEG00000017986	-	92	33.243	Amphiprion_percula
ENSCPBG00000007878	-	92	32.973	ENSAPEG00000018062	-	92	32.973	Amphiprion_percula
ENSCPBG00000007878	-	63	39.024	ENSAPEG00000022045	-	67	39.024	Amphiprion_percula
ENSCPBG00000007878	-	91	34.828	ENSATEG00000004130	-	95	34.828	Anabas_testudineus
ENSCPBG00000007878	-	88	31.461	ENSATEG00000022267	-	89	31.461	Anabas_testudineus
ENSCPBG00000007878	-	97	34.653	ENSATEG00000020541	-	95	34.653	Anabas_testudineus
ENSCPBG00000007878	-	100	33.649	ENSATEG00000001648	-	93	33.649	Anabas_testudineus
ENSCPBG00000007878	-	89	34.595	ENSATEG00000022553	-	100	34.595	Anabas_testudineus
ENSCPBG00000007878	-	98	34.719	ENSATEG00000002616	-	99	34.719	Anabas_testudineus
ENSCPBG00000007878	-	96	34.422	ENSATEG00000010702	-	96	34.422	Anabas_testudineus
ENSCPBG00000007878	-	99	30.318	ENSATEG00000012596	-	99	30.318	Anabas_testudineus
ENSCPBG00000007878	-	96	34.250	ENSATEG00000021223	-	92	34.250	Anabas_testudineus
ENSCPBG00000007878	-	50	32.828	ENSACLG00000000602	-	68	32.828	Astatotilapia_calliptera
ENSCPBG00000007878	-	60	38.819	ENSAMXG00000039759	-	53	38.819	Astyanax_mexicanus
ENSCPBG00000007878	-	90	39.377	ENSBTAG00000050818	-	91	39.377	Bos_taurus
ENSCPBG00000007878	-	60	45.492	ENSCHIG00000023099	-	93	45.492	Capra_hircus
ENSCPBG00000007878	-	62	39.344	ENSEBUG00000000330	-	99	39.344	Eptatretus_burgeri
ENSCPBG00000007878	-	63	37.097	ENSELUG00000000455	-	79	37.097	Esox_lucius
ENSCPBG00000007878	-	85	46.041	ENSFALG00000000112	-	96	46.784	Ficedula_albicollis
ENSCPBG00000007878	-	73	43.253	ENSFDAG00000018675	-	68	43.253	Fukomys_damarensis
ENSCPBG00000007878	-	77	89.286	ENSGAGG00000007019	-	94	89.286	Gopherus_agassizii
ENSCPBG00000007878	-	77	84.488	ENSGAGG00000008751	-	100	84.488	Gopherus_agassizii
ENSCPBG00000007878	-	92	77.008	ENSGAGG00000006697	-	89	77.008	Gopherus_agassizii
ENSCPBG00000007878	-	58	40.000	ENSHBUG00000019642	-	58	40.000	Haplochromis_burtoni
ENSCPBG00000007878	-	65	34.902	ENSIPUG00000004466	-	63	34.902	Ictalurus_punctatus
ENSCPBG00000007878	-	85	32.222	ENSIPUG00000008898	-	84	32.222	Ictalurus_punctatus
ENSCPBG00000007878	-	83	31.437	ENSLBEG00000016646	-	83	31.437	Labrus_bergylta
ENSCPBG00000007878	-	96	30.000	ENSLBEG00000021481	-	91	30.000	Labrus_bergylta
ENSCPBG00000007878	-	95	30.481	ENSLBEG00000011884	-	83	30.481	Labrus_bergylta
ENSCPBG00000007878	-	91	45.699	ENSMMUG00000048335	-	74	45.699	Macaca_mulatta
ENSCPBG00000007878	-	79	45.679	ENSMMUG00000046725	-	95	45.679	Macaca_mulatta
ENSCPBG00000007878	-	58	37.391	ENSMAMG00000005141	-	56	37.391	Mastacembelus_armatus
ENSCPBG00000007878	-	58	37.391	ENSMAMG00000017258	-	55	37.391	Mastacembelus_armatus
ENSCPBG00000007878	-	91	33.607	ENSMAMG00000009166	-	86	33.607	Mastacembelus_armatus
ENSCPBG00000007878	-	91	33.880	ENSMODG00000028146	-	72	33.880	Monodelphis_domestica
ENSCPBG00000007878	-	91	33.880	ENSMODG00000029588	-	90	33.880	Monodelphis_domestica
ENSCPBG00000007878	-	78	32.716	ENSMODG00000002894	-	98	32.716	Monodelphis_domestica
ENSCPBG00000007878	-	91	33.880	ENSMODG00000029572	-	74	33.880	Monodelphis_domestica
ENSCPBG00000007878	-	91	33.880	ENSMODG00000028270	-	98	33.880	Monodelphis_domestica
ENSCPBG00000007878	-	100	34.146	ENSMODG00000028332	-	86	34.146	Monodelphis_domestica
ENSCPBG00000007878	-	94	37.968	ENSMODG00000027501	-	53	37.968	Monodelphis_domestica
ENSCPBG00000007878	-	91	33.880	ENSMODG00000028946	-	97	33.880	Monodelphis_domestica
ENSCPBG00000007878	-	50	39.409	ENSMODG00000029191	-	72	39.409	Monodelphis_domestica
ENSCPBG00000007878	-	82	35.045	ENSMODG00000029165	-	95	35.045	Monodelphis_domestica
ENSCPBG00000007878	-	97	38.384	ENSMODG00000029150	-	99	38.384	Monodelphis_domestica
ENSCPBG00000007878	-	76	33.550	ENSMODG00000029390	-	51	33.550	Monodelphis_domestica
ENSCPBG00000007878	-	100	34.793	ENSMODG00000029778	-	63	34.793	Monodelphis_domestica
ENSCPBG00000007878	-	72	34.708	ENSMODG00000027965	-	65	34.708	Monodelphis_domestica
ENSCPBG00000007878	-	76	33.770	ENSMODG00000028620	-	98	33.770	Monodelphis_domestica
ENSCPBG00000007878	-	82	33.739	ENSMODG00000029251	-	99	33.739	Monodelphis_domestica
ENSCPBG00000007878	-	66	33.708	ENSMODG00000029389	-	100	33.708	Monodelphis_domestica
ENSCPBG00000007878	-	80	33.956	ENSMODG00000027715	-	83	33.956	Monodelphis_domestica
ENSCPBG00000007878	-	91	33.880	ENSMODG00000028171	-	85	33.880	Monodelphis_domestica
ENSCPBG00000007878	-	87	34.000	ENSMODG00000029539	-	99	34.000	Monodelphis_domestica
ENSCPBG00000007878	-	72	34.021	ENSMODG00000029114	-	99	34.021	Monodelphis_domestica
ENSCPBG00000007878	-	91	33.333	ENSMODG00000029538	-	94	33.333	Monodelphis_domestica
ENSCPBG00000007878	-	71	32.639	ENSMODG00000029535	-	99	32.394	Monodelphis_domestica
ENSCPBG00000007878	-	60	36.402	ENSMALG00000008425	-	71	36.402	Monopterus_albus
ENSCPBG00000007878	-	85	32.081	ENSMALG00000003136	-	96	32.081	Monopterus_albus
ENSCPBG00000007878	-	93	32.461	ENSORLG00000024655	-	90	32.461	Oryzias_latipes
ENSCPBG00000007878	-	93	33.333	ENSORLG00000026063	-	98	33.333	Oryzias_latipes
ENSCPBG00000007878	-	93	33.246	ENSORLG00020000097	-	90	33.246	Oryzias_latipes_hni
ENSCPBG00000007878	-	59	39.076	ENSOMEG00000012804	-	70	39.076	Oryzias_melastigma
ENSCPBG00000007878	-	96	32.178	ENSOMEG00000000861	-	83	32.178	Oryzias_melastigma
ENSCPBG00000007878	-	78	42.056	ENSOARG00000004479	-	75	42.056	Ovis_aries
ENSCPBG00000007878	-	64	47.451	ENSPTIG00000005297	-	86	47.451	Panthera_tigris_altaica
ENSCPBG00000007878	-	89	42.570	ENSPKIG00000002864	-	53	42.570	Paramormyrops_kingsleyae
ENSCPBG00000007878	-	83	40.351	ENSPKIG00000010196	-	57	40.351	Paramormyrops_kingsleyae
ENSCPBG00000007878	-	84	39.118	ENSPSIG00000000051	-	94	39.118	Pelodiscus_sinensis
ENSCPBG00000007878	-	60	34.034	ENSPMGG00000024049	-	71	34.034	Periophthalmus_magnuspinnatus
ENSCPBG00000007878	-	91	32.123	ENSPNAG00000015817	-	92	32.123	Pygocentrus_nattereri
ENSCPBG00000007878	-	85	31.322	ENSPNAG00000001571	-	82	31.322	Pygocentrus_nattereri
ENSCPBG00000007878	-	60	37.712	ENSPNAG00000003082	-	76	37.712	Pygocentrus_nattereri
ENSCPBG00000007878	-	93	31.234	ENSPNAG00000024551	-	79	31.234	Pygocentrus_nattereri
ENSCPBG00000007878	-	73	32.119	ENSPNAG00000029154	-	100	32.119	Pygocentrus_nattereri
ENSCPBG00000007878	-	92	31.768	ENSPNAG00000021668	-	83	31.768	Pygocentrus_nattereri
ENSCPBG00000007878	-	92	30.504	ENSPNAG00000024323	-	89	30.504	Pygocentrus_nattereri
ENSCPBG00000007878	-	61	38.017	ENSSLDG00000020897	-	62	38.017	Seriola_lalandi_dorsalis
ENSCPBG00000007878	-	65	43.750	ENSSLDG00000003339	-	51	43.750	Seriola_lalandi_dorsalis
ENSCPBG00000007878	-	76	33.754	ENSTRUG00000021793	-	99	33.754	Takifugu_rubripes
ENSCPBG00000007878	-	96	33.418	ENSXCOG00000008944	-	84	33.418	Xiphophorus_couchianus
ENSCPBG00000007878	-	92	33.690	ENSXMAG00000026283	-	97	33.690	Xiphophorus_maculatus