EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCPBG00000008216 (Gene tree)
Gene ID: 101951241
Gene Symbol: PRPF3
Alias: Prp3|RP18|SNRNP90|hPrp3
Full Name: pre-mRNA processing factor 3
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Plus strand
Length: 22334 bases
Position: chrKK082960.1:1500378-1522711
Accession: 17348
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000010721	PRP3	PF08572.10	1.2e-79	1	1
ENSCPBP00000010721	PWI	PF01480.17	4.3e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000012870	PRPF3-201	2760	-	ENSCPBP00000010721	684 (aa)	XP_005293730	UPI000388A616

Gene Model

Click here to download ENSCPBG00000008216's gene model file

Pathways

Pathway ID	Pathway Name	Source
cpic03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000008216's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000008216	PRPF3	100	96.345	ENSG00000117360	PRPF3	100	96.345	Homo_sapiens
ENSCPBG00000008216	PRPF3	100	72.458	ENSAPOG00000015584	prpf3	99	73.023	Acanthochromis_polyacanthus
ENSCPBG00000008216	PRPF3	100	96.199	ENSAMEG00000001630	PRPF3	100	96.199	Ailuropoda_melanoleuca
ENSCPBG00000008216	PRPF3	100	72.458	ENSACIG00000007876	prpf3	99	71.469	Amphilophus_citrinellus
ENSCPBG00000008216	PRPF3	100	71.751	ENSAOCG00000011449	prpf3	99	72.973	Amphiprion_ocellaris
ENSCPBG00000008216	PRPF3	100	71.937	ENSATEG00000023583	prpf3	99	72.365	Anabas_testudineus
ENSCPBG00000008216	PRPF3	100	96.491	ENSAPLG00000002440	PRPF3	100	96.491	Anas_platyrhynchos
ENSCPBG00000008216	PRPF3	100	93.013	ENSACAG00000003176	PRPF3	100	93.304	Anolis_carolinensis
ENSCPBG00000008216	PRPF3	100	96.345	ENSANAG00000026138	PRPF3	100	96.345	Aotus_nancymaae
ENSCPBG00000008216	PRPF3	100	72.832	ENSACLG00000020127	prpf3	99	72.543	Astatotilapia_calliptera
ENSCPBG00000008216	PRPF3	100	74.648	ENSAMXG00000007306	prpf3	99	74.225	Astyanax_mexicanus
ENSCPBG00000008216	PRPF3	100	96.345	ENSBTAG00000013946	PRPF3	100	96.345	Bos_taurus
ENSCPBG00000008216	PRPF3	81	39.016	WBGene00010844	prp-3	95	36.622	Caenorhabditis_elegans
ENSCPBG00000008216	PRPF3	100	96.345	ENSCJAG00000009926	PRPF3	100	96.345	Callithrix_jacchus
ENSCPBG00000008216	PRPF3	100	96.345	ENSCAFG00000011820	PRPF3	100	96.345	Canis_familiaris
ENSCPBG00000008216	PRPF3	80	96.168	ENSCAFG00020019653	PRPF3	100	96.168	Canis_lupus_dingo
ENSCPBG00000008216	PRPF3	100	96.345	ENSCHIG00000015434	PRPF3	100	96.345	Capra_hircus
ENSCPBG00000008216	PRPF3	100	96.491	ENSTSYG00000001383	PRPF3	100	96.491	Carlito_syrichta
ENSCPBG00000008216	PRPF3	93	79.906	ENSCAPG00000017812	PRPF3	95	80.220	Cavia_aperea
ENSCPBG00000008216	PRPF3	100	96.199	ENSCPOG00000008068	PRPF3	100	96.199	Cavia_porcellus
ENSCPBG00000008216	PRPF3	100	96.345	ENSCCAG00000026380	PRPF3	100	96.345	Cebus_capucinus
ENSCPBG00000008216	PRPF3	100	81.422	ENSCATG00000041778	PRPF3	100	81.422	Cercocebus_atys
ENSCPBG00000008216	PRPF3	100	96.199	ENSCLAG00000015009	PRPF3	100	96.199	Chinchilla_lanigera
ENSCPBG00000008216	PRPF3	76	96.751	ENSCHOG00000011645	PRPF3	76	96.751	Choloepus_hoffmanni
ENSCPBG00000008216	PRPF3	61	58.670	ENSCING00000003312	-	99	58.095	Ciona_intestinalis
ENSCPBG00000008216	PRPF3	83	54.116	ENSCSAVG00000008720	-	94	54.955	Ciona_savignyi
ENSCPBG00000008216	PRPF3	100	95.614	ENSCANG00000036769	PRPF3	100	95.614	Colobus_angolensis_palliatus
ENSCPBG00000008216	PRPF3	100	96.345	ENSCGRG00001019100	Prpf3	100	96.345	Cricetulus_griseus_chok1gshd
ENSCPBG00000008216	PRPF3	100	96.345	ENSCGRG00000007322	Prpf3	100	96.345	Cricetulus_griseus_crigri
ENSCPBG00000008216	PRPF3	100	72.293	ENSCSEG00000002532	prpf3	99	71.589	Cynoglossus_semilaevis
ENSCPBG00000008216	PRPF3	100	73.333	ENSCVAG00000009318	prpf3	99	72.908	Cyprinodon_variegatus
ENSCPBG00000008216	PRPF3	100	73.796	ENSDARG00000086425	prpf3	99	73.115	Danio_rerio
ENSCPBG00000008216	PRPF3	100	86.696	ENSDNOG00000005904	PRPF3	100	89.181	Dasypus_novemcinctus
ENSCPBG00000008216	PRPF3	93	95.906	ENSDORG00000008664	Prpf3	100	95.906	Dipodomys_ordii
ENSCPBG00000008216	PRPF3	81	53.427	FBgn0036915	Prp3	99	53.623	Drosophila_melanogaster
ENSCPBG00000008216	PRPF3	100	95.322	ENSETEG00000019124	PRPF3	100	95.322	Echinops_telfairi
ENSCPBG00000008216	PRPF3	100	63.934	ENSEBUG00000011680	prpf3	99	63.798	Eptatretus_burgeri
ENSCPBG00000008216	PRPF3	100	96.199	ENSEASG00005001566	PRPF3	100	96.199	Equus_asinus_asinus
ENSCPBG00000008216	PRPF3	100	96.345	ENSECAG00000019840	PRPF3	100	96.345	Equus_caballus
ENSCPBG00000008216	PRPF3	85	96.454	ENSEEUG00000007338	PRPF3	85	96.454	Erinaceus_europaeus
ENSCPBG00000008216	PRPF3	100	66.667	ENSELUG00000013624	prpf3	99	67.094	Esox_lucius
ENSCPBG00000008216	PRPF3	100	96.345	ENSFCAG00000013940	PRPF3	100	96.345	Felis_catus
ENSCPBG00000008216	PRPF3	100	95.760	ENSFDAG00000010365	PRPF3	100	95.760	Fukomys_damarensis
ENSCPBG00000008216	PRPF3	100	73.563	ENSFHEG00000021746	prpf3	99	73.276	Fundulus_heteroclitus
ENSCPBG00000008216	PRPF3	100	71.711	ENSGMOG00000008535	prpf3	99	71.570	Gadus_morhua
ENSCPBG00000008216	PRPF3	100	96.637	ENSGALG00000028205	PRPF3	100	96.637	Gallus_gallus
ENSCPBG00000008216	PRPF3	100	72.206	ENSGAFG00000012671	prpf3	99	71.920	Gambusia_affinis
ENSCPBG00000008216	PRPF3	100	71.388	ENSGACG00000011792	prpf3	99	71.671	Gasterosteus_aculeatus
ENSCPBG00000008216	PRPF3	100	99.708	ENSGAGG00000013765	PRPF3	100	99.636	Gopherus_agassizii
ENSCPBG00000008216	PRPF3	86	96.748	ENSGGOG00000013174	PRPF3	100	96.748	Gorilla_gorilla
ENSCPBG00000008216	PRPF3	100	73.121	ENSHBUG00000003493	prpf3	99	72.832	Haplochromis_burtoni
ENSCPBG00000008216	PRPF3	100	95.906	ENSHGLG00000016569	PRPF3	100	95.906	Heterocephalus_glaber_female
ENSCPBG00000008216	PRPF3	100	68.421	ENSHGLG00000016033	-	100	68.567	Heterocephalus_glaber_female
ENSCPBG00000008216	PRPF3	100	95.906	ENSHGLG00100007590	PRPF3	100	95.906	Heterocephalus_glaber_male
ENSCPBG00000008216	PRPF3	100	68.421	ENSHGLG00100008951	-	100	67.982	Heterocephalus_glaber_male
ENSCPBG00000008216	PRPF3	100	68.990	ENSHCOG00000014058	prpf3	99	68.706	Hippocampus_comes
ENSCPBG00000008216	PRPF3	100	73.571	ENSIPUG00000000902	PRPF3	99	73.857	Ictalurus_punctatus
ENSCPBG00000008216	PRPF3	100	96.345	ENSSTOG00000001889	PRPF3	100	96.345	Ictidomys_tridecemlineatus
ENSCPBG00000008216	PRPF3	100	71.693	ENSKMAG00000001390	prpf3	99	71.408	Kryptolebias_marmoratus
ENSCPBG00000008216	PRPF3	100	71.429	ENSLBEG00000026310	prpf3	99	71.711	Labrus_bergylta
ENSCPBG00000008216	PRPF3	93	82.418	ENSLACG00000010541	PRPF3	100	82.575	Latimeria_chalumnae
ENSCPBG00000008216	PRPF3	100	96.345	ENSLAFG00000004713	PRPF3	100	96.345	Loxodonta_africana
ENSCPBG00000008216	PRPF3	100	96.345	ENSMFAG00000039791	PRPF3	100	96.345	Macaca_fascicularis
ENSCPBG00000008216	PRPF3	90	96.423	ENSMMUG00000016301	PRPF3	98	96.417	Macaca_mulatta
ENSCPBG00000008216	PRPF3	100	96.345	ENSMNEG00000038161	PRPF3	100	96.345	Macaca_nemestrina
ENSCPBG00000008216	PRPF3	86	96.341	ENSMLEG00000040609	PRPF3	100	96.341	Mandrillus_leucophaeus
ENSCPBG00000008216	PRPF3	99	65.685	ENSMLEG00000041065	-	98	65.538	Mandrillus_leucophaeus
ENSCPBG00000008216	PRPF3	100	72.663	ENSMAMG00000014968	prpf3	99	72.521	Mastacembelus_armatus
ENSCPBG00000008216	PRPF3	100	71.208	ENSMZEG00005015970	prpf3	99	71.067	Maylandia_zebra
ENSCPBG00000008216	PRPF3	100	96.637	ENSMGAG00000000707	PRPF3	100	96.637	Meleagris_gallopavo
ENSCPBG00000008216	PRPF3	100	96.053	ENSMAUG00000017112	Prpf3	100	96.053	Mesocricetus_auratus
ENSCPBG00000008216	PRPF3	100	96.345	ENSMICG00000015386	PRPF3	100	96.345	Microcebus_murinus
ENSCPBG00000008216	PRPF3	100	96.345	ENSMOCG00000000242	Prpf3	100	96.345	Microtus_ochrogaster
ENSCPBG00000008216	PRPF3	100	67.139	ENSMMOG00000016131	prpf3	99	67.660	Mola_mola
ENSCPBG00000008216	PRPF3	100	96.491	ENSMODG00000018774	PRPF3	100	96.491	Monodelphis_domestica
ENSCPBG00000008216	PRPF3	100	71.184	ENSMALG00000007257	prpf3	99	71.041	Monopterus_albus
ENSCPBG00000008216	PRPF3	100	96.199	MGP_CAROLIEiJ_G0025354	Prpf3	100	96.199	Mus_caroli
ENSCPBG00000008216	PRPF3	100	96.199	ENSMUSG00000015748	Prpf3	100	96.199	Mus_musculus
ENSCPBG00000008216	PRPF3	100	96.053	MGP_PahariEiJ_G0026798	Prpf3	100	96.053	Mus_pahari
ENSCPBG00000008216	PRPF3	100	96.199	MGP_SPRETEiJ_G0026298	Prpf3	100	96.199	Mus_spretus
ENSCPBG00000008216	PRPF3	100	93.713	ENSMPUG00000005080	PRPF3	100	93.723	Mustela_putorius_furo
ENSCPBG00000008216	PRPF3	100	95.766	ENSMLUG00000004646	-	100	95.766	Myotis_lucifugus
ENSCPBG00000008216	PRPF3	100	96.345	ENSNGAG00000000910	Prpf3	100	96.345	Nannospalax_galili
ENSCPBG00000008216	PRPF3	100	70.909	ENSNBRG00000003462	prpf3	99	70.629	Neolamprologus_brichardi
ENSCPBG00000008216	PRPF3	90	96.423	ENSNLEG00000009841	PRPF3	100	96.423	Nomascus_leucogenys
ENSCPBG00000008216	PRPF3	83	98.230	ENSMEUG00000008733	PRPF3	89	98.230	Notamacropus_eugenii
ENSCPBG00000008216	PRPF3	100	95.906	ENSOPRG00000010139	PRPF3	100	95.906	Ochotona_princeps
ENSCPBG00000008216	PRPF3	100	71.491	ENSODEG00000014412	-	100	71.491	Octodon_degus
ENSCPBG00000008216	PRPF3	100	95.906	ENSODEG00000011363	-	100	95.906	Octodon_degus
ENSCPBG00000008216	PRPF3	100	71.208	ENSONIG00000006394	prpf3	99	71.067	Oreochromis_niloticus
ENSCPBG00000008216	PRPF3	100	64.731	ENSOANG00000015441	PRPF3	100	64.358	Ornithorhynchus_anatinus
ENSCPBG00000008216	PRPF3	100	96.345	ENSOCUG00000011760	PRPF3	100	96.345	Oryctolagus_cuniculus
ENSCPBG00000008216	PRPF3	100	73.077	ENSORLG00000010330	prpf3	99	72.222	Oryzias_latipes
ENSCPBG00000008216	PRPF3	100	73.077	ENSORLG00020009054	prpf3	99	72.222	Oryzias_latipes_hni
ENSCPBG00000008216	PRPF3	100	72.792	ENSORLG00015015016	prpf3	99	71.937	Oryzias_latipes_hsok
ENSCPBG00000008216	PRPF3	100	72.206	ENSOMEG00000000940	prpf3	99	71.920	Oryzias_melastigma
ENSCPBG00000008216	PRPF3	100	90.657	ENSOGAG00000005352	PRPF3	100	90.657	Otolemur_garnettii
ENSCPBG00000008216	PRPF3	100	96.345	ENSOARG00000020798	PRPF3	100	96.345	Ovis_aries
ENSCPBG00000008216	PRPF3	100	96.199	ENSPPAG00000030983	PRPF3	100	96.199	Pan_paniscus
ENSCPBG00000008216	PRPF3	99	73.778	ENSPPAG00000043769	-	99	73.333	Pan_paniscus
ENSCPBG00000008216	PRPF3	100	96.345	ENSPPRG00000000731	PRPF3	100	96.345	Panthera_pardus
ENSCPBG00000008216	PRPF3	100	96.345	ENSPTIG00000005516	PRPF3	100	96.345	Panthera_tigris_altaica
ENSCPBG00000008216	PRPF3	99	72.889	ENSPTRG00000047819	-	99	72.444	Pan_troglodytes
ENSCPBG00000008216	PRPF3	100	96.345	ENSPTRG00000001254	PRPF3	100	96.345	Pan_troglodytes
ENSCPBG00000008216	PRPF3	100	96.199	ENSPANG00000000499	PRPF3	100	96.199	Papio_anubis
ENSCPBG00000008216	PRPF3	100	74.750	ENSPKIG00000010501	prpf3	99	74.893	Paramormyrops_kingsleyae
ENSCPBG00000008216	PRPF3	100	98.830	ENSPSIG00000014877	PRPF3	100	98.830	Pelodiscus_sinensis
ENSCPBG00000008216	PRPF3	100	67.197	ENSPMGG00000007776	prpf3	99	67.341	Periophthalmus_magnuspinnatus
ENSCPBG00000008216	PRPF3	100	96.345	ENSPEMG00000011672	Prpf3	100	96.345	Peromyscus_maniculatus_bairdii
ENSCPBG00000008216	PRPF3	63	72.146	ENSPMAG00000005588	prpf3	99	70.640	Petromyzon_marinus
ENSCPBG00000008216	PRPF3	100	96.491	ENSPCIG00000008795	PRPF3	100	96.491	Phascolarctos_cinereus
ENSCPBG00000008216	PRPF3	100	72.096	ENSPFOG00000013638	prpf3	99	71.853	Poecilia_formosa
ENSCPBG00000008216	PRPF3	100	72.119	ENSPLAG00000018103	prpf3	99	72.286	Poecilia_latipinna
ENSCPBG00000008216	PRPF3	100	72.206	ENSPMEG00000023546	prpf3	99	72.000	Poecilia_mexicana
ENSCPBG00000008216	PRPF3	100	72.000	ENSPREG00000017216	prpf3	99	71.714	Poecilia_reticulata
ENSCPBG00000008216	PRPF3	75	84.854	ENSPPYG00000018646	-	100	84.854	Pongo_abelii
ENSCPBG00000008216	PRPF3	93	96.069	ENSPPYG00000000900	PRPF3	99	96.069	Pongo_abelii
ENSCPBG00000008216	PRPF3	87	95.946	ENSPCAG00000014908	PRPF3	87	95.946	Procavia_capensis
ENSCPBG00000008216	PRPF3	100	96.199	ENSPCOG00000013828	PRPF3	100	96.199	Propithecus_coquereli
ENSCPBG00000008216	PRPF3	100	95.614	ENSPVAG00000013472	PRPF3	100	95.614	Pteropus_vampyrus
ENSCPBG00000008216	PRPF3	100	73.121	ENSPNYG00000004279	prpf3	99	72.832	Pundamilia_nyererei
ENSCPBG00000008216	PRPF3	100	73.803	ENSPNAG00000001799	prpf3	99	73.662	Pygocentrus_nattereri
ENSCPBG00000008216	PRPF3	100	96.345	ENSRNOG00000025629	Prpf3	100	96.345	Rattus_norvegicus
ENSCPBG00000008216	PRPF3	83	93.617	ENSRBIG00000028854	PRPF3	98	93.617	Rhinopithecus_bieti
ENSCPBG00000008216	PRPF3	100	96.345	ENSRROG00000027464	PRPF3	100	96.345	Rhinopithecus_roxellana
ENSCPBG00000008216	PRPF3	100	89.474	ENSSBOG00000033104	PRPF3	100	89.474	Saimiri_boliviensis_boliviensis
ENSCPBG00000008216	PRPF3	100	96.058	ENSSHAG00000009548	PRPF3	100	96.058	Sarcophilus_harrisii
ENSCPBG00000008216	PRPF3	100	73.662	ENSSFOG00015022014	prpf3	99	73.239	Scleropages_formosus
ENSCPBG00000008216	PRPF3	100	72.651	ENSSMAG00000015739	prpf3	99	72.370	Scophthalmus_maximus
ENSCPBG00000008216	PRPF3	100	69.484	ENSSDUG00000006840	prpf3	99	69.484	Seriola_dumerili
ENSCPBG00000008216	PRPF3	100	71.189	ENSSLDG00000015423	prpf3	99	71.608	Seriola_lalandi_dorsalis
ENSCPBG00000008216	PRPF3	100	96.199	ENSSARG00000011064	PRPF3	100	96.199	Sorex_araneus
ENSCPBG00000008216	PRPF3	100	94.092	ENSSPUG00000000809	PRPF3	100	94.092	Sphenodon_punctatus
ENSCPBG00000008216	PRPF3	100	71.730	ENSSPAG00000018721	prpf3	99	72.663	Stegastes_partitus
ENSCPBG00000008216	PRPF3	100	96.345	ENSSSCG00000030119	PRPF3	100	96.345	Sus_scrofa
ENSCPBG00000008216	PRPF3	100	82.336	ENSTGUG00000004552	PRPF3	100	82.336	Taeniopygia_guttata
ENSCPBG00000008216	PRPF3	100	71.367	ENSTRUG00000014923	prpf3	99	71.079	Takifugu_rubripes
ENSCPBG00000008216	PRPF3	100	72.663	ENSTNIG00000008058	prpf3	100	72.057	Tetraodon_nigroviridis
ENSCPBG00000008216	PRPF3	82	96.667	ENSTBEG00000014072	PRPF3	88	96.667	Tupaia_belangeri
ENSCPBG00000008216	PRPF3	100	90.351	ENSTTRG00000010616	PRPF3	100	90.351	Tursiops_truncatus
ENSCPBG00000008216	PRPF3	80	96.175	ENSUAMG00000009345	PRPF3	100	96.175	Ursus_americanus
ENSCPBG00000008216	PRPF3	100	96.345	ENSUMAG00000003720	PRPF3	100	96.345	Ursus_maritimus
ENSCPBG00000008216	PRPF3	89	97.024	ENSVPAG00000005425	PRPF3	89	97.024	Vicugna_pacos
ENSCPBG00000008216	PRPF3	100	96.345	ENSVVUG00000007933	PRPF3	100	96.345	Vulpes_vulpes
ENSCPBG00000008216	PRPF3	100	87.228	ENSXETG00000018654	prpf3	100	87.228	Xenopus_tropicalis
ENSCPBG00000008216	PRPF3	100	71.835	ENSXMAG00000016347	prpf3	99	72.000	Xiphophorus_maculatus