EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPBG00000008390 (Gene tree)
Gene ID: 101939787
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Minus strand
Length: 42681 bases
Position: chrKK083169.1:282840-325520
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000010945	zf-CCCH	PF00642.24	0.00034	1	1
ENSCPBP00000010945	RRM_1	PF00076.22	3.1e-09	1	1
ENSCPBP00000010945	PWI	PF01480.17	1.2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000013144	-	3619	-	ENSCPBP00000010945	1012 (aa)	XP_008173247	UPI00046C3315

Gene Model

Click here to download ENSCPBG00000008390's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000008390's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000008390	-	66	68.120	ENSG00000091009	RBM27	100	72.919	Homo_sapiens
ENSCPBG00000008390	-	91	71.681	ENSAPOG00000000301	rbm27	63	57.241	Acanthochromis_polyacanthus
ENSCPBG00000008390	-	66	68.256	ENSAMEG00000017593	-	100	73.559	Ailuropoda_melanoleuca
ENSCPBG00000008390	-	57	56.355	ENSACIG00000014111	rbm27	55	55.272	Amphilophus_citrinellus
ENSCPBG00000008390	-	76	51.511	ENSAOCG00000016767	rbm27	95	48.494	Amphiprion_ocellaris
ENSCPBG00000008390	-	62	46.792	ENSAOCG00000009289	rbm26	95	46.719	Amphiprion_ocellaris
ENSCPBG00000008390	-	69	79.208	ENSAPEG00000017681	rbm27	57	54.717	Amphiprion_percula
ENSCPBG00000008390	-	89	82.105	ENSATEG00000010385	rbm27	91	54.905	Anabas_testudineus
ENSCPBG00000008390	-	98	78.319	ENSAPLG00000009309	-	100	76.409	Anas_platyrhynchos
ENSCPBG00000008390	-	100	76.438	ENSACAG00000014177	-	100	74.954	Anolis_carolinensis
ENSCPBG00000008390	-	99	71.521	ENSANAG00000034039	-	100	76.590	Aotus_nancymaae
ENSCPBG00000008390	-	77	52.058	ENSACLG00000010782	rbm27	95	51.165	Astatotilapia_calliptera
ENSCPBG00000008390	-	56	46.957	ENSAMXG00000012398	rbm26	96	46.240	Astyanax_mexicanus
ENSCPBG00000008390	-	80	50.751	ENSAMXG00000029605	rbm27	95	50.544	Astyanax_mexicanus
ENSCPBG00000008390	-	100	77.124	ENSBTAG00000011642	RBM27	100	77.510	Bos_taurus
ENSCPBG00000008390	-	99	71.944	ENSCJAG00000021308	-	100	76.538	Callithrix_jacchus
ENSCPBG00000008390	-	66	67.984	ENSCAFG00000006456	-	100	73.193	Canis_familiaris
ENSCPBG00000008390	-	66	67.984	ENSCAFG00020024931	-	99	72.973	Canis_lupus_dingo
ENSCPBG00000008390	-	66	68.529	ENSCHIG00000009045	-	100	73.694	Capra_hircus
ENSCPBG00000008390	-	66	67.847	ENSTSYG00000004303	-	100	72.669	Carlito_syrichta
ENSCPBG00000008390	-	85	83.077	ENSCAPG00000007138	-	89	89.231	Cavia_aperea
ENSCPBG00000008390	-	87	83.077	ENSCPOG00000002498	-	97	89.231	Cavia_porcellus
ENSCPBG00000008390	-	98	72.634	ENSCCAG00000015866	-	100	72.653	Cebus_capucinus
ENSCPBG00000008390	-	98	72.259	ENSCATG00000035545	-	100	72.736	Cercocebus_atys
ENSCPBG00000008390	-	100	76.108	ENSCLAG00000016106	-	100	76.493	Chinchilla_lanigera
ENSCPBG00000008390	-	66	67.847	ENSCSAG00000012270	-	100	72.644	Chlorocebus_sabaeus
ENSCPBG00000008390	-	75	90.323	ENSCHOG00000002831	-	82	90.323	Choloepus_hoffmanni
ENSCPBG00000008390	-	54	47.826	ENSCHOG00000000529	RBM26	74	45.289	Choloepus_hoffmanni
ENSCPBG00000008390	-	66	64.103	ENSCING00000003516	zf(c3h)-9	58	64.103	Ciona_intestinalis
ENSCPBG00000008390	-	99	70.699	ENSCANG00000040932	-	100	71.947	Colobus_angolensis_palliatus
ENSCPBG00000008390	-	98	87.066	ENSCGRG00001018200	Rbm27	100	73.481	Cricetulus_griseus_chok1gshd
ENSCPBG00000008390	-	66	72.368	ENSCGRG00000006403	Rbm27	100	75.442	Cricetulus_griseus_crigri
ENSCPBG00000008390	-	62	44.901	ENSCSEG00000016514	rbm26	53	45.704	Cynoglossus_semilaevis
ENSCPBG00000008390	-	77	53.374	ENSCSEG00000014910	rbm27	55	56.055	Cynoglossus_semilaevis
ENSCPBG00000008390	-	76	81.053	ENSCVAG00000014585	rbm27	63	68.148	Cyprinodon_variegatus
ENSCPBG00000008390	-	56	58.621	ENSDARG00000060521	rbm27	53	57.766	Danio_rerio
ENSCPBG00000008390	-	66	68.392	ENSDNOG00000019753	-	100	73.559	Dasypus_novemcinctus
ENSCPBG00000008390	-	66	66.712	ENSDORG00000013392	Rbm27	100	74.862	Dipodomys_ordii
ENSCPBG00000008390	-	59	57.692	FBgn0002044	swm	55	57.692	Drosophila_melanogaster
ENSCPBG00000008390	-	58	45.170	ENSEBUG00000003376	rbm26	77	55.051	Eptatretus_burgeri
ENSCPBG00000008390	-	66	69.346	ENSEASG00005020588	-	100	71.963	Equus_asinus_asinus
ENSCPBG00000008390	-	100	70.273	ENSECAG00000000883	-	100	87.692	Equus_caballus
ENSCPBG00000008390	-	66	66.349	ENSEEUG00000010335	-	100	72.004	Erinaceus_europaeus
ENSCPBG00000008390	-	87	50.909	ENSEEUG00000012342	RBM26	93	42.771	Erinaceus_europaeus
ENSCPBG00000008390	-	60	55.799	ENSELUG00000023148	rbm27	96	52.312	Esox_lucius
ENSCPBG00000008390	-	91	63.717	ENSELUG00000003110	rbm26	86	46.512	Esox_lucius
ENSCPBG00000008390	-	100	76.834	ENSFCAG00000005792	-	100	77.220	Felis_catus
ENSCPBG00000008390	-	93	80.602	ENSFALG00000003228	-	98	69.878	Ficedula_albicollis
ENSCPBG00000008390	-	66	72.263	ENSFDAG00000017029	-	100	75.553	Fukomys_damarensis
ENSCPBG00000008390	-	67	79.208	ENSFHEG00000010494	rbm27	56	51.871	Fundulus_heteroclitus
ENSCPBG00000008390	-	57	48.548	ENSFHEG00000005102	rbm26	93	50.163	Fundulus_heteroclitus
ENSCPBG00000008390	-	86	71.698	ENSGMOG00000013610	rbm27	87	62.069	Gadus_morhua
ENSCPBG00000008390	-	100	86.444	ENSGALG00000007516	-	100	84.774	Gallus_gallus
ENSCPBG00000008390	-	94	47.321	ENSGACG00000015254	rbm26	95	45.055	Gasterosteus_aculeatus
ENSCPBG00000008390	-	99	92.000	ENSGAGG00000002126	-	99	92.000	Gopherus_agassizii
ENSCPBG00000008390	-	100	71.665	ENSGGOG00000013312	-	100	72.827	Gorilla_gorilla
ENSCPBG00000008390	-	69	79.208	ENSHBUG00000003077	rbm27	57	56.186	Haplochromis_burtoni
ENSCPBG00000008390	-	66	73.139	ENSHGLG00000004076	RBM27	100	76.278	Heterocephalus_glaber_female
ENSCPBG00000008390	-	66	73.139	ENSHGLG00100003022	-	100	76.106	Heterocephalus_glaber_male
ENSCPBG00000008390	-	67	92.208	ENSHCOG00000003684	rbm27	56	52.993	Hippocampus_comes
ENSCPBG00000008390	-	62	43.032	ENSHCOG00000000066	rbm26	95	45.045	Hippocampus_comes
ENSCPBG00000008390	-	60	57.512	ENSIPUG00000012280	rbm27	96	51.456	Ictalurus_punctatus
ENSCPBG00000008390	-	55	46.967	ENSIPUG00000004579	rbm26	53	46.403	Ictalurus_punctatus
ENSCPBG00000008390	-	66	74.374	ENSSTOG00000002378	-	100	77.071	Ictidomys_tridecemlineatus
ENSCPBG00000008390	-	100	67.916	ENSJJAG00000010911	Rbm27	100	68.871	Jaculus_jaculus
ENSCPBG00000008390	-	82	81.818	ENSKMAG00000009801	rbm27	87	52.891	Kryptolebias_marmoratus
ENSCPBG00000008390	-	80	49.660	ENSLBEG00000025151	rbm27	95	51.058	Labrus_bergylta
ENSCPBG00000008390	-	100	59.199	ENSLACG00000008729	rbm27	100	58.621	Latimeria_chalumnae
ENSCPBG00000008390	-	100	58.113	ENSLOCG00000010426	rbm27	99	58.398	Lepisosteus_oculatus
ENSCPBG00000008390	-	58	48.148	ENSLOCG00000004557	rbm26	95	46.533	Lepisosteus_oculatus
ENSCPBG00000008390	-	100	73.191	ENSLAFG00000022447	-	100	74.212	Loxodonta_africana
ENSCPBG00000008390	-	100	77.886	ENSMFAG00000042337	-	100	77.984	Macaca_fascicularis
ENSCPBG00000008390	-	100	72.493	ENSMMUG00000004476	RBM27	100	73.045	Macaca_mulatta
ENSCPBG00000008390	-	100	63.636	ENSMNEG00000037798	-	99	72.304	Macaca_nemestrina
ENSCPBG00000008390	-	99	70.112	ENSMLEG00000032857	-	100	72.736	Mandrillus_leucophaeus
ENSCPBG00000008390	-	80	49.548	ENSMAMG00000021382	rbm27	96	49.477	Mastacembelus_armatus
ENSCPBG00000008390	-	73	63.551	ENSMAMG00000004375	rbm26	96	45.842	Mastacembelus_armatus
ENSCPBG00000008390	-	69	79.208	ENSMZEG00005002635	rbm27	95	51.165	Maylandia_zebra
ENSCPBG00000008390	-	68	77.049	ENSMGAG00000014927	RBM26	88	72.222	Meleagris_gallopavo
ENSCPBG00000008390	-	99	66.982	ENSMGAG00000009467	-	96	82.867	Meleagris_gallopavo
ENSCPBG00000008390	-	66	72.515	ENSMAUG00000007657	Rbm27	100	75.530	Mesocricetus_auratus
ENSCPBG00000008390	-	66	67.984	ENSMICG00000003262	-	100	73.419	Microcebus_murinus
ENSCPBG00000008390	-	100	74.544	ENSMOCG00000019479	Rbm27	100	75.193	Microtus_ochrogaster
ENSCPBG00000008390	-	94	48.338	ENSMMOG00000018170	rbm26	92	50.974	Mola_mola
ENSCPBG00000008390	-	71	71.304	ENSMMOG00000013809	rbm27	59	57.196	Mola_mola
ENSCPBG00000008390	-	66	71.930	ENSMODG00000010182	-	56	78.768	Monodelphis_domestica
ENSCPBG00000008390	-	87	73.636	ENSMALG00000018514	rbm27	86	53.547	Monopterus_albus
ENSCPBG00000008390	-	100	71.696	MGP_CAROLIEiJ_G0022226	Rbm27	100	74.687	Mus_caroli
ENSCPBG00000008390	-	100	71.696	ENSMUSG00000024491	Rbm27	100	74.687	Mus_musculus
ENSCPBG00000008390	-	100	71.978	MGP_PahariEiJ_G0018959	Rbm27	100	74.976	Mus_pahari
ENSCPBG00000008390	-	100	71.429	MGP_SPRETEiJ_G0023136	Rbm27	100	74.783	Mus_spretus
ENSCPBG00000008390	-	66	67.847	ENSMPUG00000007832	-	100	73.193	Mustela_putorius_furo
ENSCPBG00000008390	-	66	68.269	ENSMLUG00000000643	-	100	72.635	Myotis_lucifugus
ENSCPBG00000008390	-	66	72.409	ENSNGAG00000016316	Rbm27	100	75.265	Nannospalax_galili
ENSCPBG00000008390	-	77	52.232	ENSNBRG00000005739	rbm27	55	56.197	Neolamprologus_brichardi
ENSCPBG00000008390	-	99	72.212	ENSNLEG00000009886	-	100	73.102	Nomascus_leucogenys
ENSCPBG00000008390	-	76	88.636	ENSMEUG00000004031	-	73	88.095	Notamacropus_eugenii
ENSCPBG00000008390	-	75	73.262	ENSOPRG00000005424	-	81	73.158	Ochotona_princeps
ENSCPBG00000008390	-	100	71.665	ENSODEG00000005515	-	100	74.033	Octodon_degus
ENSCPBG00000008390	-	80	50.523	ENSONIG00000008506	rbm27	54	57.216	Oreochromis_niloticus
ENSCPBG00000008390	-	98	76.331	ENSOANG00000012563	-	100	77.219	Ornithorhynchus_anatinus
ENSCPBG00000008390	-	66	67.116	ENSOCUG00000000186	-	100	73.052	Oryctolagus_cuniculus
ENSCPBG00000008390	-	58	45.729	ENSORLG00000004434	rbm26	95	45.337	Oryzias_latipes
ENSCPBG00000008390	-	88	87.952	ENSORLG00000001645	rbm27	85	50.872	Oryzias_latipes
ENSCPBG00000008390	-	73	61.261	ENSORLG00020017599	rbm26	95	45.573	Oryzias_latipes_hni
ENSCPBG00000008390	-	88	87.952	ENSORLG00015003753	rbm27	85	50.581	Oryzias_latipes_hsok
ENSCPBG00000008390	-	74	62.281	ENSORLG00015015643	rbm26	95	45.436	Oryzias_latipes_hsok
ENSCPBG00000008390	-	77	50.000	ENSOMEG00000005785	rbm27	90	47.311	Oryzias_melastigma
ENSCPBG00000008390	-	74	58.065	ENSOMEG00000015536	rbm26	95	45.527	Oryzias_melastigma
ENSCPBG00000008390	-	66	67.711	ENSOGAG00000008758	-	100	72.827	Otolemur_garnettii
ENSCPBG00000008390	-	100	73.606	ENSOARG00000002840	-	100	74.814	Ovis_aries
ENSCPBG00000008390	-	100	71.665	ENSPPAG00000039646	-	100	76.686	Pan_paniscus
ENSCPBG00000008390	-	100	72.319	ENSPPRG00000021227	-	100	73.419	Panthera_pardus
ENSCPBG00000008390	-	100	72.319	ENSPTIG00000013051	-	100	73.419	Panthera_tigris_altaica
ENSCPBG00000008390	-	100	71.665	ENSPTRG00000017373	-	100	76.686	Pan_troglodytes
ENSCPBG00000008390	-	98	72.071	ENSPANG00000015776	-	99	72.727	Papio_anubis
ENSCPBG00000008390	-	62	59.468	ENSPKIG00000006776	-	96	54.930	Paramormyrops_kingsleyae
ENSCPBG00000008390	-	100	45.222	ENSPKIG00000019670	rbm26	95	46.547	Paramormyrops_kingsleyae
ENSCPBG00000008390	-	100	96.640	ENSPSIG00000016084	-	100	96.640	Pelodiscus_sinensis
ENSCPBG00000008390	-	54	52.414	ENSPMGG00000019541	rbm27	56	52.705	Periophthalmus_magnuspinnatus
ENSCPBG00000008390	-	66	70.906	ENSPEMG00000014312	Rbm27	100	74.855	Peromyscus_maniculatus_bairdii
ENSCPBG00000008390	-	86	84.848	ENSPCIG00000025797	-	99	78.204	Phascolarctos_cinereus
ENSCPBG00000008390	-	58	45.543	ENSPCIG00000014681	RBM26	99	46.774	Phascolarctos_cinereus
ENSCPBG00000008390	-	80	43.546	ENSPFOG00000015527	rbm26	95	44.900	Poecilia_formosa
ENSCPBG00000008390	-	67	76.238	ENSPLAG00000000373	rbm27	57	53.436	Poecilia_latipinna
ENSCPBG00000008390	-	74	63.025	ENSPLAG00000022377	rbm26	95	44.553	Poecilia_latipinna
ENSCPBG00000008390	-	67	76.238	ENSPMEG00000018569	rbm27	57	53.952	Poecilia_mexicana
ENSCPBG00000008390	-	92	63.025	ENSPREG00000021003	rbm26	91	50.554	Poecilia_reticulata
ENSCPBG00000008390	-	77	49.234	ENSPREG00000005827	rbm27	91	48.135	Poecilia_reticulata
ENSCPBG00000008390	-	66	68.256	ENSPPYG00000015909	-	100	73.010	Pongo_abelii
ENSCPBG00000008390	-	78	76.557	ENSPCAG00000014786	-	73	78.022	Procavia_capensis
ENSCPBG00000008390	-	55	72.821	ENSPCOG00000022256	-	100	74.872	Propithecus_coquereli
ENSCPBG00000008390	-	66	67.170	ENSPVAG00000005218	-	100	72.401	Pteropus_vampyrus
ENSCPBG00000008390	-	61	47.493	ENSPVAG00000011666	RBM26	87	46.780	Pteropus_vampyrus
ENSCPBG00000008390	-	77	51.874	ENSPNYG00000015348	rbm27	95	51.167	Pundamilia_nyererei
ENSCPBG00000008390	-	94	48.673	ENSPNAG00000003024	rbm26	91	53.597	Pygocentrus_nattereri
ENSCPBG00000008390	-	56	56.491	ENSPNAG00000027218	rbm27	95	53.227	Pygocentrus_nattereri
ENSCPBG00000008390	-	66	65.223	ENSRNOG00000027250	Rbm27	100	71.089	Rattus_norvegicus
ENSCPBG00000008390	-	51	72.436	ENSRBIG00000036925	-	98	72.258	Rhinopithecus_bieti
ENSCPBG00000008390	-	99	71.244	ENSRROG00000043836	-	100	74.586	Rhinopithecus_roxellana
ENSCPBG00000008390	-	98	72.352	ENSSBOG00000034172	-	100	76.296	Saimiri_boliviensis_boliviensis
ENSCPBG00000008390	-	58	43.002	ENSSBOG00000031813	RBM26	98	44.400	Saimiri_boliviensis_boliviensis
ENSCPBG00000008390	-	66	67.388	ENSSHAG00000006988	-	60	73.333	Sarcophilus_harrisii
ENSCPBG00000008390	-	96	40.368	ENSSFOG00015005311	rbm26	95	44.013	Scleropages_formosus
ENSCPBG00000008390	-	96	44.626	ENSSFOG00015003102	RBM26	96	46.246	Scleropages_formosus
ENSCPBG00000008390	-	96	54.328	ENSSFOG00015018009	rbm27	96	53.156	Scleropages_formosus
ENSCPBG00000008390	-	67	48.974	ENSSMAG00000011760	rbm26	96	45.659	Scophthalmus_maximus
ENSCPBG00000008390	-	83	78.218	ENSSMAG00000004138	rbm27	56	54.561	Scophthalmus_maximus
ENSCPBG00000008390	-	68	64.706	ENSSDUG00000021085	rbm27	57	54.622	Seriola_dumerili
ENSCPBG00000008390	-	65	78.218	ENSSLDG00000006922	rbm27	85	55.008	Seriola_lalandi_dorsalis
ENSCPBG00000008390	-	66	68.529	ENSSARG00000000313	-	100	70.698	Sorex_araneus
ENSCPBG00000008390	-	99	78.736	ENSSPUG00000013753	-	99	77.969	Sphenodon_punctatus
ENSCPBG00000008390	-	87	48.949	ENSSPAG00000004632	rbm26	96	45.501	Stegastes_partitus
ENSCPBG00000008390	-	88	80.233	ENSSPAG00000012000	rbm27	96	51.397	Stegastes_partitus
ENSCPBG00000008390	-	98	80.161	ENSTGUG00000000085	-	100	80.161	Taeniopygia_guttata
ENSCPBG00000008390	-	76	52.121	ENSTRUG00000004518	rbm27	96	50.486	Takifugu_rubripes
ENSCPBG00000008390	-	88	45.798	ENSTRUG00000017189	rbm26	96	45.382	Takifugu_rubripes
ENSCPBG00000008390	-	77	47.894	ENSTNIG00000018215	rbm27	96	45.455	Tetraodon_nigroviridis
ENSCPBG00000008390	-	64	54.902	ENSTBEG00000003854	RBM26	56	53.586	Tupaia_belangeri
ENSCPBG00000008390	-	66	67.847	ENSTTRG00000016713	-	100	73.052	Tursiops_truncatus
ENSCPBG00000008390	-	88	71.267	ENSUAMG00000019864	-	93	71.764	Ursus_americanus
ENSCPBG00000008390	-	95	75.405	ENSUMAG00000010569	-	98	75.733	Ursus_maritimus
ENSCPBG00000008390	-	86	87.023	ENSVPAG00000000558	-	85	87.023	Vicugna_pacos
ENSCPBG00000008390	-	66	48.311	ENSVPAG00000009821	RBM26	66	48.705	Vicugna_pacos
ENSCPBG00000008390	-	100	76.590	ENSVVUG00000021131	-	100	76.975	Vulpes_vulpes
ENSCPBG00000008390	-	61	47.731	ENSXETG00000017810	rbm26	96	47.805	Xenopus_tropicalis
ENSCPBG00000008390	-	100	64.990	ENSXETG00000002322	rbm27	99	64.888	Xenopus_tropicalis
ENSCPBG00000008390	-	72	67.347	ENSXCOG00000001827	rbm26	88	78.481	Xiphophorus_couchianus
ENSCPBG00000008390	-	66	53.626	ENSXCOG00000005859	rbm27	55	78.788	Xiphophorus_couchianus