EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000008580 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Minus strand
Length: 4765 bases
Position: chrKK083685.1:62953-67717
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000011248	zf-C2H2	PF00096.26	9.6e-48	1	8
ENSCPBP00000011248	zf-C2H2	PF00096.26	9.6e-48	2	8
ENSCPBP00000011248	zf-C2H2	PF00096.26	9.6e-48	3	8
ENSCPBP00000011248	zf-C2H2	PF00096.26	9.6e-48	4	8
ENSCPBP00000011248	zf-C2H2	PF00096.26	9.6e-48	5	8
ENSCPBP00000011248	zf-C2H2	PF00096.26	9.6e-48	6	8
ENSCPBP00000011248	zf-C2H2	PF00096.26	9.6e-48	7	8
ENSCPBP00000011248	zf-C2H2	PF00096.26	9.6e-48	8	8
ENSCPBP00000011244	zf-C2H2	PF00096.26	1.2e-47	1	8
ENSCPBP00000011244	zf-C2H2	PF00096.26	1.2e-47	2	8
ENSCPBP00000011244	zf-C2H2	PF00096.26	1.2e-47	3	8
ENSCPBP00000011244	zf-C2H2	PF00096.26	1.2e-47	4	8
ENSCPBP00000011244	zf-C2H2	PF00096.26	1.2e-47	5	8
ENSCPBP00000011244	zf-C2H2	PF00096.26	1.2e-47	6	8
ENSCPBP00000011244	zf-C2H2	PF00096.26	1.2e-47	7	8
ENSCPBP00000011244	zf-C2H2	PF00096.26	1.2e-47	8	8
ENSCPBP00000011248	zf-met	PF12874.7	6.7e-06	1	1
ENSCPBP00000011244	zf-met	PF12874.7	8e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000013481	-	2837	-	ENSCPBP00000011244	511 (aa)	-	-
ENSCPBT00000013486	-	2807	-	ENSCPBP00000011248	501 (aa)	-	UPI000388B176

Gene Model

Click here to download ENSCPBG00000008580's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000008580's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000008580	-	75	61.702	ENSCPBG00000002014	-	69	39.015
ENSCPBG00000008580	-	78	34.361	ENSCPBG00000004542	ZNF865	89	30.913
ENSCPBG00000008580	-	91	50.000	ENSCPBG00000001421	-	99	45.385
ENSCPBG00000008580	-	90	38.800	ENSCPBG00000001526	-	93	39.919
ENSCPBG00000008580	-	75	46.305	ENSCPBG00000009849	-	93	46.305
ENSCPBG00000008580	-	100	48.810	ENSCPBG00000015500	-	92	48.810
ENSCPBG00000008580	-	82	37.542	ENSCPBG00000009609	-	86	35.452
ENSCPBG00000008580	-	100	44.690	ENSCPBG00000003774	-	94	40.850
ENSCPBG00000008580	-	100	45.798	ENSCPBG00000017494	-	94	45.022
ENSCPBG00000008580	-	75	34.591	ENSCPBG00000005715	ZBTB49	66	36.898
ENSCPBG00000008580	-	75	35.179	ENSCPBG00000023415	GZF1	56	35.179
ENSCPBG00000008580	-	96	41.485	ENSCPBG00000023418	-	58	38.318
ENSCPBG00000008580	-	80	37.931	ENSCPBG00000026947	ZNF319	93	37.931
ENSCPBG00000008580	-	100	48.039	ENSCPBG00000016841	-	96	50.833
ENSCPBG00000008580	-	100	41.776	ENSCPBG00000001272	-	92	44.589
ENSCPBG00000008580	-	85	47.345	ENSCPBG00000017489	-	99	47.345
ENSCPBG00000008580	-	75	40.367	ENSCPBG00000016039	MYNN	68	40.367
ENSCPBG00000008580	-	100	49.180	ENSCPBG00000004030	-	92	45.522
ENSCPBG00000008580	-	100	42.347	ENSCPBG00000004990	-	100	45.817
ENSCPBG00000008580	-	91	50.360	ENSCPBG00000026433	-	80	50.360
ENSCPBG00000008580	-	82	37.445	ENSCPBG00000024735	PRDM5	84	37.267
ENSCPBG00000008580	-	100	46.000	ENSCPBG00000001181	-	98	47.325
ENSCPBG00000008580	-	78	46.734	ENSCPBG00000002063	-	57	46.734
ENSCPBG00000008580	-	78	42.517	ENSCPBG00000005703	-	55	42.517
ENSCPBG00000008580	-	89	39.456	ENSCPBG00000021487	-	85	41.296
ENSCPBG00000008580	-	76	47.036	ENSCPBG00000021479	-	82	44.048
ENSCPBG00000008580	-	74	46.784	ENSCPBG00000001258	-	93	46.784
ENSCPBG00000008580	-	100	44.400	ENSCPBG00000002430	-	92	44.898
ENSCPBG00000008580	-	83	41.608	ENSCPBG00000003130	-	99	46.091
ENSCPBG00000008580	-	75	45.902	ENSCPBG00000013652	-	68	45.902
ENSCPBG00000008580	-	100	49.789	ENSCPBG00000012976	-	97	46.305
ENSCPBG00000008580	-	78	49.606	ENSCPBG00000005586	-	65	46.774

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000008580	-	100	48.879	ENSACAG00000024956	-	93	46.460	Anolis_carolinensis
ENSCPBG00000008580	-	77	45.000	ENSACAG00000008664	-	68	45.000	Anolis_carolinensis
ENSCPBG00000008580	-	76	41.883	ENSACAG00000024898	-	98	41.883	Anolis_carolinensis
ENSCPBG00000008580	-	81	45.749	ENSAMXG00000038325	-	97	43.200	Astyanax_mexicanus
ENSCPBG00000008580	-	75	40.604	ENSAMXG00000034344	-	74	40.604	Astyanax_mexicanus
ENSCPBG00000008580	-	78	44.061	ENSAMXG00000042746	-	93	45.161	Astyanax_mexicanus
ENSCPBG00000008580	-	80	43.182	ENSAMXG00000036233	-	86	43.182	Astyanax_mexicanus
ENSCPBG00000008580	-	75	52.212	ENSAMXG00000042784	-	94	52.212	Astyanax_mexicanus
ENSCPBG00000008580	-	76	44.984	ENSAMXG00000010805	-	97	44.984	Astyanax_mexicanus
ENSCPBG00000008580	-	77	43.779	ENSAMXG00000032841	-	78	43.779	Astyanax_mexicanus
ENSCPBG00000008580	-	79	47.059	ENSAMXG00000034847	-	91	43.478	Astyanax_mexicanus
ENSCPBG00000008580	-	87	36.797	ENSAMXG00000035246	-	73	36.797	Astyanax_mexicanus
ENSCPBG00000008580	-	78	44.061	ENSAMXG00000038536	-	93	42.742	Astyanax_mexicanus
ENSCPBG00000008580	-	78	41.830	ENSAMXG00000025452	-	99	41.611	Astyanax_mexicanus
ENSCPBG00000008580	-	75	43.726	ENSAMXG00000038636	-	98	43.726	Astyanax_mexicanus
ENSCPBG00000008580	-	75	41.532	ENSBTAG00000038322	-	76	41.532	Bos_taurus
ENSCPBG00000008580	-	84	37.838	ENSCSAVG00000010960	-	100	37.417	Ciona_savignyi
ENSCPBG00000008580	-	81	41.767	ENSDNOG00000047495	-	85	41.767	Dasypus_novemcinctus
ENSCPBG00000008580	-	99	37.217	ENSEBUG00000012919	-	97	42.063	Eptatretus_burgeri
ENSCPBG00000008580	-	75	35.000	ENSEBUG00000002075	-	76	35.016	Eptatretus_burgeri
ENSCPBG00000008580	-	74	42.910	ENSEBUG00000011694	-	95	42.537	Eptatretus_burgeri
ENSCPBG00000008580	-	75	41.107	ENSEBUG00000008306	-	79	41.107	Eptatretus_burgeri
ENSCPBG00000008580	-	80	34.661	ENSEBUG00000013875	-	87	34.661	Eptatretus_burgeri
ENSCPBG00000008580	-	85	41.121	ENSEBUG00000011435	-	84	36.393	Eptatretus_burgeri
ENSCPBG00000008580	-	85	33.069	ENSEBUG00000005264	-	79	33.069	Eptatretus_burgeri
ENSCPBG00000008580	-	76	33.654	ENSEBUG00000014717	-	84	36.626	Eptatretus_burgeri
ENSCPBG00000008580	-	75	38.596	ENSEBUG00000015837	-	96	38.596	Eptatretus_burgeri
ENSCPBG00000008580	-	75	41.365	ENSEASG00005004469	-	74	41.365	Equus_asinus_asinus
ENSCPBG00000008580	-	81	36.131	ENSGMOG00000018506	-	100	36.131	Gadus_morhua
ENSCPBG00000008580	-	75	40.532	ENSGALG00000049609	-	58	42.213	Gallus_gallus
ENSCPBG00000008580	-	75	41.916	ENSGALG00000055127	-	69	41.916	Gallus_gallus
ENSCPBG00000008580	-	76	40.408	ENSGALG00000053507	-	78	39.487	Gallus_gallus
ENSCPBG00000008580	-	76	48.879	ENSGALG00000054325	-	99	48.879	Gallus_gallus
ENSCPBG00000008580	-	100	45.847	ENSGALG00000044069	-	88	39.314	Gallus_gallus
ENSCPBG00000008580	-	85	49.200	ENSGALG00000046336	-	100	47.036	Gallus_gallus
ENSCPBG00000008580	-	74	45.113	ENSGACG00000006283	-	70	45.113	Gasterosteus_aculeatus
ENSCPBG00000008580	-	77	39.500	ENSGAGG00000011366	-	92	44.490	Gopherus_agassizii
ENSCPBG00000008580	-	77	45.872	ENSGAGG00000018885	-	77	48.178	Gopherus_agassizii
ENSCPBG00000008580	-	77	44.928	ENSGAGG00000011399	-	91	44.928	Gopherus_agassizii
ENSCPBG00000008580	-	74	36.202	ENSHCOG00000018201	-	91	38.697	Hippocampus_comes
ENSCPBG00000008580	-	83	35.179	ENSIPUG00000012109	ZN12	51	35.179	Ictalurus_punctatus
ENSCPBG00000008580	-	91	41.914	ENSIPUG00000015468	-	98	39.164	Ictalurus_punctatus
ENSCPBG00000008580	-	78	45.133	ENSIPUG00000021515	-	85	44.534	Ictalurus_punctatus
ENSCPBG00000008580	-	75	43.750	ENSJJAG00000023633	Zfp672	90	43.852	Jaculus_jaculus
ENSCPBG00000008580	-	100	42.570	ENSLACG00000022211	-	93	41.700	Latimeria_chalumnae
ENSCPBG00000008580	-	76	33.681	ENSLACG00000005264	-	97	33.681	Latimeria_chalumnae
ENSCPBG00000008580	-	75	36.596	ENSLACG00000009005	-	99	36.596	Latimeria_chalumnae
ENSCPBG00000008580	-	75	41.732	ENSLOCG00000017864	-	100	41.732	Lepisosteus_oculatus
ENSCPBG00000008580	-	78	41.830	ENSMGAG00000013362	-	99	40.574	Meleagris_gallopavo
ENSCPBG00000008580	-	77	44.167	ENSMAUG00000009945	Zfp672	92	39.228	Mesocricetus_auratus
ENSCPBG00000008580	-	74	44.361	ENSMMOG00000003923	-	83	44.361	Mola_mola
ENSCPBG00000008580	-	100	45.455	ENSMODG00000001880	-	95	45.161	Monodelphis_domestica
ENSCPBG00000008580	-	78	40.214	ENSMODG00000010532	-	95	40.323	Monodelphis_domestica
ENSCPBG00000008580	-	78	44.167	MGP_CAROLIEiJ_G0016391	Zfp672	93	52.632	Mus_caroli
ENSCPBG00000008580	-	100	35.606	MGP_CAROLIEiJ_G0030502	-	86	36.082	Mus_caroli
ENSCPBG00000008580	-	100	40.784	ENSMUSG00000030823	9130019O22Rik	86	40.316	Mus_musculus
ENSCPBG00000008580	-	75	38.824	MGP_SPRETEiJ_G0031613	-	77	38.824	Mus_spretus
ENSCPBG00000008580	-	79	44.167	MGP_SPRETEiJ_G0017233	Zfp672	93	50.000	Mus_spretus
ENSCPBG00000008580	-	100	39.683	ENSNGAG00000015777	Zim1	89	38.057	Nannospalax_galili
ENSCPBG00000008580	-	79	39.600	ENSNBRG00000000708	-	91	39.912	Neolamprologus_brichardi
ENSCPBG00000008580	-	55	45.833	ENSORLG00020001922	-	90	43.609	Oryzias_latipes_hni
ENSCPBG00000008580	-	61	47.107	ENSOMEG00000001598	-	65	47.107	Oryzias_melastigma
ENSCPBG00000008580	-	82	34.897	ENSPSIG00000006586	-	99	34.589	Pelodiscus_sinensis
ENSCPBG00000008580	-	76	45.333	ENSPSIG00000010248	-	63	45.333	Pelodiscus_sinensis
ENSCPBG00000008580	-	75	54.667	ENSPSIG00000006790	-	89	54.667	Pelodiscus_sinensis
ENSCPBG00000008580	-	100	43.902	ENSPSIG00000016380	-	91	41.528	Pelodiscus_sinensis
ENSCPBG00000008580	-	81	42.775	ENSPSIG00000005672	-	78	42.231	Pelodiscus_sinensis
ENSCPBG00000008580	-	99	37.701	ENSPSIG00000003152	-	98	38.290	Pelodiscus_sinensis
ENSCPBG00000008580	-	78	38.360	ENSPSIG00000012650	-	75	39.088	Pelodiscus_sinensis
ENSCPBG00000008580	-	90	39.256	ENSPSIG00000000672	-	92	39.256	Pelodiscus_sinensis
ENSCPBG00000008580	-	100	37.500	ENSPSIG00000004502	-	85	37.500	Pelodiscus_sinensis
ENSCPBG00000008580	-	100	38.710	ENSPSIG00000010328	-	90	37.826	Pelodiscus_sinensis
ENSCPBG00000008580	-	100	47.826	ENSPSIG00000013021	-	93	47.177	Pelodiscus_sinensis
ENSCPBG00000008580	-	98	31.907	ENSPSIG00000005603	-	90	31.907	Pelodiscus_sinensis
ENSCPBG00000008580	-	100	46.701	ENSPSIG00000015459	-	92	44.215	Pelodiscus_sinensis
ENSCPBG00000008580	-	80	32.391	ENSPREG00000002642	-	97	32.391	Poecilia_reticulata
ENSCPBG00000008580	-	75	44.000	ENSPNYG00000015486	-	52	44.000	Pundamilia_nyererei
ENSCPBG00000008580	-	78	44.215	ENSPNAG00000000088	-	94	43.498	Pygocentrus_nattereri
ENSCPBG00000008580	-	79	45.614	ENSPNAG00000018395	-	66	45.614	Pygocentrus_nattereri
ENSCPBG00000008580	-	77	44.167	ENSRNOG00000002713	Zfp672	90	44.262	Rattus_norvegicus
ENSCPBG00000008580	-	100	42.795	ENSSHAG00000018106	-	95	43.750	Sarcophilus_harrisii
ENSCPBG00000008580	-	81	36.923	ENSSFOG00015019818	-	90	36.923	Scleropages_formosus
ENSCPBG00000008580	-	75	32.153	ENSSMAG00000004252	-	87	32.174	Scophthalmus_maximus
ENSCPBG00000008580	-	81	45.324	ENSSPUG00000010016	-	98	42.284	Sphenodon_punctatus
ENSCPBG00000008580	-	94	40.484	ENSSPUG00000004366	-	72	48.148	Sphenodon_punctatus
ENSCPBG00000008580	-	63	46.789	ENSSPAG00000021653	-	94	46.789	Stegastes_partitus
ENSCPBG00000008580	-	74	53.211	ENSTGUG00000018351	-	100	53.211	Taeniopygia_guttata
ENSCPBG00000008580	-	76	40.860	ENSTGUG00000015210	-	100	40.860	Taeniopygia_guttata
ENSCPBG00000008580	-	96	40.984	ENSTRUG00000022066	-	97	37.719	Takifugu_rubripes
ENSCPBG00000008580	-	75	42.453	ENSXETG00000031192	-	100	42.453	Xenopus_tropicalis
ENSCPBG00000008580	-	75	42.915	ENSXCOG00000006553	-	84	42.915	Xiphophorus_couchianus
ENSCPBG00000008580	-	80	32.524	ENSXMAG00000026680	-	85	32.524	Xiphophorus_maculatus