EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCPBG00000008684 (Gene tree)
Gene ID: 101943722
Gene Symbol: RNASEH2B
Alias: AGS2|DLEU8|FLJ11712
Full Name: ribonuclease H2 subunit B
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Plus strand
Length: 118963 bases
Position: chr1:56885995-57004957
Accession: 25671
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000011391	RNase_H2-Ydr279	PF09468.10	3.5e-16	1	1
ENSCPBP00000011372	RNase_H2-Ydr279	PF09468.10	4.4e-16	1	1
ENSCPBP00000011378	RNase_H2-Ydr279	PF09468.10	4.4e-16	1	1
ENSCPBP00000011386	RNase_H2-Ydr279	PF09468.10	4.5e-16	1	1
ENSCPBP00000011399	RNase_H2-Ydr279	PF09468.10	5.4e-16	1	1
ENSCPBP00000011402	RNase_H2-Ydr279	PF09468.10	6.3e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000013661	RNASEH2B-206	1131	-	ENSCPBP00000011402	323 (aa)	-	-
ENSCPBT00000013637	RNASEH2B-202	1881	-	ENSCPBP00000011378	270 (aa)	-	-
ENSCPBT00000013631	RNASEH2B-201	1048	-	ENSCPBP00000011372	278 (aa)	-	-
ENSCPBT00000013658	RNASEH2B-205	1043	-	ENSCPBP00000011399	324 (aa)	XP_008166384	UPI000CE6361C
ENSCPBT00000013645	RNASEH2B-203	1675	-	ENSCPBP00000011386	272 (aa)	XP_005287166	UPI000CE6581E
ENSCPBT00000013650	RNASEH2B-204	1603	-	ENSCPBP00000011391	248 (aa)	-	-

Gene Model

Click here to download ENSCPBG00000008684's gene model file

Pathways

Pathway ID	Pathway Name	Source
cpic03030	DNA replication	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000008684's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000008684	RNASEH2B	92	60.853	ENSG00000136104	RNASEH2B	97	68.966	Homo_sapiens
ENSCPBG00000008684	RNASEH2B	95	59.416	ENSAPOG00000010496	rnaseh2b	99	59.416	Acanthochromis_polyacanthus
ENSCPBG00000008684	RNASEH2B	87	58.042	ENSAMEG00000012040	RNASEH2B	97	58.042	Ailuropoda_melanoleuca
ENSCPBG00000008684	RNASEH2B	95	51.613	ENSACIG00000021991	rnaseh2b	97	56.931	Amphilophus_citrinellus
ENSCPBG00000008684	RNASEH2B	95	59.740	ENSAOCG00000013398	rnaseh2b	99	59.740	Amphiprion_ocellaris
ENSCPBG00000008684	RNASEH2B	95	59.740	ENSAPEG00000006033	rnaseh2b	99	59.740	Amphiprion_percula
ENSCPBG00000008684	RNASEH2B	95	59.740	ENSATEG00000008370	rnaseh2b	99	59.740	Anabas_testudineus
ENSCPBG00000008684	RNASEH2B	90	76.494	ENSAPLG00000008955	RNASEH2B	100	79.044	Anas_platyrhynchos
ENSCPBG00000008684	RNASEH2B	89	74.048	ENSACAG00000011679	RNASEH2B	97	74.048	Anolis_carolinensis
ENSCPBG00000008684	RNASEH2B	90	61.301	ENSANAG00000020662	RNASEH2B	94	61.301	Aotus_nancymaae
ENSCPBG00000008684	RNASEH2B	95	57.468	ENSACLG00000000467	rnaseh2b	99	57.468	Astatotilapia_calliptera
ENSCPBG00000008684	RNASEH2B	95	56.678	ENSAMXG00000014351	rnaseh2b	99	56.678	Astyanax_mexicanus
ENSCPBG00000008684	RNASEH2B	89	57.931	ENSBTAG00000020149	RNASEH2B	94	57.931	Bos_taurus
ENSCPBG00000008684	RNASEH2B	90	60.345	ENSCJAG00000008585	-	96	60.345	Callithrix_jacchus
ENSCPBG00000008684	RNASEH2B	86	58.986	ENSCJAG00000003822	-	90	55.738	Callithrix_jacchus
ENSCPBG00000008684	RNASEH2B	87	57.613	ENSCAFG00000004295	RNASEH2B	92	56.890	Canis_familiaris
ENSCPBG00000008684	RNASEH2B	92	56.376	ENSCAFG00020000250	RNASEH2B	97	56.376	Canis_lupus_dingo
ENSCPBG00000008684	RNASEH2B	93	56.811	ENSCHIG00000018220	RNASEH2B	98	56.811	Capra_hircus
ENSCPBG00000008684	RNASEH2B	72	53.879	ENSCHIG00000012982	-	82	53.879	Capra_hircus
ENSCPBG00000008684	RNASEH2B	89	52.249	ENSTSYG00000031177	-	95	52.249	Carlito_syrichta
ENSCPBG00000008684	RNASEH2B	87	60.905	ENSTSYG00000009176	-	92	60.071	Carlito_syrichta
ENSCPBG00000008684	RNASEH2B	90	50.996	ENSCAPG00000009978	RNASEH2B	95	53.873	Cavia_aperea
ENSCPBG00000008684	RNASEH2B	90	58.020	ENSCPOG00000032527	RNASEH2B	94	58.020	Cavia_porcellus
ENSCPBG00000008684	RNASEH2B	90	60.690	ENSCCAG00000026979	RNASEH2B	95	60.764	Cebus_capucinus
ENSCPBG00000008684	RNASEH2B	88	62.324	ENSCATG00000031336	RNASEH2B	80	62.324	Cercocebus_atys
ENSCPBG00000008684	RNASEH2B	92	59.144	ENSCLAG00000003517	RNASEH2B	78	61.484	Chinchilla_lanigera
ENSCPBG00000008684	RNASEH2B	89	61.034	ENSCSAG00000017701	RNASEH2B	88	61.034	Chlorocebus_sabaeus
ENSCPBG00000008684	RNASEH2B	95	51.290	ENSCHOG00000013688	RNASEH2B	100	51.290	Choloepus_hoffmanni
ENSCPBG00000008684	RNASEH2B	82	36.861	ENSCING00000016454	-	88	36.861	Ciona_intestinalis
ENSCPBG00000008684	RNASEH2B	90	61.356	ENSCANG00000041511	-	94	61.356	Colobus_angolensis_palliatus
ENSCPBG00000008684	RNASEH2B	94	59.211	ENSCGRG00001000611	Rnaseh2b	98	59.211	Cricetulus_griseus_chok1gshd
ENSCPBG00000008684	RNASEH2B	94	59.211	ENSCGRG00000006077	Rnaseh2b	98	59.211	Cricetulus_griseus_crigri
ENSCPBG00000008684	RNASEH2B	94	57.329	ENSCSEG00000004910	rnaseh2b	99	57.329	Cynoglossus_semilaevis
ENSCPBG00000008684	RNASEH2B	95	56.169	ENSCVAG00000005212	rnaseh2b	99	56.169	Cyprinodon_variegatus
ENSCPBG00000008684	RNASEH2B	95	56.169	ENSDARG00000005128	rnaseh2b	99	56.169	Danio_rerio
ENSCPBG00000008684	RNASEH2B	86	59.286	ENSDNOG00000049666	-	90	58.781	Dasypus_novemcinctus
ENSCPBG00000008684	RNASEH2B	93	54.667	ENSDNOG00000034290	-	97	54.667	Dasypus_novemcinctus
ENSCPBG00000008684	RNASEH2B	94	57.895	ENSDORG00000010708	Rnaseh2b	98	57.895	Dipodomys_ordii
ENSCPBG00000008684	RNASEH2B	98	30.199	FBgn0030507	CG11164	89	31.190	Drosophila_melanogaster
ENSCPBG00000008684	RNASEH2B	79	42.085	ENSEBUG00000005965	rnaseh2b	98	42.692	Eptatretus_burgeri
ENSCPBG00000008684	RNASEH2B	93	59.406	ENSEASG00005017323	RNASEH2B	98	59.406	Equus_asinus_asinus
ENSCPBG00000008684	RNASEH2B	93	59.406	ENSECAG00000014262	RNASEH2B	98	59.406	Equus_caballus
ENSCPBG00000008684	RNASEH2B	95	56.818	ENSELUG00000019560	rnaseh2b	99	56.818	Esox_lucius
ENSCPBG00000008684	RNASEH2B	92	56.566	ENSFCAG00000014257	RNASEH2B	91	56.566	Felis_catus
ENSCPBG00000008684	RNASEH2B	92	72.266	ENSFALG00000008435	RNASEH2B	97	73.427	Ficedula_albicollis
ENSCPBG00000008684	RNASEH2B	87	59.431	ENSFDAG00000009920	RNASEH2B	98	59.431	Fukomys_damarensis
ENSCPBG00000008684	RNASEH2B	95	58.117	ENSFHEG00000012160	rnaseh2b	99	58.117	Fundulus_heteroclitus
ENSCPBG00000008684	RNASEH2B	89	54.626	ENSGMOG00000016830	rnaseh2b	92	60.526	Gadus_morhua
ENSCPBG00000008684	RNASEH2B	95	73.701	ENSGALG00000017015	RNASEH2B	100	73.701	Gallus_gallus
ENSCPBG00000008684	RNASEH2B	95	55.519	ENSGAFG00000021222	rnaseh2b	99	55.519	Gambusia_affinis
ENSCPBG00000008684	RNASEH2B	95	56.230	ENSGACG00000002821	rnaseh2b	99	56.230	Gasterosteus_aculeatus
ENSCPBG00000008684	RNASEH2B	88	97.143	ENSGAGG00000014722	RNASEH2B	100	97.491	Gopherus_agassizii
ENSCPBG00000008684	RNASEH2B	90	61.695	ENSGGOG00000001044	RNASEH2B	94	61.695	Gorilla_gorilla
ENSCPBG00000008684	RNASEH2B	95	57.792	ENSHBUG00000006049	rnaseh2b	99	57.792	Haplochromis_burtoni
ENSCPBG00000008684	RNASEH2B	87	60.082	ENSHGLG00100015953	RNASEH2B	96	60.071	Heterocephalus_glaber_male
ENSCPBG00000008684	RNASEH2B	95	53.722	ENSHCOG00000003318	rnaseh2b	99	53.722	Hippocampus_comes
ENSCPBG00000008684	RNASEH2B	94	57.705	ENSIPUG00000023815	rnaseh2b	99	57.705	Ictalurus_punctatus
ENSCPBG00000008684	RNASEH2B	87	61.728	ENSSTOG00000015126	RNASEH2B	96	62.143	Ictidomys_tridecemlineatus
ENSCPBG00000008684	RNASEH2B	88	63.158	ENSJJAG00000013335	Rnaseh2b	96	63.158	Jaculus_jaculus
ENSCPBG00000008684	RNASEH2B	95	57.143	ENSKMAG00000002198	rnaseh2b	99	57.143	Kryptolebias_marmoratus
ENSCPBG00000008684	RNASEH2B	94	59.477	ENSLBEG00000019331	rnaseh2b	99	59.477	Labrus_bergylta
ENSCPBG00000008684	RNASEH2B	68	66.667	ENSLACG00000010782	RNASEH2B	91	66.079	Latimeria_chalumnae
ENSCPBG00000008684	RNASEH2B	94	62.500	ENSLOCG00000009296	rnaseh2b	98	62.500	Lepisosteus_oculatus
ENSCPBG00000008684	RNASEH2B	87	58.607	ENSLAFG00000030158	RNASEH2B	92	58.451	Loxodonta_africana
ENSCPBG00000008684	RNASEH2B	91	61.565	ENSMFAG00000038464	-	95	61.565	Macaca_fascicularis
ENSCPBG00000008684	RNASEH2B	86	62.037	ENSMMUG00000021746	RNASEH2B	95	58.848	Macaca_mulatta
ENSCPBG00000008684	RNASEH2B	91	61.565	ENSMNEG00000030580	RNASEH2B	95	61.565	Macaca_nemestrina
ENSCPBG00000008684	RNASEH2B	91	60.943	ENSMLEG00000043911	-	95	60.943	Mandrillus_leucophaeus
ENSCPBG00000008684	RNASEH2B	95	59.740	ENSMAMG00000017109	rnaseh2b	99	59.740	Mastacembelus_armatus
ENSCPBG00000008684	RNASEH2B	95	53.651	ENSMZEG00005021926	rnaseh2b	99	53.651	Maylandia_zebra
ENSCPBG00000008684	RNASEH2B	88	75.918	ENSMGAG00000015025	RNASEH2B	100	75.610	Meleagris_gallopavo
ENSCPBG00000008684	RNASEH2B	92	59.197	ENSMAUG00000016520	Rnaseh2b	97	59.197	Mesocricetus_auratus
ENSCPBG00000008684	RNASEH2B	94	58.746	ENSMICG00000000528	RNASEH2B	96	58.746	Microcebus_murinus
ENSCPBG00000008684	RNASEH2B	95	56.818	ENSMMOG00000019799	rnaseh2b	97	63.082	Mola_mola
ENSCPBG00000008684	RNASEH2B	94	71.947	ENSMODG00000010775	RNASEH2B	99	71.947	Monodelphis_domestica
ENSCPBG00000008684	RNASEH2B	95	59.091	ENSMALG00000004463	rnaseh2b	100	59.091	Monopterus_albus
ENSCPBG00000008684	RNASEH2B	77	59.346	MGP_CAROLIEiJ_G0019389	Rnaseh2b	99	53.094	Mus_caroli
ENSCPBG00000008684	RNASEH2B	94	59.016	ENSMUSG00000021932	Rnaseh2b	99	59.016	Mus_musculus
ENSCPBG00000008684	RNASEH2B	93	48.538	MGP_PahariEiJ_G0030407	-	98	48.538	Mus_pahari
ENSCPBG00000008684	RNASEH2B	86	56.481	ENSMPUG00000018010	RNASEH2B	98	54.274	Mustela_putorius_furo
ENSCPBG00000008684	RNASEH2B	95	58.958	ENSMLUG00000004065	-	97	58.958	Myotis_lucifugus
ENSCPBG00000008684	RNASEH2B	95	57.468	ENSNBRG00000003253	rnaseh2b	99	57.468	Neolamprologus_brichardi
ENSCPBG00000008684	RNASEH2B	90	61.695	ENSNLEG00000003804	RNASEH2B	94	61.695	Nomascus_leucogenys
ENSCPBG00000008684	RNASEH2B	88	72.581	ENSMEUG00000003665	RNASEH2B	97	72.535	Notamacropus_eugenii
ENSCPBG00000008684	RNASEH2B	50	58.571	ENSOPRG00000003695	-	51	62.733	Ochotona_princeps
ENSCPBG00000008684	RNASEH2B	87	53.527	ENSODEG00000005412	-	95	53.527	Octodon_degus
ENSCPBG00000008684	RNASEH2B	90	60.959	ENSODEG00000006793	-	95	60.959	Octodon_degus
ENSCPBG00000008684	RNASEH2B	95	57.143	ENSONIG00000006657	rnaseh2b	99	57.143	Oreochromis_niloticus
ENSCPBG00000008684	RNASEH2B	92	68.702	ENSOANG00000015537	RNASEH2B	99	71.972	Ornithorhynchus_anatinus
ENSCPBG00000008684	RNASEH2B	99	55.763	ENSOCUG00000008904	RNASEH2B	92	59.044	Oryctolagus_cuniculus
ENSCPBG00000008684	RNASEH2B	93	57.807	ENSORLG00000011850	rnaseh2b	99	57.807	Oryzias_latipes
ENSCPBG00000008684	RNASEH2B	93	58.140	ENSORLG00020012081	rnaseh2b	99	58.140	Oryzias_latipes_hni
ENSCPBG00000008684	RNASEH2B	93	57.807	ENSORLG00015015468	rnaseh2b	99	57.807	Oryzias_latipes_hsok
ENSCPBG00000008684	RNASEH2B	94	57.049	ENSOMEG00000012441	rnaseh2b	100	57.049	Oryzias_melastigma
ENSCPBG00000008684	RNASEH2B	88	60.976	ENSOGAG00000016486	RNASEH2B	96	60.976	Otolemur_garnettii
ENSCPBG00000008684	RNASEH2B	87	59.574	ENSOARG00000008701	RNASEH2B	95	59.574	Ovis_aries
ENSCPBG00000008684	RNASEH2B	86	62.551	ENSPPAG00000026374	RNASEH2B	99	60.177	Pan_paniscus
ENSCPBG00000008684	RNASEH2B	94	55.663	ENSPPRG00000012450	RNASEH2B	99	55.663	Panthera_pardus
ENSCPBG00000008684	RNASEH2B	86	57.787	ENSPTIG00000013918	RNASEH2B	98	58.696	Panthera_tigris_altaica
ENSCPBG00000008684	RNASEH2B	90	61.356	ENSPTRG00000005886	RNASEH2B	95	64.800	Pan_troglodytes
ENSCPBG00000008684	RNASEH2B	91	60.943	ENSPANG00000022424	-	95	60.943	Papio_anubis
ENSCPBG00000008684	RNASEH2B	94	56.066	ENSPKIG00000013386	rnaseh2b	99	56.066	Paramormyrops_kingsleyae
ENSCPBG00000008684	RNASEH2B	70	89.362	ENSPSIG00000002224	RNASEH2B	87	89.362	Pelodiscus_sinensis
ENSCPBG00000008684	RNASEH2B	60	62.245	ENSPMGG00000010299	rnaseh2b	95	62.245	Periophthalmus_magnuspinnatus
ENSCPBG00000008684	RNASEH2B	94	60.526	ENSPEMG00000019721	Rnaseh2b	98	60.526	Peromyscus_maniculatus_bairdii
ENSCPBG00000008684	RNASEH2B	94	69.925	ENSPCIG00000014535	-	99	69.966	Phascolarctos_cinereus
ENSCPBG00000008684	RNASEH2B	95	57.419	ENSPFOG00000016722	rnaseh2b	99	57.419	Poecilia_formosa
ENSCPBG00000008684	RNASEH2B	95	57.143	ENSPLAG00000011755	rnaseh2b	99	57.143	Poecilia_latipinna
ENSCPBG00000008684	RNASEH2B	95	57.143	ENSPMEG00000002721	rnaseh2b	99	57.143	Poecilia_mexicana
ENSCPBG00000008684	RNASEH2B	95	56.494	ENSPREG00000007737	rnaseh2b	99	56.494	Poecilia_reticulata
ENSCPBG00000008684	RNASEH2B	90	61.356	ENSPPYG00000005378	RNASEH2B	94	61.356	Pongo_abelii
ENSCPBG00000008684	RNASEH2B	94	58.553	ENSPCOG00000026623	RNASEH2B	96	58.553	Propithecus_coquereli
ENSCPBG00000008684	RNASEH2B	87	60.163	ENSPVAG00000000508	RNASEH2B	95	59.055	Pteropus_vampyrus
ENSCPBG00000008684	RNASEH2B	95	57.792	ENSPNYG00000013552	rnaseh2b	99	57.792	Pundamilia_nyererei
ENSCPBG00000008684	RNASEH2B	95	54.870	ENSPNAG00000024825	rnaseh2b	99	54.870	Pygocentrus_nattereri
ENSCPBG00000008684	RNASEH2B	94	59.211	ENSRNOG00000009192	Rnaseh2b	99	59.211	Rattus_norvegicus
ENSCPBG00000008684	RNASEH2B	93	52.713	ENSRBIG00000036017	-	96	51.709	Rhinopithecus_bieti
ENSCPBG00000008684	RNASEH2B	90	60.959	ENSRBIG00000028928	-	94	60.959	Rhinopithecus_bieti
ENSCPBG00000008684	RNASEH2B	90	60.959	ENSRROG00000018808	-	94	60.959	Rhinopithecus_roxellana
ENSCPBG00000008684	RNASEH2B	82	53.398	ENSRROG00000044915	-	86	51.101	Rhinopithecus_roxellana
ENSCPBG00000008684	RNASEH2B	90	60.274	ENSSBOG00000008081	RNASEH2B	97	62.731	Saimiri_boliviensis_boliviensis
ENSCPBG00000008684	RNASEH2B	94	73.115	ENSSHAG00000016190	RNASEH2B	99	73.115	Sarcophilus_harrisii
ENSCPBG00000008684	RNASEH2B	94	60.197	ENSSFOG00015010190	rnaseh2b	99	60.197	Scleropages_formosus
ENSCPBG00000008684	RNASEH2B	95	58.117	ENSSMAG00000001546	rnaseh2b	99	58.117	Scophthalmus_maximus
ENSCPBG00000008684	RNASEH2B	95	61.688	ENSSDUG00000007567	rnaseh2b	99	61.688	Seriola_dumerili
ENSCPBG00000008684	RNASEH2B	95	59.740	ENSSLDG00000012485	rnaseh2b	99	59.740	Seriola_lalandi_dorsalis
ENSCPBG00000008684	RNASEH2B	83	77.489	ENSSPUG00000006745	-	95	77.947	Sphenodon_punctatus
ENSCPBG00000008684	RNASEH2B	95	60.714	ENSSPAG00000020926	rnaseh2b	99	60.714	Stegastes_partitus
ENSCPBG00000008684	RNASEH2B	87	59.751	ENSSSCG00000024385	RNASEH2B	95	61.885	Sus_scrofa
ENSCPBG00000008684	RNASEH2B	90	73.307	ENSTGUG00000012104	RNASEH2B	100	76.103	Taeniopygia_guttata
ENSCPBG00000008684	RNASEH2B	95	58.766	ENSTRUG00000015098	rnaseh2b	99	58.766	Takifugu_rubripes
ENSCPBG00000008684	RNASEH2B	95	56.958	ENSTNIG00000013861	rnaseh2b	99	56.958	Tetraodon_nigroviridis
ENSCPBG00000008684	RNASEH2B	87	52.033	ENSTTRG00000010761	RNASEH2B	91	53.191	Tursiops_truncatus
ENSCPBG00000008684	RNASEH2B	87	59.011	ENSUAMG00000022849	RNASEH2B	97	60.294	Ursus_americanus
ENSCPBG00000008684	RNASEH2B	87	58.657	ENSUMAG00000018556	RNASEH2B	97	59.926	Ursus_maritimus
ENSCPBG00000008684	RNASEH2B	86	60.833	ENSVPAG00000005679	RNASEH2B	93	61.852	Vicugna_pacos
ENSCPBG00000008684	RNASEH2B	88	57.292	ENSVVUG00000024015	RNASEH2B	86	57.292	Vulpes_vulpes
ENSCPBG00000008684	RNASEH2B	94	68.954	ENSXETG00000020720	rnaseh2b	99	68.954	Xenopus_tropicalis
ENSCPBG00000008684	RNASEH2B	95	55.195	ENSXCOG00000018732	rnaseh2b	99	55.195	Xiphophorus_couchianus
ENSCPBG00000008684	RNASEH2B	95	55.844	ENSXMAG00000022554	rnaseh2b	99	55.844	Xiphophorus_maculatus