EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCPBG00000008685 (Gene tree)
Gene ID: 101935209
Gene Symbol: RIOK1
Alias: AD034|FLJ30006|RRP10|bA288G3.1
Full Name: RIO kinase 1
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Minus strand
Length: 23651 bases
Position: chrKK088240.1:5138581-5162231
Accession: 18656
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000011376	RIO1	PF01163.22	1.2e-77	1	1
ENSCPBP00000011381	RIO1	PF01163.22	1.2e-77	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000013635	RIOK1-201	2497	-	ENSCPBP00000011376	577 (aa)	-	-
ENSCPBT00000013640	RIOK1-202	2397	-	ENSCPBP00000011381	577 (aa)	-	-

Gene Model

Click here to download ENSCPBG00000008685's gene model file

Pathways

Pathway ID	Pathway Name	Source
cpic03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000008685's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000008685	RIOK1	91	76.296	ENSG00000124784	RIOK1	94	76.173	Homo_sapiens
ENSCPBG00000008685	RIOK1	91	75.797	ENSAMEG00000017367	RIOK1	86	79.918	Ailuropoda_melanoleuca
ENSCPBG00000008685	RIOK1	72	76.145	ENSACIG00000003735	riok1	75	76.585	Amphilophus_citrinellus
ENSCPBG00000008685	RIOK1	82	70.440	ENSAOCG00000011818	riok1	88	70.650	Amphiprion_ocellaris
ENSCPBG00000008685	RIOK1	82	70.021	ENSAPEG00000001345	riok1	88	70.231	Amphiprion_percula
ENSCPBG00000008685	RIOK1	66	80.052	ENSATEG00000006594	riok1	90	80.052	Anabas_testudineus
ENSCPBG00000008685	RIOK1	76	87.244	ENSAPLG00000004196	RIOK1	92	87.244	Anas_platyrhynchos
ENSCPBG00000008685	RIOK1	91	79.773	ENSACAG00000000695	RIOK1	94	78.409	Anolis_carolinensis
ENSCPBG00000008685	RIOK1	91	65.789	ENSANAG00000023777	RIOK1	93	66.541	Aotus_nancymaae
ENSCPBG00000008685	RIOK1	82	73.319	ENSACLG00000015799	riok1	92	69.423	Astatotilapia_calliptera
ENSCPBG00000008685	RIOK1	82	71.774	ENSAMXG00000015286	riok1	85	72.581	Astyanax_mexicanus
ENSCPBG00000008685	RIOK1	91	75.376	ENSBTAG00000013821	RIOK1	94	75.376	Bos_taurus
ENSCPBG00000008685	RIOK1	64	51.762	WBGene00019698	riok-1	64	53.314	Caenorhabditis_elegans
ENSCPBG00000008685	RIOK1	91	76.128	ENSCJAG00000042960	RIOK1	94	76.880	Callithrix_jacchus
ENSCPBG00000008685	RIOK1	91	77.674	ENSCAFG00000009563	RIOK1	94	77.486	Canis_familiaris
ENSCPBG00000008685	RIOK1	93	76.881	ENSCAFG00020013233	RIOK1	98	76.697	Canis_lupus_dingo
ENSCPBG00000008685	RIOK1	91	75.610	ENSCHIG00000001534	RIOK1	94	75.797	Capra_hircus
ENSCPBG00000008685	RIOK1	59	78.592	ENSTSYG00000011368	RIOK1	89	81.443	Carlito_syrichta
ENSCPBG00000008685	RIOK1	74	81.308	ENSCAPG00000008489	RIOK1	92	81.308	Cavia_aperea
ENSCPBG00000008685	RIOK1	91	75.461	ENSCPOG00000009882	RIOK1	94	76.067	Cavia_porcellus
ENSCPBG00000008685	RIOK1	91	76.692	ENSCCAG00000024061	RIOK1	94	77.444	Cebus_capucinus
ENSCPBG00000008685	RIOK1	91	75.940	ENSCATG00000001548	RIOK1	93	79.626	Cercocebus_atys
ENSCPBG00000008685	RIOK1	91	75.655	ENSCLAG00000003522	RIOK1	86	79.878	Chinchilla_lanigera
ENSCPBG00000008685	RIOK1	92	75.281	ENSCSAG00000007396	RIOK1	99	76.030	Chlorocebus_sabaeus
ENSCPBG00000008685	RIOK1	54	66.667	ENSCHOG00000001873	RIOK1	56	66.981	Choloepus_hoffmanni
ENSCPBG00000008685	RIOK1	91	75.752	ENSCANG00000032919	RIOK1	94	76.692	Colobus_angolensis_palliatus
ENSCPBG00000008685	RIOK1	91	71.887	ENSCGRG00001018868	Riok1	86	75.258	Cricetulus_griseus_chok1gshd
ENSCPBG00000008685	RIOK1	91	71.887	ENSCGRG00000008015	Riok1	86	75.258	Cricetulus_griseus_crigri
ENSCPBG00000008685	RIOK1	65	57.105	ENSCSEG00000015014	riok1	69	58.840	Cynoglossus_semilaevis
ENSCPBG00000008685	RIOK1	82	72.464	ENSDARG00000016399	riok1	88	72.464	Danio_rerio
ENSCPBG00000008685	RIOK1	91	75.465	ENSDNOG00000015813	RIOK1	94	75.046	Dasypus_novemcinctus
ENSCPBG00000008685	RIOK1	91	75.888	ENSDORG00000008530	Riok1	94	74.766	Dipodomys_ordii
ENSCPBG00000008685	RIOK1	73	53.196	FBgn0036187	RIOK1	69	55.131	Drosophila_melanogaster
ENSCPBG00000008685	RIOK1	90	76.291	ENSETEG00000020273	RIOK1	94	75.236	Echinops_telfairi
ENSCPBG00000008685	RIOK1	91	59.815	ENSEBUG00000013672	riok1	80	67.177	Eptatretus_burgeri
ENSCPBG00000008685	RIOK1	97	72.438	ENSEASG00005012032	RIOK1	99	72.968	Equus_asinus_asinus
ENSCPBG00000008685	RIOK1	97	72.438	ENSECAG00000009007	RIOK1	99	72.968	Equus_caballus
ENSCPBG00000008685	RIOK1	76	69.091	ENSEEUG00000007123	RIOK1	100	69.091	Erinaceus_europaeus
ENSCPBG00000008685	RIOK1	82	70.928	ENSELUG00000017029	riok1	88	70.807	Esox_lucius
ENSCPBG00000008685	RIOK1	91	74.813	ENSFCAG00000027290	RIOK1	86	78.208	Felis_catus
ENSCPBG00000008685	RIOK1	91	80.075	ENSFALG00000013244	RIOK1	94	80.524	Ficedula_albicollis
ENSCPBG00000008685	RIOK1	92	74.019	ENSFDAG00000019139	RIOK1	87	78.270	Fukomys_damarensis
ENSCPBG00000008685	RIOK1	65	78.249	ENSFHEG00000021419	riok1	98	69.778	Fundulus_heteroclitus
ENSCPBG00000008685	RIOK1	71	73.058	ENSGMOG00000018668	riok1	92	74.873	Gadus_morhua
ENSCPBG00000008685	RIOK1	50	81.164	ENSGALG00000012795	RIOK1	89	80.822	Gallus_gallus
ENSCPBG00000008685	RIOK1	69	67.003	ENSGAFG00000004091	riok1	66	67.347	Gambusia_affinis
ENSCPBG00000008685	RIOK1	84	68.789	ENSGACG00000002496	riok1	81	77.184	Gasterosteus_aculeatus
ENSCPBG00000008685	RIOK1	80	97.180	ENSGAGG00000002262	RIOK1	98	97.180	Gopherus_agassizii
ENSCPBG00000008685	RIOK1	69	77.129	ENSGGOG00000011037	RIOK1	80	76.980	Gorilla_gorilla
ENSCPBG00000008685	RIOK1	93	72.643	ENSHGLG00000008699	RIOK1	87	76.660	Heterocephalus_glaber_female
ENSCPBG00000008685	RIOK1	93	72.828	ENSHGLG00100008188	RIOK1	87	76.861	Heterocephalus_glaber_male
ENSCPBG00000008685	RIOK1	75	72.811	ENSHCOG00000013275	riok1	77	74.818	Hippocampus_comes
ENSCPBG00000008685	RIOK1	82	72.393	ENSIPUG00000003290	riok1	86	72.393	Ictalurus_punctatus
ENSCPBG00000008685	RIOK1	91	75.047	ENSSTOG00000009289	RIOK1	94	76.360	Ictidomys_tridecemlineatus
ENSCPBG00000008685	RIOK1	89	78.058	ENSJJAG00000015152	Riok1	87	78.862	Jaculus_jaculus
ENSCPBG00000008685	RIOK1	67	75.321	ENSKMAG00000019378	riok1	99	75.321	Kryptolebias_marmoratus
ENSCPBG00000008685	RIOK1	75	74.596	ENSLBEG00000016650	riok1	80	73.111	Labrus_bergylta
ENSCPBG00000008685	RIOK1	91	63.993	ENSLACG00000000300	RIOK1	94	63.925	Latimeria_chalumnae
ENSCPBG00000008685	RIOK1	90	70.833	ENSLOCG00000011728	riok1	94	70.810	Lepisosteus_oculatus
ENSCPBG00000008685	RIOK1	91	76.371	ENSLAFG00000005504	RIOK1	95	75.992	Loxodonta_africana
ENSCPBG00000008685	RIOK1	91	75.564	ENSMFAG00000029990	RIOK1	94	76.316	Macaca_fascicularis
ENSCPBG00000008685	RIOK1	91	75.376	ENSMMUG00000015577	RIOK1	94	76.128	Macaca_mulatta
ENSCPBG00000008685	RIOK1	91	71.992	ENSMNEG00000034396	RIOK1	99	77.802	Macaca_nemestrina
ENSCPBG00000008685	RIOK1	91	76.128	ENSMLEG00000026327	RIOK1	94	76.880	Mandrillus_leucophaeus
ENSCPBG00000008685	RIOK1	82	71.882	ENSMAMG00000019557	riok1	86	71.488	Mastacembelus_armatus
ENSCPBG00000008685	RIOK1	82	73.013	ENSMZEG00005019482	riok1	92	69.790	Maylandia_zebra
ENSCPBG00000008685	RIOK1	91	79.434	ENSMGAG00000003816	RIOK1	94	79.434	Meleagris_gallopavo
ENSCPBG00000008685	RIOK1	91	73.019	ENSMAUG00000012751	Riok1	94	72.491	Mesocricetus_auratus
ENSCPBG00000008685	RIOK1	92	76.164	ENSMICG00000044301	RIOK1	80	76.909	Microcebus_murinus
ENSCPBG00000008685	RIOK1	91	72.401	ENSMOCG00000017032	Riok1	94	71.834	Microtus_ochrogaster
ENSCPBG00000008685	RIOK1	68	70.644	ENSMMOG00000020598	riok1	77	71.122	Mola_mola
ENSCPBG00000008685	RIOK1	91	76.822	ENSMODG00000009964	RIOK1	94	75.422	Monodelphis_domestica
ENSCPBG00000008685	RIOK1	67	74.036	ENSMALG00000019982	riok1	81	74.036	Monopterus_albus
ENSCPBG00000008685	RIOK1	90	71.893	MGP_CAROLIEiJ_G0018439	Riok1	84	76.360	Mus_caroli
ENSCPBG00000008685	RIOK1	90	71.429	ENSMUSG00000021428	Riok1	96	71.717	Mus_musculus
ENSCPBG00000008685	RIOK1	90	71.893	MGP_PahariEiJ_G0019507	Riok1	84	76.569	Mus_pahari
ENSCPBG00000008685	RIOK1	90	71.893	MGP_SPRETEiJ_G0019319	Riok1	84	76.778	Mus_spretus
ENSCPBG00000008685	RIOK1	91	75.843	ENSMPUG00000000570	RIOK1	86	79.592	Mustela_putorius_furo
ENSCPBG00000008685	RIOK1	91	75.843	ENSMLUG00000015312	RIOK1	94	75.655	Myotis_lucifugus
ENSCPBG00000008685	RIOK1	91	76.181	ENSNGAG00000021734	Riok1	94	76.181	Nannospalax_galili
ENSCPBG00000008685	RIOK1	69	80.556	ENSNBRG00000017489	riok1	82	75.283	Neolamprologus_brichardi
ENSCPBG00000008685	RIOK1	91	67.857	ENSNLEG00000011621	RIOK1	87	75.311	Nomascus_leucogenys
ENSCPBG00000008685	RIOK1	76	54.091	ENSMEUG00000006679	-	78	53.986	Notamacropus_eugenii
ENSCPBG00000008685	RIOK1	64	79.784	ENSOPRG00000009524	RIOK1	100	79.784	Ochotona_princeps
ENSCPBG00000008685	RIOK1	69	66.833	ENSODEG00000005663	RIOK1	100	64.838	Octodon_degus
ENSCPBG00000008685	RIOK1	72	78.897	ENSONIG00000014010	riok1	74	79.369	Oreochromis_niloticus
ENSCPBG00000008685	RIOK1	74	86.916	ENSOANG00000012553	RIOK1	92	86.916	Ornithorhynchus_anatinus
ENSCPBG00000008685	RIOK1	92	74.954	ENSOCUG00000011824	RIOK1	94	74.307	Oryctolagus_cuniculus
ENSCPBG00000008685	RIOK1	82	71.308	ENSORLG00000008221	riok1	87	70.551	Oryzias_latipes
ENSCPBG00000008685	RIOK1	82	68.365	ENSORLG00020013838	riok1	61	67.505	Oryzias_latipes_hni
ENSCPBG00000008685	RIOK1	82	71.036	ENSORLG00015009817	riok1	86	70.464	Oryzias_latipes_hsok
ENSCPBG00000008685	RIOK1	82	70.021	ENSOMEG00000002758	riok1	77	70.127	Oryzias_melastigma
ENSCPBG00000008685	RIOK1	83	74.538	ENSOGAG00000010192	RIOK1	87	74.338	Otolemur_garnettii
ENSCPBG00000008685	RIOK1	91	76.735	ENSOARG00000017747	RIOK1	94	76.548	Ovis_aries
ENSCPBG00000008685	RIOK1	91	67.837	ENSPPAG00000016349	RIOK1	95	79.734	Pan_paniscus
ENSCPBG00000008685	RIOK1	91	74.627	ENSPPRG00000001932	RIOK1	86	78.004	Panthera_pardus
ENSCPBG00000008685	RIOK1	91	74.813	ENSPTIG00000018545	RIOK1	86	78.208	Panthera_tigris_altaica
ENSCPBG00000008685	RIOK1	91	75.926	ENSPTRG00000017700	RIOK1	94	75.797	Pan_troglodytes
ENSCPBG00000008685	RIOK1	91	76.128	ENSPANG00000016522	RIOK1	94	76.880	Papio_anubis
ENSCPBG00000008685	RIOK1	75	78.182	ENSPKIG00000006442	riok1	74	80.387	Paramormyrops_kingsleyae
ENSCPBG00000008685	RIOK1	93	91.993	ENSPSIG00000006488	RIOK1	94	92.551	Pelodiscus_sinensis
ENSCPBG00000008685	RIOK1	75	66.047	ENSPMGG00000017807	riok1	96	67.778	Periophthalmus_magnuspinnatus
ENSCPBG00000008685	RIOK1	91	73.208	ENSPEMG00000017844	Riok1	94	72.830	Peromyscus_maniculatus_bairdii
ENSCPBG00000008685	RIOK1	56	80.247	ENSPMAG00000006351	riok1	98	67.640	Petromyzon_marinus
ENSCPBG00000008685	RIOK1	92	77.138	ENSPCIG00000012653	RIOK1	95	75.655	Phascolarctos_cinereus
ENSCPBG00000008685	RIOK1	82	66.667	ENSPFOG00000011532	riok1	87	67.442	Poecilia_formosa
ENSCPBG00000008685	RIOK1	82	66.879	ENSPLAG00000001341	riok1	87	67.230	Poecilia_latipinna
ENSCPBG00000008685	RIOK1	82	66.454	ENSPMEG00000007710	riok1	87	67.230	Poecilia_mexicana
ENSCPBG00000008685	RIOK1	82	66.949	ENSPREG00000009237	riok1	75	75.315	Poecilia_reticulata
ENSCPBG00000008685	RIOK1	91	76.340	ENSPPYG00000016207	RIOK1	94	77.528	Pongo_abelii
ENSCPBG00000008685	RIOK1	91	63.894	ENSPCAG00000007892	RIOK1	85	66.736	Procavia_capensis
ENSCPBG00000008685	RIOK1	91	75.560	ENSPVAG00000014091	RIOK1	86	79.226	Pteropus_vampyrus
ENSCPBG00000008685	RIOK1	83	74.380	ENSPNAG00000015435	riok1	85	74.380	Pygocentrus_nattereri
ENSCPBG00000008685	RIOK1	90	73.423	ENSRNOG00000014049	Riok1	83	84.856	Rattus_norvegicus
ENSCPBG00000008685	RIOK1	91	75.514	ENSRBIG00000036685	RIOK1	94	76.692	Rhinopithecus_bieti
ENSCPBG00000008685	RIOK1	91	75.701	ENSRROG00000036611	RIOK1	94	76.880	Rhinopithecus_roxellana
ENSCPBG00000008685	RIOK1	58	40.761	YOR119C	RIO1	71	40.650	Saccharomyces_cerevisiae
ENSCPBG00000008685	RIOK1	92	75.888	ENSSBOG00000012588	RIOK1	99	76.262	Saimiri_boliviensis_boliviensis
ENSCPBG00000008685	RIOK1	83	79.339	ENSSHAG00000003091	RIOK1	93	79.668	Sarcophilus_harrisii
ENSCPBG00000008685	RIOK1	72	81.687	ENSSFOG00015001035	riok1	86	75.574	Scleropages_formosus
ENSCPBG00000008685	RIOK1	82	72.727	ENSSLDG00000017657	riok1	86	71.822	Seriola_lalandi_dorsalis
ENSCPBG00000008685	RIOK1	78	74.444	ENSSPUG00000007624	RIOK1	87	71.881	Sphenodon_punctatus
ENSCPBG00000008685	RIOK1	82	70.921	ENSSPAG00000022710	riok1	87	71.069	Stegastes_partitus
ENSCPBG00000008685	RIOK1	91	74.011	ENSSSCG00000001024	RIOK1	86	77.778	Sus_scrofa
ENSCPBG00000008685	RIOK1	91	80.187	ENSTGUG00000002331	RIOK1	94	80.000	Taeniopygia_guttata
ENSCPBG00000008685	RIOK1	72	62.440	ENSTRUG00000002854	riok1	94	64.508	Takifugu_rubripes
ENSCPBG00000008685	RIOK1	82	64.768	ENSTNIG00000003078	riok1	83	63.445	Tetraodon_nigroviridis
ENSCPBG00000008685	RIOK1	91	73.446	ENSTBEG00000016730	RIOK1	94	72.881	Tupaia_belangeri
ENSCPBG00000008685	RIOK1	83	73.750	ENSTTRG00000017335	RIOK1	100	74.167	Tursiops_truncatus
ENSCPBG00000008685	RIOK1	92	75.514	ENSUAMG00000003721	RIOK1	96	74.579	Ursus_americanus
ENSCPBG00000008685	RIOK1	91	75.235	ENSUMAG00000018461	RIOK1	86	79.303	Ursus_maritimus
ENSCPBG00000008685	RIOK1	91	77.674	ENSVVUG00000005018	RIOK1	94	77.486	Vulpes_vulpes
ENSCPBG00000008685	RIOK1	87	70.891	ENSXETG00000020436	riok1	80	75.664	Xenopus_tropicalis
ENSCPBG00000008685	RIOK1	68	70.305	ENSXCOG00000000245	riok1	85	70.202	Xiphophorus_couchianus
ENSCPBG00000008685	RIOK1	78	68.750	ENSXMAG00000014572	riok1	84	68.973	Xiphophorus_maculatus