EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCPBG00000008766 (Gene tree)
Gene ID: 101945507
Gene Symbol: CPSF2
Alias: CPSF100|KIAA1367
Full Name: cleavage and polyadenylation specific factor 2
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Plus strand
Length: 18439 bases
Position: chrKK088245.1:5268963-5287401
Accession: 2325
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000011502	Beta-Casp	PF10996.8	3.5e-20	1	1
ENSCPBP00000011502	Lactamase_B	PF00753.27	4.7e-05	1	1
ENSCPBP00000011502	RMMBL	PF07521.12	2.5e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000013773	CPSF2-201	2577	-	ENSCPBP00000011502	804 (aa)	-	-

Gene Model

Click here to download ENSCPBG00000008766's gene model file

Pathways

Pathway ID	Pathway Name	Source
cpic03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000008766's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000008766	CPSF2	97	96.296	ENSG00000165934	CPSF2	100	96.296	Homo_sapiens
ENSCPBG00000008766	CPSF2	97	85.551	ENSAPOG00000001242	cpsf2	100	85.551	Acanthochromis_polyacanthus
ENSCPBG00000008766	CPSF2	97	85.443	ENSACIG00000009331	cpsf2	100	85.443	Amphilophus_citrinellus
ENSCPBG00000008766	CPSF2	97	85.551	ENSAOCG00000014095	cpsf2	100	85.551	Amphiprion_ocellaris
ENSCPBG00000008766	CPSF2	97	85.551	ENSAPEG00000009158	cpsf2	100	85.551	Amphiprion_percula
ENSCPBG00000008766	CPSF2	94	86.184	ENSATEG00000017644	cpsf2	100	83.973	Anabas_testudineus
ENSCPBG00000008766	CPSF2	97	97.834	ENSAPLG00000006330	CPSF2	100	97.834	Anas_platyrhynchos
ENSCPBG00000008766	CPSF2	97	95.658	ENSACAG00000009245	CPSF2	100	95.658	Anolis_carolinensis
ENSCPBG00000008766	CPSF2	97	96.296	ENSANAG00000022915	CPSF2	100	96.296	Aotus_nancymaae
ENSCPBG00000008766	CPSF2	97	85.769	ENSAMXG00000018696	cpsf2	100	85.769	Astyanax_mexicanus
ENSCPBG00000008766	CPSF2	97	96.552	ENSBTAG00000010227	CPSF2	100	96.552	Bos_taurus
ENSCPBG00000008766	CPSF2	97	41.218	WBGene00017313	cpsf-2	100	40.867	Caenorhabditis_elegans
ENSCPBG00000008766	CPSF2	97	96.296	ENSCJAG00000018069	CPSF2	100	96.296	Callithrix_jacchus
ENSCPBG00000008766	CPSF2	97	96.424	ENSCAFG00000010909	CPSF2	100	96.424	Canis_familiaris
ENSCPBG00000008766	CPSF2	97	96.424	ENSCAFG00020020670	CPSF2	100	96.424	Canis_lupus_dingo
ENSCPBG00000008766	CPSF2	97	96.552	ENSCHIG00000023848	CPSF2	100	96.552	Capra_hircus
ENSCPBG00000008766	CPSF2	97	95.785	ENSTSYG00000009036	CPSF2	100	95.785	Carlito_syrichta
ENSCPBG00000008766	CPSF2	97	96.552	ENSCPOG00000010899	CPSF2	100	96.552	Cavia_porcellus
ENSCPBG00000008766	CPSF2	97	96.296	ENSCCAG00000028088	CPSF2	100	96.296	Cebus_capucinus
ENSCPBG00000008766	CPSF2	97	96.424	ENSCATG00000030132	CPSF2	100	96.424	Cercocebus_atys
ENSCPBG00000008766	CPSF2	97	96.424	ENSCLAG00000012404	CPSF2	100	96.424	Chinchilla_lanigera
ENSCPBG00000008766	CPSF2	97	96.424	ENSCSAG00000011300	CPSF2	100	96.424	Chlorocebus_sabaeus
ENSCPBG00000008766	CPSF2	97	90.038	ENSCHOG00000012904	CPSF2	100	90.038	Choloepus_hoffmanni
ENSCPBG00000008766	CPSF2	97	54.625	ENSCING00000007881	-	100	54.250	Ciona_intestinalis
ENSCPBG00000008766	CPSF2	91	96.317	ENSCANG00000041651	CPSF2	100	96.317	Colobus_angolensis_palliatus
ENSCPBG00000008766	CPSF2	97	96.296	ENSCGRG00001006901	Cpsf2	100	96.296	Cricetulus_griseus_chok1gshd
ENSCPBG00000008766	CPSF2	97	96.296	ENSCGRG00000012416	Cpsf2	100	96.296	Cricetulus_griseus_crigri
ENSCPBG00000008766	CPSF2	98	83.924	ENSCSEG00000004116	cpsf2	100	83.904	Cynoglossus_semilaevis
ENSCPBG00000008766	CPSF2	97	85.298	ENSCVAG00000000095	cpsf2	100	85.425	Cyprinodon_variegatus
ENSCPBG00000008766	CPSF2	97	85.823	ENSDARG00000028971	cpsf2	100	85.823	Danio_rerio
ENSCPBG00000008766	CPSF2	97	96.679	ENSDNOG00000042757	CPSF2	100	96.679	Dasypus_novemcinctus
ENSCPBG00000008766	CPSF2	97	96.169	ENSDORG00000013709	Cpsf2	100	96.169	Dipodomys_ordii
ENSCPBG00000008766	CPSF2	97	53.051	FBgn0027873	Cpsf100	100	52.809	Drosophila_melanogaster
ENSCPBG00000008766	CPSF2	97	87.372	ENSETEG00000012123	CPSF2	100	87.372	Echinops_telfairi
ENSCPBG00000008766	CPSF2	51	77.206	ENSEBUG00000012098	cpsf2	93	77.206	Eptatretus_burgeri
ENSCPBG00000008766	CPSF2	89	96.246	ENSEASG00005021193	CPSF2	100	96.246	Equus_asinus_asinus
ENSCPBG00000008766	CPSF2	97	96.296	ENSECAG00000023935	CPSF2	100	96.296	Equus_caballus
ENSCPBG00000008766	CPSF2	97	84.944	ENSELUG00000008442	cpsf2	100	84.944	Esox_lucius
ENSCPBG00000008766	CPSF2	97	96.296	ENSFCAG00000007886	CPSF2	100	96.296	Felis_catus
ENSCPBG00000008766	CPSF2	97	98.084	ENSFALG00000002412	CPSF2	100	98.084	Ficedula_albicollis
ENSCPBG00000008766	CPSF2	97	96.424	ENSFDAG00000006327	CPSF2	100	96.424	Fukomys_damarensis
ENSCPBG00000008766	CPSF2	94	84.766	ENSFHEG00000015465	cpsf2	98	85.137	Fundulus_heteroclitus
ENSCPBG00000008766	CPSF2	97	83.859	ENSGMOG00000008761	cpsf2	100	83.859	Gadus_morhua
ENSCPBG00000008766	CPSF2	97	97.573	ENSGALG00000010783	CPSF2	100	97.573	Gallus_gallus
ENSCPBG00000008766	CPSF2	97	85.298	ENSGAFG00000001407	cpsf2	100	85.298	Gambusia_affinis
ENSCPBG00000008766	CPSF2	97	85.171	ENSGACG00000008418	cpsf2	100	85.171	Gasterosteus_aculeatus
ENSCPBG00000008766	CPSF2	97	99.872	ENSGAGG00000008287	CPSF2	100	99.872	Gopherus_agassizii
ENSCPBG00000008766	CPSF2	97	96.296	ENSGGOG00000011799	CPSF2	100	96.296	Gorilla_gorilla
ENSCPBG00000008766	CPSF2	97	85.171	ENSHBUG00000023466	cpsf2	100	85.171	Haplochromis_burtoni
ENSCPBG00000008766	CPSF2	97	96.552	ENSHGLG00000018311	CPSF2	100	96.552	Heterocephalus_glaber_female
ENSCPBG00000008766	CPSF2	97	96.552	ENSHGLG00100016460	CPSF2	100	96.552	Heterocephalus_glaber_male
ENSCPBG00000008766	CPSF2	98	84.703	ENSHCOG00000019527	cpsf2	99	84.703	Hippocampus_comes
ENSCPBG00000008766	CPSF2	97	86.023	ENSIPUG00000020857	cpsf2	100	86.023	Ictalurus_punctatus
ENSCPBG00000008766	CPSF2	97	96.424	ENSSTOG00000009528	CPSF2	100	96.424	Ictidomys_tridecemlineatus
ENSCPBG00000008766	CPSF2	97	96.552	ENSJJAG00000017925	Cpsf2	100	96.552	Jaculus_jaculus
ENSCPBG00000008766	CPSF2	97	84.411	ENSKMAG00000019429	cpsf2	100	84.411	Kryptolebias_marmoratus
ENSCPBG00000008766	CPSF2	92	84.873	ENSLBEG00000011585	cpsf2	100	84.626	Labrus_bergylta
ENSCPBG00000008766	CPSF2	97	89.655	ENSLACG00000019024	CPSF2	100	90.421	Latimeria_chalumnae
ENSCPBG00000008766	CPSF2	97	87.959	ENSLOCG00000014102	cpsf2	100	87.959	Lepisosteus_oculatus
ENSCPBG00000008766	CPSF2	97	96.178	ENSLAFG00000004891	CPSF2	100	96.178	Loxodonta_africana
ENSCPBG00000008766	CPSF2	97	96.424	ENSMFAG00000041212	CPSF2	100	96.424	Macaca_fascicularis
ENSCPBG00000008766	CPSF2	97	96.424	ENSMMUG00000000699	CPSF2	100	96.424	Macaca_mulatta
ENSCPBG00000008766	CPSF2	97	96.424	ENSMNEG00000031584	CPSF2	100	96.424	Macaca_nemestrina
ENSCPBG00000008766	CPSF2	97	96.424	ENSMLEG00000029394	CPSF2	100	96.424	Mandrillus_leucophaeus
ENSCPBG00000008766	CPSF2	97	85.551	ENSMAMG00000004235	cpsf2	100	85.551	Mastacembelus_armatus
ENSCPBG00000008766	CPSF2	97	85.298	ENSMZEG00005001769	cpsf2	100	85.298	Maylandia_zebra
ENSCPBG00000008766	CPSF2	97	97.577	ENSMGAG00000013122	CPSF2	100	97.577	Meleagris_gallopavo
ENSCPBG00000008766	CPSF2	97	96.424	ENSMAUG00000015160	Cpsf2	100	96.424	Mesocricetus_auratus
ENSCPBG00000008766	CPSF2	97	96.552	ENSMICG00000016441	CPSF2	100	96.552	Microcebus_murinus
ENSCPBG00000008766	CPSF2	97	96.296	ENSMOCG00000015372	Cpsf2	100	96.296	Microtus_ochrogaster
ENSCPBG00000008766	CPSF2	97	81.369	ENSMMOG00000015590	cpsf2	100	81.369	Mola_mola
ENSCPBG00000008766	CPSF2	97	97.063	ENSMODG00000002042	CPSF2	100	97.063	Monodelphis_domestica
ENSCPBG00000008766	CPSF2	97	82.763	ENSMALG00000022275	cpsf2	100	82.763	Monopterus_albus
ENSCPBG00000008766	CPSF2	97	95.402	ENSMUSG00000041781	Cpsf2	100	95.402	Mus_musculus
ENSCPBG00000008766	CPSF2	97	95.658	MGP_PahariEiJ_G0029791	Cpsf2	100	95.658	Mus_pahari
ENSCPBG00000008766	CPSF2	97	95.402	MGP_SPRETEiJ_G0018877	Cpsf2	100	95.402	Mus_spretus
ENSCPBG00000008766	CPSF2	98	96.306	ENSMPUG00000007617	CPSF2	98	96.306	Mustela_putorius_furo
ENSCPBG00000008766	CPSF2	97	96.169	ENSMLUG00000005570	CPSF2	100	96.169	Myotis_lucifugus
ENSCPBG00000008766	CPSF2	97	96.424	ENSNGAG00000020312	Cpsf2	100	96.424	Nannospalax_galili
ENSCPBG00000008766	CPSF2	97	85.443	ENSNBRG00000022402	cpsf2	100	85.443	Neolamprologus_brichardi
ENSCPBG00000008766	CPSF2	97	95.402	ENSNLEG00000017132	CPSF2	100	95.402	Nomascus_leucogenys
ENSCPBG00000008766	CPSF2	89	99.029	ENSMEUG00000008138	CPSF2	91	99.029	Notamacropus_eugenii
ENSCPBG00000008766	CPSF2	84	97.333	ENSOPRG00000008484	-	93	97.333	Ochotona_princeps
ENSCPBG00000008766	CPSF2	97	96.424	ENSODEG00000008682	CPSF2	100	96.424	Octodon_degus
ENSCPBG00000008766	CPSF2	97	85.678	ENSONIG00000005901	cpsf2	100	85.678	Oreochromis_niloticus
ENSCPBG00000008766	CPSF2	97	96.296	ENSOANG00000003822	CPSF2	100	96.296	Ornithorhynchus_anatinus
ENSCPBG00000008766	CPSF2	97	96.552	ENSOCUG00000005713	CPSF2	100	96.552	Oryctolagus_cuniculus
ENSCPBG00000008766	CPSF2	97	79.848	ENSORLG00000011628	cpsf2	100	79.848	Oryzias_latipes
ENSCPBG00000008766	CPSF2	97	84.791	ENSORLG00020016980	cpsf2	100	84.791	Oryzias_latipes_hni
ENSCPBG00000008766	CPSF2	97	84.791	ENSORLG00015011910	cpsf2	100	84.791	Oryzias_latipes_hsok
ENSCPBG00000008766	CPSF2	97	84.284	ENSOMEG00000022876	cpsf2	100	84.411	Oryzias_melastigma
ENSCPBG00000008766	CPSF2	97	93.503	ENSOARG00000012889	CPSF2	100	93.503	Ovis_aries
ENSCPBG00000008766	CPSF2	97	96.296	ENSPPAG00000039666	CPSF2	100	96.296	Pan_paniscus
ENSCPBG00000008766	CPSF2	97	96.292	ENSPPRG00000010869	CPSF2	100	96.292	Panthera_pardus
ENSCPBG00000008766	CPSF2	97	96.296	ENSPTIG00000021202	CPSF2	100	96.296	Panthera_tigris_altaica
ENSCPBG00000008766	CPSF2	97	96.296	ENSPTRG00000006651	CPSF2	100	96.296	Pan_troglodytes
ENSCPBG00000008766	CPSF2	97	96.424	ENSPANG00000017417	CPSF2	100	96.424	Papio_anubis
ENSCPBG00000008766	CPSF2	97	81.449	ENSPKIG00000021453	cpsf2	100	81.449	Paramormyrops_kingsleyae
ENSCPBG00000008766	CPSF2	97	98.595	ENSPSIG00000006289	CPSF2	100	98.595	Pelodiscus_sinensis
ENSCPBG00000008766	CPSF2	74	79.402	ENSPMGG00000002511	cpsf2	100	79.568	Periophthalmus_magnuspinnatus
ENSCPBG00000008766	CPSF2	97	96.424	ENSPEMG00000007917	Cpsf2	100	96.424	Peromyscus_maniculatus_bairdii
ENSCPBG00000008766	CPSF2	97	73.737	ENSPMAG00000006205	cpsf2	100	73.737	Petromyzon_marinus
ENSCPBG00000008766	CPSF2	97	97.063	ENSPCIG00000011393	CPSF2	100	97.063	Phascolarctos_cinereus
ENSCPBG00000008766	CPSF2	97	85.298	ENSPFOG00000018648	cpsf2	100	85.298	Poecilia_formosa
ENSCPBG00000008766	CPSF2	98	85.209	ENSPLAG00000019199	cpsf2	99	85.209	Poecilia_latipinna
ENSCPBG00000008766	CPSF2	94	85.658	ENSPMEG00000012100	cpsf2	100	84.893	Poecilia_mexicana
ENSCPBG00000008766	CPSF2	97	85.298	ENSPREG00000008960	cpsf2	100	85.298	Poecilia_reticulata
ENSCPBG00000008766	CPSF2	62	94.970	ENSPPYG00000029685	-	100	94.970	Pongo_abelii
ENSCPBG00000008766	CPSF2	97	96.041	ENSPCAG00000012477	CPSF2	100	96.041	Procavia_capensis
ENSCPBG00000008766	CPSF2	97	96.296	ENSPCOG00000026387	CPSF2	100	96.296	Propithecus_coquereli
ENSCPBG00000008766	CPSF2	63	97.959	ENSPVAG00000004223	CPSF2	65	97.959	Pteropus_vampyrus
ENSCPBG00000008766	CPSF2	97	85.316	ENSPNYG00000023356	cpsf2	100	85.316	Pundamilia_nyererei
ENSCPBG00000008766	CPSF2	97	86.912	ENSPNAG00000001849	cpsf2	100	86.912	Pygocentrus_nattereri
ENSCPBG00000008766	CPSF2	97	95.785	ENSRNOG00000005733	Cpsf2	100	95.785	Rattus_norvegicus
ENSCPBG00000008766	CPSF2	97	96.424	ENSRBIG00000044792	CPSF2	100	96.424	Rhinopithecus_bieti
ENSCPBG00000008766	CPSF2	97	96.424	ENSRROG00000034875	CPSF2	100	96.424	Rhinopithecus_roxellana
ENSCPBG00000008766	CPSF2	97	96.296	ENSSBOG00000024571	CPSF2	100	96.296	Saimiri_boliviensis_boliviensis
ENSCPBG00000008766	CPSF2	97	97.063	ENSSHAG00000010458	CPSF2	100	97.063	Sarcophilus_harrisii
ENSCPBG00000008766	CPSF2	97	87.548	ENSSFOG00015002117	cpsf2	100	87.548	Scleropages_formosus
ENSCPBG00000008766	CPSF2	97	84.918	ENSSMAG00000002001	cpsf2	100	85.425	Scophthalmus_maximus
ENSCPBG00000008766	CPSF2	97	86.058	ENSSDUG00000004084	cpsf2	100	86.058	Seriola_dumerili
ENSCPBG00000008766	CPSF2	97	85.551	ENSSLDG00000024330	cpsf2	100	85.551	Seriola_lalandi_dorsalis
ENSCPBG00000008766	CPSF2	56	100.000	ENSSARG00000009784	-	63	100.000	Sorex_araneus
ENSCPBG00000008766	CPSF2	97	97.573	ENSSPUG00000013485	CPSF2	100	97.573	Sphenodon_punctatus
ENSCPBG00000008766	CPSF2	97	85.044	ENSSPAG00000013284	cpsf2	100	85.044	Stegastes_partitus
ENSCPBG00000008766	CPSF2	97	96.424	ENSSSCG00000002447	CPSF2	100	96.424	Sus_scrofa
ENSCPBG00000008766	CPSF2	97	97.957	ENSTGUG00000012571	-	100	97.957	Taeniopygia_guttata
ENSCPBG00000008766	CPSF2	97	84.791	ENSTRUG00000003742	cpsf2	100	84.791	Takifugu_rubripes
ENSCPBG00000008766	CPSF2	97	83.692	ENSTNIG00000012228	cpsf2	100	84.450	Tetraodon_nigroviridis
ENSCPBG00000008766	CPSF2	89	100.000	ENSTBEG00000004530	CPSF2	94	100.000	Tupaia_belangeri
ENSCPBG00000008766	CPSF2	86	97.917	ENSTTRG00000008697	CPSF2	88	97.917	Tursiops_truncatus
ENSCPBG00000008766	CPSF2	97	96.552	ENSUAMG00000028071	CPSF2	100	96.552	Ursus_americanus
ENSCPBG00000008766	CPSF2	97	96.552	ENSUMAG00000005029	CPSF2	100	97.585	Ursus_maritimus
ENSCPBG00000008766	CPSF2	97	96.419	ENSVPAG00000003503	CPSF2	100	96.419	Vicugna_pacos
ENSCPBG00000008766	CPSF2	97	96.424	ENSVVUG00000024642	CPSF2	100	96.424	Vulpes_vulpes
ENSCPBG00000008766	CPSF2	97	91.954	ENSXETG00000010289	cpsf2	100	91.954	Xenopus_tropicalis
ENSCPBG00000008766	CPSF2	97	85.551	ENSXCOG00000001764	cpsf2	100	85.551	Xiphophorus_couchianus
ENSCPBG00000008766	CPSF2	97	85.678	ENSXMAG00000017048	cpsf2	100	85.678	Xiphophorus_maculatus