EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPBG00000008825 (Gene tree)
Gene ID: -
Gene Symbol: RPUSD3
Alias: MGC29784
Full Name: RNA pseudouridine synthase D3
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Plus strand
Length: 3621 bases
Position: chrKK083069.1:1489341-1492961
Accession: 28437
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000011593	PseudoU_synth_2	PF00849.22	5e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000013872	RPUSD3-201	1788	-	ENSCPBP00000011593	261 (aa)	-	-

Gene Model

Click here to download ENSCPBG00000008825's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000008825's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000008825	RPUSD3	95	53.307	ENSG00000156990	RPUSD3	82	57.143	Homo_sapiens
ENSCPBG00000008825	RPUSD3	95	52.529	ENSAMEG00000016227	RPUSD3	73	53.307	Ailuropoda_melanoleuca
ENSCPBG00000008825	RPUSD3	93	62.249	ENSACAG00000009836	RPUSD3	71	59.839	Anolis_carolinensis
ENSCPBG00000008825	RPUSD3	56	56.463	ENSANAG00000038118	-	70	56.463	Aotus_nancymaae
ENSCPBG00000008825	RPUSD3	59	47.561	ENSANAG00000007127	-	59	46.281	Aotus_nancymaae
ENSCPBG00000008825	RPUSD3	66	50.829	ENSANAG00000019945	-	68	48.352	Aotus_nancymaae
ENSCPBG00000008825	RPUSD3	95	53.307	ENSBTAG00000007968	RPUSD3	74	53.696	Bos_taurus
ENSCPBG00000008825	RPUSD3	95	53.307	ENSCAFG00000029733	RPUSD3	73	54.475	Canis_familiaris
ENSCPBG00000008825	RPUSD3	97	52.672	ENSCAFG00020008582	RPUSD3	79	53.817	Canis_lupus_dingo
ENSCPBG00000008825	RPUSD3	95	53.876	ENSCHIG00000026027	RPUSD3	63	55.238	Capra_hircus
ENSCPBG00000008825	RPUSD3	92	55.020	ENSTSYG00000009994	RPUSD3	73	53.846	Carlito_syrichta
ENSCPBG00000008825	RPUSD3	97	53.257	ENSCAPG00000017559	RPUSD3	87	57.672	Cavia_aperea
ENSCPBG00000008825	RPUSD3	97	52.672	ENSCPOG00000037956	RPUSD3	59	56.190	Cavia_porcellus
ENSCPBG00000008825	RPUSD3	95	56.589	ENSCCAG00000029530	RPUSD3	74	57.085	Cebus_capucinus
ENSCPBG00000008825	RPUSD3	95	55.814	ENSCATG00000036939	RPUSD3	73	56.275	Cercocebus_atys
ENSCPBG00000008825	RPUSD3	95	54.651	ENSCSAG00000010506	RPUSD3	73	54.086	Chlorocebus_sabaeus
ENSCPBG00000008825	RPUSD3	95	55.642	ENSCANG00000040711	RPUSD3	73	55.466	Colobus_angolensis_palliatus
ENSCPBG00000008825	RPUSD3	95	50.973	ENSCGRG00001004923	Rpusd3	71	49.416	Cricetulus_griseus_chok1gshd
ENSCPBG00000008825	RPUSD3	95	50.973	ENSCGRG00000018315	Rpusd3	74	49.416	Cricetulus_griseus_crigri
ENSCPBG00000008825	RPUSD3	95	52.326	ENSDNOG00000039160	RPUSD3	68	52.918	Dasypus_novemcinctus
ENSCPBG00000008825	RPUSD3	96	55.472	ENSDORG00000026827	Rpusd3	91	53.435	Dipodomys_ordii
ENSCPBG00000008825	RPUSD3	93	54.183	ENSETEG00000006538	RPUSD3	71	52.800	Echinops_telfairi
ENSCPBG00000008825	RPUSD3	65	43.787	ENSEBUG00000015605	RPUSD3	55	43.787	Eptatretus_burgeri
ENSCPBG00000008825	RPUSD3	84	56.109	ENSEASG00005014160	RPUSD3	71	55.253	Equus_asinus_asinus
ENSCPBG00000008825	RPUSD3	84	56.109	ENSECAG00000019988	RPUSD3	71	55.253	Equus_caballus
ENSCPBG00000008825	RPUSD3	79	52.582	ENSEEUG00000007353	RPUSD3	60	51.643	Erinaceus_europaeus
ENSCPBG00000008825	RPUSD3	95	52.918	ENSFCAG00000014199	RPUSD3	59	58.500	Felis_catus
ENSCPBG00000008825	RPUSD3	92	62.083	ENSFALG00000012968	RPUSD3	90	62.083	Ficedula_albicollis
ENSCPBG00000008825	RPUSD3	95	55.642	ENSFDAG00000008350	RPUSD3	79	54.086	Fukomys_damarensis
ENSCPBG00000008825	RPUSD3	94	94.286	ENSGAGG00000007493	RPUSD3	79	94.286	Gopherus_agassizii
ENSCPBG00000008825	RPUSD3	95	53.307	ENSGGOG00000013120	RPUSD3	73	55.466	Gorilla_gorilla
ENSCPBG00000008825	RPUSD3	95	51.751	ENSHGLG00000011722	RPUSD3	54	54.762	Heterocephalus_glaber_female
ENSCPBG00000008825	RPUSD3	95	51.751	ENSHGLG00100016038	RPUSD3	54	54.762	Heterocephalus_glaber_male
ENSCPBG00000008825	RPUSD3	95	54.264	ENSSTOG00000002125	RPUSD3	73	53.307	Ictidomys_tridecemlineatus
ENSCPBG00000008825	RPUSD3	95	53.696	ENSJJAG00000012679	Rpusd3	74	51.751	Jaculus_jaculus
ENSCPBG00000008825	RPUSD3	93	56.800	ENSLAFG00000017501	RPUSD3	72	56.400	Loxodonta_africana
ENSCPBG00000008825	RPUSD3	95	55.426	ENSMFAG00000032407	RPUSD3	73	55.870	Macaca_fascicularis
ENSCPBG00000008825	RPUSD3	95	55.814	ENSMMUG00000010628	RPUSD3	80	55.253	Macaca_mulatta
ENSCPBG00000008825	RPUSD3	95	55.426	ENSMNEG00000040308	RPUSD3	73	55.870	Macaca_nemestrina
ENSCPBG00000008825	RPUSD3	95	55.814	ENSMLEG00000033940	RPUSD3	73	56.275	Mandrillus_leucophaeus
ENSCPBG00000008825	RPUSD3	97	51.154	ENSMAUG00000015473	Rpusd3	75	49.615	Mesocricetus_auratus
ENSCPBG00000008825	RPUSD3	95	54.264	ENSMICG00000002315	RPUSD3	74	53.307	Microcebus_murinus
ENSCPBG00000008825	RPUSD3	95	52.140	ENSMOCG00000022613	Rpusd3	61	54.762	Microtus_ochrogaster
ENSCPBG00000008825	RPUSD3	92	58.197	ENSMODG00000005210	RPUSD3	64	56.967	Monodelphis_domestica
ENSCPBG00000008825	RPUSD3	95	52.529	MGP_CAROLIEiJ_G0028725	Rpusd3	72	54.359	Mus_caroli
ENSCPBG00000008825	RPUSD3	95	53.696	ENSMUSG00000051169	Rpusd3	72	54.872	Mus_musculus
ENSCPBG00000008825	RPUSD3	95	52.529	MGP_PahariEiJ_G0022476	Rpusd3	72	54.872	Mus_pahari
ENSCPBG00000008825	RPUSD3	95	53.307	MGP_SPRETEiJ_G0029753	Rpusd3	72	54.872	Mus_spretus
ENSCPBG00000008825	RPUSD3	93	54.000	ENSMPUG00000017132	RPUSD3	71	55.200	Mustela_putorius_furo
ENSCPBG00000008825	RPUSD3	95	55.253	ENSMLUG00000006135	RPUSD3	60	58.095	Myotis_lucifugus
ENSCPBG00000008825	RPUSD3	95	53.696	ENSNGAG00000023704	Rpusd3	78	51.527	Nannospalax_galili
ENSCPBG00000008825	RPUSD3	61	54.037	ENSNLEG00000004214	RPUSD3	70	54.667	Nomascus_leucogenys
ENSCPBG00000008825	RPUSD3	92	59.016	ENSMEUG00000013098	-	95	59.016	Notamacropus_eugenii
ENSCPBG00000008825	RPUSD3	80	47.143	ENSOPRG00000002300	RPUSD3	60	47.143	Ochotona_princeps
ENSCPBG00000008825	RPUSD3	95	53.125	ENSODEG00000018137	RPUSD3	90	52.490	Octodon_degus
ENSCPBG00000008825	RPUSD3	92	48.374	ENSOANG00000012081	-	85	47.561	Ornithorhynchus_anatinus
ENSCPBG00000008825	RPUSD3	95	49.434	ENSOCUG00000027885	RPUSD3	76	48.485	Oryctolagus_cuniculus
ENSCPBG00000008825	RPUSD3	97	55.344	ENSOGAG00000012592	RPUSD3	83	54.962	Otolemur_garnettii
ENSCPBG00000008825	RPUSD3	95	54.086	ENSOARG00000005928	RPUSD3	59	55.714	Ovis_aries
ENSCPBG00000008825	RPUSD3	95	52.140	ENSPPAG00000038083	RPUSD3	73	54.251	Pan_paniscus
ENSCPBG00000008825	RPUSD3	95	53.307	ENSPPRG00000024433	RPUSD3	59	59.000	Panthera_pardus
ENSCPBG00000008825	RPUSD3	95	53.696	ENSPTIG00000006828	RPUSD3	61	58.095	Panthera_tigris_altaica
ENSCPBG00000008825	RPUSD3	95	52.140	ENSPTRG00000051760	RPUSD3	73	54.251	Pan_troglodytes
ENSCPBG00000008825	RPUSD3	95	55.814	ENSPANG00000023885	RPUSD3	73	56.275	Papio_anubis
ENSCPBG00000008825	RPUSD3	95	52.529	ENSPEMG00000017245	Rpusd3	74	51.362	Peromyscus_maniculatus_bairdii
ENSCPBG00000008825	RPUSD3	92	57.377	ENSPCIG00000021901	RPUSD3	71	57.377	Phascolarctos_cinereus
ENSCPBG00000008825	RPUSD3	95	53.307	ENSPPYG00000013676	RPUSD3	73	55.642	Pongo_abelii
ENSCPBG00000008825	RPUSD3	59	55.556	ENSPCAG00000013731	-	53	55.556	Procavia_capensis
ENSCPBG00000008825	RPUSD3	95	55.814	ENSPCOG00000018314	RPUSD3	73	55.870	Propithecus_coquereli
ENSCPBG00000008825	RPUSD3	95	54.475	ENSPVAG00000011107	RPUSD3	73	54.475	Pteropus_vampyrus
ENSCPBG00000008825	RPUSD3	92	53.441	ENSRNOG00000009084	Rpusd3	77	53.441	Rattus_norvegicus
ENSCPBG00000008825	RPUSD3	95	55.642	ENSRBIG00000041230	RPUSD3	73	55.466	Rhinopithecus_bieti
ENSCPBG00000008825	RPUSD3	95	55.039	ENSRROG00000043328	RPUSD3	73	54.475	Rhinopithecus_roxellana
ENSCPBG00000008825	RPUSD3	95	56.589	ENSSBOG00000036106	RPUSD3	74	57.085	Saimiri_boliviensis_boliviensis
ENSCPBG00000008825	RPUSD3	92	54.918	ENSSHAG00000015536	RPUSD3	79	50.820	Sarcophilus_harrisii
ENSCPBG00000008825	RPUSD3	95	52.529	ENSSSCG00000011555	RPUSD3	59	58.095	Sus_scrofa
ENSCPBG00000008825	RPUSD3	76	64.824	ENSTGUG00000008744	RPUSD3	85	64.824	Taeniopygia_guttata
ENSCPBG00000008825	RPUSD3	62	55.828	ENSTBEG00000000176	RPUSD3	65	54.737	Tupaia_belangeri
ENSCPBG00000008825	RPUSD3	93	55.600	ENSTTRG00000007544	RPUSD3	71	56.000	Tursiops_truncatus
ENSCPBG00000008825	RPUSD3	93	53.200	ENSUAMG00000011354	RPUSD3	78	54.000	Ursus_americanus
ENSCPBG00000008825	RPUSD3	95	52.529	ENSUMAG00000018830	RPUSD3	73	53.307	Ursus_maritimus
ENSCPBG00000008825	RPUSD3	95	53.696	ENSVVUG00000023735	RPUSD3	74	54.864	Vulpes_vulpes
ENSCPBG00000008825	RPUSD3	93	56.400	ENSXETG00000023546	rpusd3	88	56.000	Xenopus_tropicalis