EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000008908 (Gene tree)
Gene ID: 101951072
Gene Symbol: CNOT6
Alias: CCR4|Ccr4a|KIAA1194
Full Name: CCR4-NOT transcription complex subunit 6
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Plus strand
Length: 46834 bases
Position: chr8:3954029-4000862
Accession: 14099
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000011729	Exo_endo_phos	PF03372.23	1.6e-20	1	1
ENSCPBP00000011731	Exo_endo_phos	PF03372.23	1.6e-20	1	1
ENSCPBP00000011734	Exo_endo_phos	PF03372.23	1.6e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000014025	CNOT6-202	3392	-	ENSCPBP00000011731	557 (aa)	XP_005295917	UPI000388DE0A
ENSCPBT00000014020	CNOT6-201	3770	-	ENSCPBP00000011729	557 (aa)	XP_005295917	UPI000388DE0A
ENSCPBT00000014028	CNOT6-203	3695	-	ENSCPBP00000011734	557 (aa)	XP_005295917	UPI000388DE0A

Gene Model

Click here to download ENSCPBG00000008908's gene model file

Pathways

Pathway ID	Pathway Name	Source
cpic03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000008908's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000008908	CNOT6	100	77.957	ENSCPBG00000019403	CNOT6L	100	77.957

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000008908	CNOT6	100	95.153	ENSG00000113300	CNOT6	100	95.153	Homo_sapiens
ENSCPBG00000008908	CNOT6	100	88.014	ENSAPOG00000009994	cnot6b	100	87.657	Acanthochromis_polyacanthus
ENSCPBG00000008908	CNOT6	100	95.886	ENSAMEG00000000949	CNOT6	99	95.886	Ailuropoda_melanoleuca
ENSCPBG00000008908	CNOT6	100	86.762	ENSACIG00000016566	cnot6b	100	86.404	Amphilophus_citrinellus
ENSCPBG00000008908	CNOT6	100	88.014	ENSAOCG00000006893	cnot6b	100	87.657	Amphiprion_ocellaris
ENSCPBG00000008908	CNOT6	100	88.014	ENSAPEG00000016949	cnot6b	100	87.657	Amphiprion_percula
ENSCPBG00000008908	CNOT6	100	86.225	ENSATEG00000007862	cnot6b	100	85.868	Anabas_testudineus
ENSCPBG00000008908	CNOT6	100	98.205	ENSAPLG00000012715	CNOT6	99	98.205	Anas_platyrhynchos
ENSCPBG00000008908	CNOT6	100	95.871	ENSACAG00000016548	CNOT6	100	95.871	Anolis_carolinensis
ENSCPBG00000008908	CNOT6	100	95.512	ENSANAG00000030436	CNOT6	96	95.512	Aotus_nancymaae
ENSCPBG00000008908	CNOT6	100	85.868	ENSACLG00000008279	cnot6b	100	86.404	Astatotilapia_calliptera
ENSCPBG00000008908	CNOT6	100	85.842	ENSAMXG00000034694	cnot6b	100	85.842	Astyanax_mexicanus
ENSCPBG00000008908	CNOT6	100	87.993	ENSAMXG00000019140	cnot6a	100	87.993	Astyanax_mexicanus
ENSCPBG00000008908	CNOT6	100	95.332	ENSBTAG00000017362	CNOT6	100	95.332	Bos_taurus
ENSCPBG00000008908	CNOT6	100	95.332	ENSCJAG00000009795	CNOT6	100	95.332	Callithrix_jacchus
ENSCPBG00000008908	CNOT6	100	96.050	ENSCAFG00000000464	CNOT6	100	96.050	Canis_familiaris
ENSCPBG00000008908	CNOT6	100	96.050	ENSCAFG00020002441	CNOT6	100	96.050	Canis_lupus_dingo
ENSCPBG00000008908	CNOT6	100	95.153	ENSCHIG00000019100	CNOT6	100	95.153	Capra_hircus
ENSCPBG00000008908	CNOT6	100	94.075	ENSTSYG00000003982	CNOT6	100	94.075	Carlito_syrichta
ENSCPBG00000008908	CNOT6	100	90.305	ENSCPOG00000035657	CNOT6	100	90.305	Cavia_porcellus
ENSCPBG00000008908	CNOT6	100	90.844	ENSCCAG00000033670	CNOT6	100	90.844	Cebus_capucinus
ENSCPBG00000008908	CNOT6	100	95.153	ENSCATG00000042014	CNOT6	100	95.153	Cercocebus_atys
ENSCPBG00000008908	CNOT6	100	93.716	ENSCLAG00000010489	CNOT6	100	93.716	Chinchilla_lanigera
ENSCPBG00000008908	CNOT6	100	95.153	ENSCSAG00000008165	CNOT6	100	95.153	Chlorocebus_sabaeus
ENSCPBG00000008908	CNOT6	100	94.973	ENSCHOG00000009680	CNOT6	100	94.973	Choloepus_hoffmanni
ENSCPBG00000008908	CNOT6	100	95.332	ENSCANG00000026756	CNOT6	100	95.332	Colobus_angolensis_palliatus
ENSCPBG00000008908	CNOT6	100	93.357	ENSCGRG00001011452	Cnot6	100	93.357	Cricetulus_griseus_chok1gshd
ENSCPBG00000008908	CNOT6	100	91.741	ENSCGRG00000010407	Cnot6	100	91.741	Cricetulus_griseus_crigri
ENSCPBG00000008908	CNOT6	100	87.120	ENSCSEG00000010939	cnot6b	100	86.762	Cynoglossus_semilaevis
ENSCPBG00000008908	CNOT6	100	86.738	ENSCVAG00000010538	cnot6b	100	86.380	Cyprinodon_variegatus
ENSCPBG00000008908	CNOT6	100	87.276	ENSDARG00000008255	cnot6a	100	87.276	Danio_rerio
ENSCPBG00000008908	CNOT6	100	85.125	ENSDARG00000101072	cnot6b	100	85.125	Danio_rerio
ENSCPBG00000008908	CNOT6	100	95.871	ENSDNOG00000041644	CNOT6	100	95.871	Dasypus_novemcinctus
ENSCPBG00000008908	CNOT6	100	84.201	ENSDORG00000001708	Cnot6	100	84.201	Dipodomys_ordii
ENSCPBG00000008908	CNOT6	100	76.386	ENSETEG00000006975	CNOT6	100	76.386	Echinops_telfairi
ENSCPBG00000008908	CNOT6	90	89.400	ENSEASG00005012957	-	99	89.400	Equus_asinus_asinus
ENSCPBG00000008908	CNOT6	100	94.794	ENSEASG00005012794	-	100	94.794	Equus_asinus_asinus
ENSCPBG00000008908	CNOT6	100	89.228	ENSECAG00000012704	-	99	89.228	Equus_caballus
ENSCPBG00000008908	CNOT6	100	95.512	ENSECAG00000019325	CNOT6	100	95.512	Equus_caballus
ENSCPBG00000008908	CNOT6	100	94.794	ENSEEUG00000015382	CNOT6	100	94.794	Erinaceus_europaeus
ENSCPBG00000008908	CNOT6	100	84.127	ENSELUG00000015981	cnot6b	99	83.422	Esox_lucius
ENSCPBG00000008908	CNOT6	100	83.692	ENSELUG00000024580	cnot6a	100	83.692	Esox_lucius
ENSCPBG00000008908	CNOT6	100	96.230	ENSFCAG00000001881	CNOT6	100	96.230	Felis_catus
ENSCPBG00000008908	CNOT6	100	98.384	ENSFALG00000007699	CNOT6	100	98.384	Ficedula_albicollis
ENSCPBG00000008908	CNOT6	100	93.537	ENSFDAG00000001999	CNOT6	100	93.537	Fukomys_damarensis
ENSCPBG00000008908	CNOT6	65	90.476	ENSFHEG00000013756	cnot6b	94	94.872	Fundulus_heteroclitus
ENSCPBG00000008908	CNOT6	95	86.389	ENSGMOG00000009767	cnot6b	99	86.389	Gadus_morhua
ENSCPBG00000008908	CNOT6	100	98.205	ENSGALG00000034316	CNOT6	100	98.205	Gallus_gallus
ENSCPBG00000008908	CNOT6	100	86.559	ENSGAFG00000008525	cnot6b	100	86.201	Gambusia_affinis
ENSCPBG00000008908	CNOT6	95	84.310	ENSGACG00000018046	cnot6b	99	84.310	Gasterosteus_aculeatus
ENSCPBG00000008908	CNOT6	100	83.124	ENSGAGG00000012176	CNOT6	100	83.124	Gopherus_agassizii
ENSCPBG00000008908	CNOT6	100	95.153	ENSGGOG00000003675	CNOT6	100	95.153	Gorilla_gorilla
ENSCPBG00000008908	CNOT6	100	86.047	ENSHBUG00000002819	cnot6b	100	86.583	Haplochromis_burtoni
ENSCPBG00000008908	CNOT6	100	93.716	ENSHGLG00000017756	CNOT6	100	93.716	Heterocephalus_glaber_female
ENSCPBG00000008908	CNOT6	100	93.716	ENSHGLG00100005747	CNOT6	100	93.716	Heterocephalus_glaber_male
ENSCPBG00000008908	CNOT6	100	84.615	ENSHCOG00000016176	cnot6b	100	85.152	Hippocampus_comes
ENSCPBG00000008908	CNOT6	100	86.738	ENSIPUG00000019831	cnot6a	100	86.738	Ictalurus_punctatus
ENSCPBG00000008908	CNOT6	100	85.305	ENSIPUG00000017482	cnot6b	100	85.305	Ictalurus_punctatus
ENSCPBG00000008908	CNOT6	100	95.871	ENSSTOG00000002803	CNOT6	100	95.871	Ictidomys_tridecemlineatus
ENSCPBG00000008908	CNOT6	100	94.075	ENSJJAG00000012296	Cnot6	100	94.075	Jaculus_jaculus
ENSCPBG00000008908	CNOT6	100	87.455	ENSKMAG00000004640	cnot6b	100	87.097	Kryptolebias_marmoratus
ENSCPBG00000008908	CNOT6	100	84.973	ENSLBEG00000027917	cnot6b	100	85.510	Labrus_bergylta
ENSCPBG00000008908	CNOT6	100	91.219	ENSLOCG00000010102	cnot6b	99	91.219	Lepisosteus_oculatus
ENSCPBG00000008908	CNOT6	100	96.050	ENSLAFG00000016742	CNOT6	100	96.050	Loxodonta_africana
ENSCPBG00000008908	CNOT6	100	95.153	ENSMFAG00000030867	CNOT6	100	95.153	Macaca_fascicularis
ENSCPBG00000008908	CNOT6	100	95.153	ENSMMUG00000018690	CNOT6	100	95.153	Macaca_mulatta
ENSCPBG00000008908	CNOT6	100	95.153	ENSMNEG00000038565	CNOT6	100	95.153	Macaca_nemestrina
ENSCPBG00000008908	CNOT6	100	95.153	ENSMLEG00000010555	CNOT6	100	95.153	Mandrillus_leucophaeus
ENSCPBG00000008908	CNOT6	100	88.193	ENSMAMG00000007515	cnot6b	100	87.835	Mastacembelus_armatus
ENSCPBG00000008908	CNOT6	100	85.868	ENSMZEG00005012899	cnot6b	100	86.404	Maylandia_zebra
ENSCPBG00000008908	CNOT6	100	94.434	ENSMAUG00000019798	Cnot6	100	94.434	Mesocricetus_auratus
ENSCPBG00000008908	CNOT6	100	93.716	ENSMICG00000013018	-	100	93.716	Microcebus_murinus
ENSCPBG00000008908	CNOT6	98	85.294	ENSMICG00000028378	-	99	85.294	Microcebus_murinus
ENSCPBG00000008908	CNOT6	100	94.255	ENSMOCG00000021662	Cnot6	100	94.255	Microtus_ochrogaster
ENSCPBG00000008908	CNOT6	100	84.946	ENSMMOG00000003227	cnot6b	100	84.946	Mola_mola
ENSCPBG00000008908	CNOT6	100	96.409	ENSMODG00000003979	CNOT6	100	96.409	Monodelphis_domestica
ENSCPBG00000008908	CNOT6	100	87.835	ENSMALG00000014251	cnot6b	100	87.478	Monopterus_albus
ENSCPBG00000008908	CNOT6	100	94.434	MGP_CAROLIEiJ_G0016277	Cnot6	100	94.434	Mus_caroli
ENSCPBG00000008908	CNOT6	100	94.434	ENSMUSG00000020362	Cnot6	100	94.434	Mus_musculus
ENSCPBG00000008908	CNOT6	100	94.434	MGP_PahariEiJ_G0017413	Cnot6	100	94.434	Mus_pahari
ENSCPBG00000008908	CNOT6	100	94.255	MGP_SPRETEiJ_G0017122	Cnot6	100	94.255	Mus_spretus
ENSCPBG00000008908	CNOT6	100	96.050	ENSMPUG00000000587	CNOT6	96	96.050	Mustela_putorius_furo
ENSCPBG00000008908	CNOT6	100	93.772	ENSMLUG00000010257	CNOT6	100	93.772	Myotis_lucifugus
ENSCPBG00000008908	CNOT6	100	93.178	ENSNGAG00000008269	Cnot6	100	93.178	Nannospalax_galili
ENSCPBG00000008908	CNOT6	100	86.047	ENSNBRG00000010798	cnot6b	100	86.583	Neolamprologus_brichardi
ENSCPBG00000008908	CNOT6	100	93.896	ENSNLEG00000002322	CNOT6	100	93.896	Nomascus_leucogenys
ENSCPBG00000008908	CNOT6	81	96.262	ENSMEUG00000000025	CNOT6	81	96.262	Notamacropus_eugenii
ENSCPBG00000008908	CNOT6	88	94.286	ENSOPRG00000008244	-	88	94.286	Ochotona_princeps
ENSCPBG00000008908	CNOT6	100	92.639	ENSODEG00000007041	CNOT6	100	92.639	Octodon_degus
ENSCPBG00000008908	CNOT6	75	86.761	ENSONIG00000013027	cnot6b	99	86.761	Oreochromis_niloticus
ENSCPBG00000008908	CNOT6	100	95.512	ENSOANG00000010226	CNOT6	100	95.512	Ornithorhynchus_anatinus
ENSCPBG00000008908	CNOT6	100	94.275	ENSOCUG00000011083	CNOT6	100	94.275	Oryctolagus_cuniculus
ENSCPBG00000008908	CNOT6	100	86.047	ENSORLG00000005059	cnot6b	100	85.689	Oryzias_latipes
ENSCPBG00000008908	CNOT6	100	86.047	ENSORLG00020012784	cnot6b	100	85.689	Oryzias_latipes_hni
ENSCPBG00000008908	CNOT6	94	85.086	ENSORLG00015022658	cnot6b	98	84.704	Oryzias_latipes_hsok
ENSCPBG00000008908	CNOT6	100	86.583	ENSOMEG00000005295	cnot6b	100	86.225	Oryzias_melastigma
ENSCPBG00000008908	CNOT6	94	95.420	ENSOGAG00000032470	CNOT6	100	95.420	Otolemur_garnettii
ENSCPBG00000008908	CNOT6	97	95.018	ENSOARG00000001003	CNOT6	100	95.018	Ovis_aries
ENSCPBG00000008908	CNOT6	100	95.153	ENSPPAG00000032253	CNOT6	100	95.153	Pan_paniscus
ENSCPBG00000008908	CNOT6	100	96.050	ENSPPRG00000011912	CNOT6	100	96.050	Panthera_pardus
ENSCPBG00000008908	CNOT6	100	96.050	ENSPTIG00000016794	CNOT6	100	96.050	Panthera_tigris_altaica
ENSCPBG00000008908	CNOT6	100	95.153	ENSPTRG00000017636	CNOT6	100	95.153	Pan_troglodytes
ENSCPBG00000008908	CNOT6	100	95.153	ENSPANG00000016191	CNOT6	100	95.153	Papio_anubis
ENSCPBG00000008908	CNOT6	100	88.351	ENSPKIG00000021368	cnot6b	100	88.351	Paramormyrops_kingsleyae
ENSCPBG00000008908	CNOT6	98	99.632	ENSPSIG00000017307	CNOT6	100	99.632	Pelodiscus_sinensis
ENSCPBG00000008908	CNOT6	100	86.583	ENSPMGG00000011238	cnot6b	100	86.225	Periophthalmus_magnuspinnatus
ENSCPBG00000008908	CNOT6	100	93.357	ENSPEMG00000000627	Cnot6	100	93.357	Peromyscus_maniculatus_bairdii
ENSCPBG00000008908	CNOT6	100	96.589	ENSPCIG00000020319	CNOT6	99	96.589	Phascolarctos_cinereus
ENSCPBG00000008908	CNOT6	100	86.738	ENSPFOG00000006291	cnot6b	100	86.380	Poecilia_formosa
ENSCPBG00000008908	CNOT6	100	83.154	ENSPLAG00000008266	cnot6b	100	82.796	Poecilia_latipinna
ENSCPBG00000008908	CNOT6	100	86.918	ENSPMEG00000009091	cnot6b	100	86.559	Poecilia_mexicana
ENSCPBG00000008908	CNOT6	100	85.842	ENSPREG00000003713	cnot6b	100	85.484	Poecilia_reticulata
ENSCPBG00000008908	CNOT6	100	95.153	ENSPPYG00000016137	CNOT6	100	95.153	Pongo_abelii
ENSCPBG00000008908	CNOT6	71	93.609	ENSPCAG00000005599	-	71	93.609	Procavia_capensis
ENSCPBG00000008908	CNOT6	100	89.946	ENSPCOG00000017359	CNOT6	100	90.664	Propithecus_coquereli
ENSCPBG00000008908	CNOT6	100	90.844	ENSPVAG00000003069	CNOT6	100	90.844	Pteropus_vampyrus
ENSCPBG00000008908	CNOT6	100	85.689	ENSPNYG00000000321	cnot6b	100	86.225	Pundamilia_nyererei
ENSCPBG00000008908	CNOT6	100	86.201	ENSPNAG00000028816	cnot6b	100	86.201	Pygocentrus_nattereri
ENSCPBG00000008908	CNOT6	100	87.814	ENSPNAG00000029586	cnot6a	100	87.814	Pygocentrus_nattereri
ENSCPBG00000008908	CNOT6	100	93.357	ENSRNOG00000054891	Cnot6	100	93.357	Rattus_norvegicus
ENSCPBG00000008908	CNOT6	100	94.973	ENSRBIG00000004309	CNOT6	100	94.973	Rhinopithecus_bieti
ENSCPBG00000008908	CNOT6	100	94.973	ENSRROG00000035378	CNOT6	100	94.973	Rhinopithecus_roxellana
ENSCPBG00000008908	CNOT6	100	95.332	ENSSBOG00000030494	CNOT6	100	95.332	Saimiri_boliviensis_boliviensis
ENSCPBG00000008908	CNOT6	100	96.589	ENSSHAG00000017436	CNOT6	100	96.589	Sarcophilus_harrisii
ENSCPBG00000008908	CNOT6	100	87.634	ENSSFOG00015022383	cnot6a	96	87.634	Scleropages_formosus
ENSCPBG00000008908	CNOT6	100	89.247	ENSSFOG00015015133	CNOT6	100	89.247	Scleropages_formosus
ENSCPBG00000008908	CNOT6	100	85.868	ENSSMAG00000003084	cnot6b	100	85.510	Scophthalmus_maximus
ENSCPBG00000008908	CNOT6	100	87.657	ENSSDUG00000004151	cnot6b	100	87.299	Seriola_dumerili
ENSCPBG00000008908	CNOT6	100	86.762	ENSSLDG00000004448	cnot6b	100	87.299	Seriola_lalandi_dorsalis
ENSCPBG00000008908	CNOT6	64	76.257	ENSSARG00000012650	-	100	76.257	Sorex_araneus
ENSCPBG00000008908	CNOT6	100	97.487	ENSSPUG00000007893	CNOT6	100	97.487	Sphenodon_punctatus
ENSCPBG00000008908	CNOT6	100	87.835	ENSSPAG00000000149	cnot6b	100	87.478	Stegastes_partitus
ENSCPBG00000008908	CNOT6	100	95.153	ENSSSCG00000014009	CNOT6	100	95.153	Sus_scrofa
ENSCPBG00000008908	CNOT6	100	98.025	ENSTGUG00000001119	CNOT6	100	98.025	Taeniopygia_guttata
ENSCPBG00000008908	CNOT6	100	85.099	ENSTRUG00000002818	cnot6b	100	85.099	Takifugu_rubripes
ENSCPBG00000008908	CNOT6	100	85.458	ENSTNIG00000004443	cnot6b	99	85.458	Tetraodon_nigroviridis
ENSCPBG00000008908	CNOT6	87	65.914	ENSTBEG00000017094	-	100	65.914	Tupaia_belangeri
ENSCPBG00000008908	CNOT6	100	95.512	ENSTTRG00000009363	CNOT6	100	95.512	Tursiops_truncatus
ENSCPBG00000008908	CNOT6	77	95.571	ENSUAMG00000004579	CNOT6	88	95.571	Ursus_americanus
ENSCPBG00000008908	CNOT6	100	91.610	ENSUMAG00000024577	CNOT6	100	91.610	Ursus_maritimus
ENSCPBG00000008908	CNOT6	83	93.224	ENSVPAG00000003593	CNOT6	83	93.224	Vicugna_pacos
ENSCPBG00000008908	CNOT6	100	96.050	ENSVVUG00000026940	CNOT6	100	96.050	Vulpes_vulpes
ENSCPBG00000008908	CNOT6	100	83.513	ENSXCOG00000003360	cnot6b	100	83.154	Xiphophorus_couchianus
ENSCPBG00000008908	CNOT6	100	86.918	ENSXMAG00000008730	cnot6b	100	86.559	Xiphophorus_maculatus