EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000008920 (Gene tree)
Gene ID: 101946618
Gene Symbol: SBNO2
Alias: FLJ00173|KIAA0963|Sno|Stno
Full Name: strawberry notch homolog 2
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Plus strand
Length: 89488 bases
Position: chrKK082934.1:824-90311
Accession: 29158
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000012310	ResIII	PF04851.15	2.5e-06	1	1
ENSCPBP00000012855	ResIII	PF04851.15	2.8e-06	1	1
ENSCPBP00000012887	ResIII	PF04851.15	2.8e-06	1	1
ENSCPBP00000012304	ResIII	PF04851.15	2.8e-06	1	1
ENSCPBP00000012731	ResIII	PF04851.15	3e-06	1	1
ENSCPBP00000012315	ResIII	PF04851.15	3e-06	1	1
ENSCPBP00000012440	ResIII	PF04851.15	3.1e-06	1	1
ENSCPBP00000012301	ResIII	PF04851.15	3.2e-06	1	1
ENSCPBP00000012286	ResIII	PF04851.15	3.3e-06	1	1
ENSCPBP00000012728	ResIII	PF04851.15	3.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000014666	SBNO2-202	3738	-	ENSCPBP00000012301	1245 (aa)	-	-
ENSCPBT00000014675	SBNO2-204	3612	-	ENSCPBP00000012310	1203 (aa)	-	-
ENSCPBT00000014815	SBNO2-206	3120	-	ENSCPBP00000012440	1039 (aa)	-	-
ENSCPBT00000014685	SBNO2-205	3804	-	ENSCPBP00000012315	1267 (aa)	-	-
ENSCPBT00000015144	SBNO2-208	3111	-	ENSCPBP00000012731	1036 (aa)	-	-
ENSCPBT00000015325	SBNO2-210	2979	-	ENSCPBP00000012887	992 (aa)	-	-
ENSCPBT00000015140	SBNO2-207	3240	-	ENSCPBP00000012728	1079 (aa)	-	-
ENSCPBT00000014651	SBNO2-201	3530	-	ENSCPBP00000012286	1166 (aa)	-	-
ENSCPBT00000014669	SBNO2-203	3789	-	ENSCPBP00000012304	1262 (aa)	-	-
ENSCPBT00000015289	SBNO2-209	2910	-	ENSCPBP00000012855	969 (aa)	-	-

Gene Model

Click here to download ENSCPBG00000008920's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000008920's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000008920	SBNO2	79	68.707	ENSCPBG00000025968	SBNO1	72	68.707

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000008920	SBNO2	99	68.987	ENSG00000064932	SBNO2	97	71.116	Homo_sapiens
ENSCPBG00000008920	SBNO2	79	83.372	ENSAPOG00000003185	si:ch73-63e15.2	88	69.755	Acanthochromis_polyacanthus
ENSCPBG00000008920	SBNO2	79	83.603	ENSAOCG00000016581	si:ch73-63e15.2	93	73.745	Amphiprion_ocellaris
ENSCPBG00000008920	SBNO2	79	83.603	ENSAPEG00000008862	si:ch73-63e15.2	76	70.457	Amphiprion_percula
ENSCPBG00000008920	SBNO2	80	83.721	ENSATEG00000023838	si:ch73-63e15.2	95	75.130	Anabas_testudineus
ENSCPBG00000008920	SBNO2	96	79.209	ENSAPLG00000007158	SBNO2	99	79.752	Anas_platyrhynchos
ENSCPBG00000008920	SBNO2	99	68.798	ENSANAG00000026685	SBNO2	97	70.755	Aotus_nancymaae
ENSCPBG00000008920	SBNO2	80	82.432	ENSACLG00000005090	si:ch73-63e15.2	72	70.665	Astatotilapia_calliptera
ENSCPBG00000008920	SBNO2	92	69.129	ENSAMXG00000018868	sbno2a	95	73.271	Astyanax_mexicanus
ENSCPBG00000008920	SBNO2	90	71.307	ENSAMXG00000015881	si:ch73-63e15.2	85	68.925	Astyanax_mexicanus
ENSCPBG00000008920	SBNO2	92	77.332	ENSBTAG00000020780	SBNO2	98	71.172	Bos_taurus
ENSCPBG00000008920	SBNO2	91	77.799	ENSCAFG00000019543	SBNO2	93	71.607	Canis_familiaris
ENSCPBG00000008920	SBNO2	91	77.799	ENSCAFG00020017115	SBNO2	92	72.411	Canis_lupus_dingo
ENSCPBG00000008920	SBNO2	92	77.425	ENSCHIG00000026127	SBNO2	95	71.642	Capra_hircus
ENSCPBG00000008920	SBNO2	91	75.117	ENSCAPG00000005731	SBNO2	94	72.688	Cavia_aperea
ENSCPBG00000008920	SBNO2	97	69.157	ENSCPOG00000007477	SBNO2	94	68.990	Cavia_porcellus
ENSCPBG00000008920	SBNO2	99	68.355	ENSCCAG00000037518	SBNO2	97	71.158	Cebus_capucinus
ENSCPBG00000008920	SBNO2	99	68.621	ENSCATG00000037046	SBNO2	97	70.882	Cercocebus_atys
ENSCPBG00000008920	SBNO2	91	76.177	ENSCLAG00000010178	SBNO2	99	73.845	Chinchilla_lanigera
ENSCPBG00000008920	SBNO2	99	68.774	ENSCSAG00000012317	SBNO2	93	71.116	Chlorocebus_sabaeus
ENSCPBG00000008920	SBNO2	91	76.350	ENSCANG00000036745	SBNO2	95	75.661	Colobus_angolensis_palliatus
ENSCPBG00000008920	SBNO2	84	88.278	ENSCGRG00001023960	Sbno2	93	68.529	Cricetulus_griseus_chok1gshd
ENSCPBG00000008920	SBNO2	80	88.278	ENSCGRG00000011984	Sbno2	93	69.969	Cricetulus_griseus_crigri
ENSCPBG00000008920	SBNO2	92	68.070	ENSCSEG00000006856	si:ch73-63e15.2	94	68.348	Cynoglossus_semilaevis
ENSCPBG00000008920	SBNO2	78	85.106	ENSCVAG00000005663	si:ch73-63e15.2	77	69.810	Cyprinodon_variegatus
ENSCPBG00000008920	SBNO2	96	64.914	ENSDARG00000098801	sbno2a	88	65.407	Danio_rerio
ENSCPBG00000008920	SBNO2	92	69.145	ENSDARG00000016188	SBNO2	91	63.170	Danio_rerio
ENSCPBG00000008920	SBNO2	97	72.170	ENSDORG00000002916	Sbno2	94	72.148	Dipodomys_ordii
ENSCPBG00000008920	SBNO2	92	77.239	ENSEASG00005021621	SBNO2	99	70.620	Equus_asinus_asinus
ENSCPBG00000008920	SBNO2	92	77.239	ENSECAG00000011827	SBNO2	99	70.773	Equus_caballus
ENSCPBG00000008920	SBNO2	81	84.245	ENSELUG00000020457	si:ch73-63e15.2	83	69.727	Esox_lucius
ENSCPBG00000008920	SBNO2	91	84.623	ENSFALG00000013988	SBNO2	86	80.084	Ficedula_albicollis
ENSCPBG00000008920	SBNO2	99	66.038	ENSFDAG00000015186	SBNO2	94	67.860	Fukomys_damarensis
ENSCPBG00000008920	SBNO2	95	67.313	ENSFHEG00000022262	si:ch73-63e15.2	79	67.635	Fundulus_heteroclitus
ENSCPBG00000008920	SBNO2	94	68.174	ENSGMOG00000007542	si:ch73-63e15.2	99	68.593	Gadus_morhua
ENSCPBG00000008920	SBNO2	91	87.182	ENSGALG00000037522	SBNO2	97	76.969	Gallus_gallus
ENSCPBG00000008920	SBNO2	91	71.254	ENSGAFG00000004860	si:ch73-63e15.2	91	69.580	Gambusia_affinis
ENSCPBG00000008920	SBNO2	89	73.747	ENSGACG00000013190	si:ch73-63e15.2	97	70.135	Gasterosteus_aculeatus
ENSCPBG00000008920	SBNO2	91	96.623	ENSGAGG00000008348	SBNO2	99	86.777	Gopherus_agassizii
ENSCPBG00000008920	SBNO2	80	82.432	ENSHBUG00000010742	si:ch73-63e15.2	77	69.316	Haplochromis_burtoni
ENSCPBG00000008920	SBNO2	91	76.298	ENSHGLG00000008739	SBNO2	93	71.003	Heterocephalus_glaber_female
ENSCPBG00000008920	SBNO2	90	76.209	ENSHGLG00100005269	SBNO2	99	74.045	Heterocephalus_glaber_male
ENSCPBG00000008920	SBNO2	97	66.828	ENSHCOG00000000884	si:ch73-63e15.2	92	67.451	Hippocampus_comes
ENSCPBG00000008920	SBNO2	89	72.512	ENSIPUG00000019672	sbno2	93	72.953	Ictalurus_punctatus
ENSCPBG00000008920	SBNO2	90	72.340	ENSIPUG00000000537	si:ch73-63e15.2	90	66.074	Ictalurus_punctatus
ENSCPBG00000008920	SBNO2	92	75.974	ENSSTOG00000025832	SBNO2	93	71.777	Ictidomys_tridecemlineatus
ENSCPBG00000008920	SBNO2	97	67.591	ENSJJAG00000017397	Sbno2	94	67.717	Jaculus_jaculus
ENSCPBG00000008920	SBNO2	94	68.058	ENSKMAG00000005541	si:ch73-63e15.2	77	69.837	Kryptolebias_marmoratus
ENSCPBG00000008920	SBNO2	78	84.543	ENSLBEG00000025016	si:ch73-63e15.2	95	75.027	Labrus_bergylta
ENSCPBG00000008920	SBNO2	56	67.115	ENSLBEG00000005937	-	100	68.161	Labrus_bergylta
ENSCPBG00000008920	SBNO2	57	76.492	ENSLACG00000012598	SBNO2	100	76.596	Latimeria_chalumnae
ENSCPBG00000008920	SBNO2	92	73.159	ENSLOCG00000004643	si:ch73-63e15.2	88	68.626	Lepisosteus_oculatus
ENSCPBG00000008920	SBNO2	92	74.074	ENSLAFG00000008824	SBNO2	99	69.704	Loxodonta_africana
ENSCPBG00000008920	SBNO2	99	69.393	ENSMFAG00000040030	SBNO2	97	70.579	Macaca_fascicularis
ENSCPBG00000008920	SBNO2	99	69.195	ENSMMUG00000010886	SBNO2	98	69.643	Macaca_mulatta
ENSCPBG00000008920	SBNO2	99	68.779	ENSMNEG00000039927	SBNO2	97	71.026	Macaca_nemestrina
ENSCPBG00000008920	SBNO2	91	76.564	ENSMLEG00000038556	SBNO2	92	75.116	Mandrillus_leucophaeus
ENSCPBG00000008920	SBNO2	91	70.435	ENSMAMG00000018758	si:ch73-63e15.2	75	69.528	Mastacembelus_armatus
ENSCPBG00000008920	SBNO2	80	82.432	ENSMZEG00005010682	si:ch73-63e15.2	72	70.665	Maylandia_zebra
ENSCPBG00000008920	SBNO2	97	78.196	ENSMGAG00000003801	SBNO2	98	78.864	Meleagris_gallopavo
ENSCPBG00000008920	SBNO2	82	85.938	ENSMAUG00000008034	Sbno2	94	69.302	Mesocricetus_auratus
ENSCPBG00000008920	SBNO2	91	76.851	ENSMICG00000013071	SBNO2	97	70.791	Microcebus_murinus
ENSCPBG00000008920	SBNO2	80	88.517	ENSMOCG00000010504	Sbno2	93	69.921	Microtus_ochrogaster
ENSCPBG00000008920	SBNO2	97	76.536	ENSMODG00000005382	SBNO2	92	73.910	Monodelphis_domestica
ENSCPBG00000008920	SBNO2	82	68.717	ENSMALG00000021831	si:ch73-63e15.2	96	69.247	Monopterus_albus
ENSCPBG00000008920	SBNO2	82	85.714	ENSMUSG00000035673	Sbno2	94	73.093	Mus_musculus
ENSCPBG00000008920	SBNO2	82	85.938	MGP_PahariEiJ_G0030976	Sbno2	94	69.369	Mus_pahari
ENSCPBG00000008920	SBNO2	82	86.161	MGP_SPRETEiJ_G0016381	Sbno2	94	72.222	Mus_spretus
ENSCPBG00000008920	SBNO2	91	77.264	ENSMPUG00000008747	SBNO2	97	77.264	Mustela_putorius_furo
ENSCPBG00000008920	SBNO2	98	68.838	ENSNGAG00000004308	Sbno2	94	69.482	Nannospalax_galili
ENSCPBG00000008920	SBNO2	79	81.179	ENSNBRG00000022968	si:ch73-63e15.2	93	76.331	Neolamprologus_brichardi
ENSCPBG00000008920	SBNO2	87	81.319	ENSNLEG00000001305	SBNO2	96	69.197	Nomascus_leucogenys
ENSCPBG00000008920	SBNO2	72	93.617	ENSMEUG00000013511	-	82	73.333	Notamacropus_eugenii
ENSCPBG00000008920	SBNO2	95	70.820	ENSOPRG00000017238	SBNO2	100	70.670	Ochotona_princeps
ENSCPBG00000008920	SBNO2	97	68.578	ENSODEG00000011822	SBNO2	94	68.882	Octodon_degus
ENSCPBG00000008920	SBNO2	80	82.658	ENSONIG00000002490	si:ch73-63e15.2	91	70.460	Oreochromis_niloticus
ENSCPBG00000008920	SBNO2	80	83.945	ENSORLG00000000913	si:ch73-63e15.2	77	70.306	Oryzias_latipes
ENSCPBG00000008920	SBNO2	80	83.945	ENSORLG00020010978	si:ch73-63e15.2	77	69.939	Oryzias_latipes_hni
ENSCPBG00000008920	SBNO2	80	83.945	ENSORLG00015000202	si:ch73-63e15.2	77	70.306	Oryzias_latipes_hsok
ENSCPBG00000008920	SBNO2	82	82.213	ENSOMEG00000000359	si:ch73-63e15.2	75	69.070	Oryzias_melastigma
ENSCPBG00000008920	SBNO2	92	75.746	ENSOARG00000011130	SBNO2	94	67.453	Ovis_aries
ENSCPBG00000008920	SBNO2	99	69.094	ENSPPAG00000032482	SBNO2	97	71.024	Pan_paniscus
ENSCPBG00000008920	SBNO2	99	69.112	ENSPTRG00000010185	SBNO2	99	70.314	Pan_troglodytes
ENSCPBG00000008920	SBNO2	99	65.997	ENSPANG00000009658	SBNO2	97	67.603	Papio_anubis
ENSCPBG00000008920	SBNO2	88	69.701	ENSPKIG00000009707	-	87	67.956	Paramormyrops_kingsleyae
ENSCPBG00000008920	SBNO2	80	83.108	ENSPKIG00000024201	si:ch73-63e15.2	82	70.511	Paramormyrops_kingsleyae
ENSCPBG00000008920	SBNO2	84	91.667	ENSPSIG00000002852	SBNO2	100	91.667	Pelodiscus_sinensis
ENSCPBG00000008920	SBNO2	93	67.388	ENSPMGG00000014375	si:ch73-63e15.2	89	67.678	Periophthalmus_magnuspinnatus
ENSCPBG00000008920	SBNO2	90	75.740	ENSPEMG00000024122	Sbno2	94	67.649	Peromyscus_maniculatus_bairdii
ENSCPBG00000008920	SBNO2	91	81.715	ENSPCIG00000011264	SBNO2	93	74.481	Phascolarctos_cinereus
ENSCPBG00000008920	SBNO2	78	84.634	ENSPFOG00000004096	si:ch73-63e15.2	99	70.322	Poecilia_formosa
ENSCPBG00000008920	SBNO2	78	84.634	ENSPLAG00000014653	si:ch73-63e15.2	75	70.681	Poecilia_latipinna
ENSCPBG00000008920	SBNO2	78	84.634	ENSPMEG00000002129	si:ch73-63e15.2	91	74.710	Poecilia_mexicana
ENSCPBG00000008920	SBNO2	78	84.634	ENSPREG00000006755	si:ch73-63e15.2	72	70.881	Poecilia_reticulata
ENSCPBG00000008920	SBNO2	78	87.500	ENSPCAG00000012256	SBNO2	87	68.629	Procavia_capensis
ENSCPBG00000008920	SBNO2	99	63.170	ENSPCOG00000015216	SBNO2	97	64.582	Propithecus_coquereli
ENSCPBG00000008920	SBNO2	80	82.432	ENSPNYG00000019926	si:ch73-63e15.2	77	69.316	Pundamilia_nyererei
ENSCPBG00000008920	SBNO2	94	68.118	ENSPNAG00000026609	sbno2a	86	71.818	Pygocentrus_nattereri
ENSCPBG00000008920	SBNO2	91	69.926	ENSPNAG00000020260	si:ch73-63e15.2	82	69.939	Pygocentrus_nattereri
ENSCPBG00000008920	SBNO2	82	86.607	ENSRNOG00000013987	Sbno2	99	69.775	Rattus_norvegicus
ENSCPBG00000008920	SBNO2	91	73.946	ENSRBIG00000009740	SBNO2	86	74.215	Rhinopithecus_bieti
ENSCPBG00000008920	SBNO2	89	77.976	ENSRROG00000044671	SBNO2	98	77.580	Rhinopithecus_roxellana
ENSCPBG00000008920	SBNO2	99	68.323	ENSSBOG00000023562	SBNO2	97	71.271	Saimiri_boliviensis_boliviensis
ENSCPBG00000008920	SBNO2	86	82.171	ENSSHAG00000010241	SBNO2	97	79.274	Sarcophilus_harrisii
ENSCPBG00000008920	SBNO2	92	69.823	ENSSFOG00015005861	si:ch73-63e15.2	93	69.078	Scleropages_formosus
ENSCPBG00000008920	SBNO2	91	70.923	ENSSMAG00000012489	si:ch73-63e15.2	74	70.000	Scophthalmus_maximus
ENSCPBG00000008920	SBNO2	79	83.372	ENSSDUG00000003527	si:ch73-63e15.2	74	70.593	Seriola_dumerili
ENSCPBG00000008920	SBNO2	79	83.372	ENSSLDG00000004623	si:ch73-63e15.2	74	70.294	Seriola_lalandi_dorsalis
ENSCPBG00000008920	SBNO2	92	70.044	ENSSPAG00000017717	si:ch73-63e15.2	75	71.466	Stegastes_partitus
ENSCPBG00000008920	SBNO2	92	77.146	ENSSSCG00000030042	SBNO2	95	72.514	Sus_scrofa
ENSCPBG00000008920	SBNO2	89	70.572	ENSTRUG00000018193	si:ch73-63e15.2	86	71.467	Takifugu_rubripes
ENSCPBG00000008920	SBNO2	91	77.495	ENSUAMG00000006568	SBNO2	93	87.500	Ursus_americanus
ENSCPBG00000008920	SBNO2	91	77.893	ENSVVUG00000022823	SBNO2	93	70.291	Vulpes_vulpes
ENSCPBG00000008920	SBNO2	81	85.160	ENSXETG00000021579	sbno2	91	82.449	Xenopus_tropicalis
ENSCPBG00000008920	SBNO2	71	84.507	ENSXCOG00000009209	si:ch73-63e15.2	91	74.461	Xiphophorus_couchianus
ENSCPBG00000008920	SBNO2	78	84.634	ENSXMAG00000012091	si:ch73-63e15.2	90	67.684	Xiphophorus_maculatus