EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000008955 (Gene tree)
Gene ID: 101937384
Gene Symbol: GPATCH8
Alias: GPATC8|KIAA0553
Full Name: G-patch domain containing 8
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Plus strand
Length: 86545 bases
Position: chrKK082918.1:4136195-4222739
Accession: 29066
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000011802	zf-C2H2_jaz	PF12171.8	3.4e-06	1	1
ENSCPBP00000011797	zf-C2H2_jaz	PF12171.8	3.5e-06	1	1
ENSCPBP00000011794	zf-C2H2_jaz	PF12171.8	3.6e-06	1	1
ENSCPBP00000011798	G-patch	PF01585.23	4.9e-13	1	1
ENSCPBP00000011797	G-patch	PF01585.23	5e-13	1	1
ENSCPBP00000011794	G-patch	PF01585.23	5.1e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000014103	GPATCH8-203	5881	-	ENSCPBP00000011798	1451 (aa)	-	-
ENSCPBT00000014101	GPATCH8-202	5938	XM_005282876	ENSCPBP00000011797	1470 (aa)	XP_005282933	UPI0003890C23
ENSCPBT00000014109	GPATCH8-204	5821	XM_005282878	ENSCPBP00000011802	1421 (aa)	XP_005282935	UPI0003891085
ENSCPBT00000014097	GPATCH8-201	6025	XM_005282875	ENSCPBP00000011794	1499 (aa)	XP_005282932	UPI000388C863

Gene Model

Click here to download ENSCPBG00000008955's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000008955's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000008955	GPATCH8	61	40.254	ENSCPBG00000021243	ZNF804B	63	39.619

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000008955	GPATCH8	54	65.274	ENSG00000186566	GPATCH8	93	100.000	Homo_sapiens
ENSCPBG00000008955	GPATCH8	54	78.922	ENSAPLG00000003095	GPATCH8	99	81.733	Anas_platyrhynchos
ENSCPBG00000008955	GPATCH8	100	73.824	ENSACAG00000012522	GPATCH8	100	73.824	Anolis_carolinensis
ENSCPBG00000008955	GPATCH8	100	69.599	ENSANAG00000032773	GPATCH8	100	69.770	Aotus_nancymaae
ENSCPBG00000008955	GPATCH8	55	63.958	ENSBTAG00000038316	GPATCH8	100	67.211	Bos_taurus
ENSCPBG00000008955	GPATCH8	100	69.317	ENSCJAG00000009807	GPATCH8	100	69.488	Callithrix_jacchus
ENSCPBG00000008955	GPATCH8	50	63.777	ENSCAFG00000014136	GPATCH8	100	69.705	Canis_familiaris
ENSCPBG00000008955	GPATCH8	55	62.134	ENSCHIG00000008962	GPATCH8	99	66.887	Capra_hircus
ENSCPBG00000008955	GPATCH8	90	64.972	ENSTSYG00000033153	GPATCH8	100	65.223	Carlito_syrichta
ENSCPBG00000008955	GPATCH8	99	63.865	ENSCAPG00000004450	GPATCH8	99	62.185	Cavia_aperea
ENSCPBG00000008955	GPATCH8	99	64.229	ENSCPOG00000039068	GPATCH8	100	62.209	Cavia_porcellus
ENSCPBG00000008955	GPATCH8	54	65.394	ENSCCAG00000030686	GPATCH8	100	69.705	Cebus_capucinus
ENSCPBG00000008955	GPATCH8	100	69.448	ENSCATG00000028156	GPATCH8	100	70.144	Cercocebus_atys
ENSCPBG00000008955	GPATCH8	100	69.120	ENSCSAG00000003586	GPATCH8	100	69.816	Chlorocebus_sabaeus
ENSCPBG00000008955	GPATCH8	54	64.558	ENSCANG00000039731	GPATCH8	100	69.967	Colobus_angolensis_palliatus
ENSCPBG00000008955	GPATCH8	100	68.363	ENSCGRG00001020210	Gpatch8	100	68.493	Cricetulus_griseus_chok1gshd
ENSCPBG00000008955	GPATCH8	100	68.363	ENSCGRG00000017090	Gpatch8	100	68.493	Cricetulus_griseus_crigri
ENSCPBG00000008955	GPATCH8	100	68.438	ENSDNOG00000005102	GPATCH8	100	68.110	Dasypus_novemcinctus
ENSCPBG00000008955	GPATCH8	100	68.173	ENSDORG00000027664	Gpatch8	100	68.828	Dipodomys_ordii
ENSCPBG00000008955	GPATCH8	90	72.150	ENSETEG00000001325	GPATCH8	100	65.046	Echinops_telfairi
ENSCPBG00000008955	GPATCH8	67	47.581	ENSEBUG00000005749	gpatch8	67	70.909	Eptatretus_burgeri
ENSCPBG00000008955	GPATCH8	55	64.727	ENSEASG00005010264	GPATCH8	92	70.132	Equus_asinus_asinus
ENSCPBG00000008955	GPATCH8	55	64.608	ENSECAG00000040232	GPATCH8	90	91.538	Equus_caballus
ENSCPBG00000008955	GPATCH8	97	100.000	ENSEEUG00000008586	GPATCH8	94	100.000	Erinaceus_europaeus
ENSCPBG00000008955	GPATCH8	50	64.744	ENSFCAG00000043334	GPATCH8	100	68.325	Felis_catus
ENSCPBG00000008955	GPATCH8	100	76.788	ENSFALG00000009554	GPATCH8	100	78.001	Ficedula_albicollis
ENSCPBG00000008955	GPATCH8	100	72.306	ENSGALG00000041556	GPATCH8	98	91.538	Gallus_gallus
ENSCPBG00000008955	GPATCH8	100	95.330	ENSGAGG00000008358	GPATCH8	100	95.797	Gopherus_agassizii
ENSCPBG00000008955	GPATCH8	54	63.535	ENSGGOG00000013860	GPATCH8	100	69.051	Gorilla_gorilla
ENSCPBG00000008955	GPATCH8	100	63.726	ENSHGLG00000017687	GPATCH8	100	64.092	Heterocephalus_glaber_female
ENSCPBG00000008955	GPATCH8	76	67.434	ENSHGLG00100010738	GPATCH8	98	68.092	Heterocephalus_glaber_male
ENSCPBG00000008955	GPATCH8	100	69.634	ENSSTOG00000025022	GPATCH8	100	69.166	Ictidomys_tridecemlineatus
ENSCPBG00000008955	GPATCH8	100	67.383	ENSJJAG00000017797	Gpatch8	100	67.668	Jaculus_jaculus
ENSCPBG00000008955	GPATCH8	56	59.123	ENSLACG00000017530	GPATCH8	100	62.377	Latimeria_chalumnae
ENSCPBG00000008955	GPATCH8	72	60.584	ENSLAFG00000032250	GPATCH8	99	65.062	Loxodonta_africana
ENSCPBG00000008955	GPATCH8	100	69.317	ENSMFAG00000039126	GPATCH8	100	70.013	Macaca_fascicularis
ENSCPBG00000008955	GPATCH8	100	91.538	ENSMMUG00000012658	GPATCH8	98	91.538	Macaca_mulatta
ENSCPBG00000008955	GPATCH8	100	69.185	ENSMNEG00000031426	GPATCH8	100	69.882	Macaca_nemestrina
ENSCPBG00000008955	GPATCH8	100	69.317	ENSMLEG00000038860	GPATCH8	100	70.013	Mandrillus_leucophaeus
ENSCPBG00000008955	GPATCH8	55	63.077	ENSMAUG00000021770	Gpatch8	100	68.238	Mesocricetus_auratus
ENSCPBG00000008955	GPATCH8	55	65.279	ENSMICG00000028586	GPATCH8	100	69.286	Microcebus_murinus
ENSCPBG00000008955	GPATCH8	55	61.899	ENSMOCG00000001658	Gpatch8	100	67.316	Microtus_ochrogaster
ENSCPBG00000008955	GPATCH8	100	70.105	ENSMODG00000011442	GPATCH8	100	69.921	Monodelphis_domestica
ENSCPBG00000008955	GPATCH8	52	63.204	MGP_CAROLIEiJ_G0017255	Gpatch8	100	67.778	Mus_caroli
ENSCPBG00000008955	GPATCH8	55	62.175	ENSMUSG00000034621	Gpatch8	100	68.125	Mus_musculus
ENSCPBG00000008955	GPATCH8	55	62.220	MGP_PahariEiJ_G0018385	Gpatch8	100	67.316	Mus_pahari
ENSCPBG00000008955	GPATCH8	55	62.130	MGP_SPRETEiJ_G0018098	Gpatch8	100	68.013	Mus_spretus
ENSCPBG00000008955	GPATCH8	54	61.916	ENSMPUG00000009274	GPATCH8	100	69.574	Mustela_putorius_furo
ENSCPBG00000008955	GPATCH8	93	91.275	ENSMLUG00000013840	GPATCH8	99	90.476	Myotis_lucifugus
ENSCPBG00000008955	GPATCH8	55	63.550	ENSNGAG00000021860	Gpatch8	100	68.435	Nannospalax_galili
ENSCPBG00000008955	GPATCH8	77	65.588	ENSMEUG00000011799	GPATCH8	99	66.044	Notamacropus_eugenii
ENSCPBG00000008955	GPATCH8	95	100.000	ENSOPRG00000008816	GPATCH8	93	100.000	Ochotona_princeps
ENSCPBG00000008955	GPATCH8	53	50.423	ENSONIG00000001292	gpatch8	55	42.395	Oreochromis_niloticus
ENSCPBG00000008955	GPATCH8	100	66.754	ENSOCUG00000003291	GPATCH8	100	69.246	Oryctolagus_cuniculus
ENSCPBG00000008955	GPATCH8	100	65.904	ENSOGAG00000033643	GPATCH8	100	68.332	Otolemur_garnettii
ENSCPBG00000008955	GPATCH8	62	94.286	ENSOARG00000008370	GPATCH8	100	62.655	Ovis_aries
ENSCPBG00000008955	GPATCH8	100	69.639	ENSPPAG00000040523	GPATCH8	100	69.770	Pan_paniscus
ENSCPBG00000008955	GPATCH8	54	63.082	ENSPPRG00000023310	GPATCH8	100	70.399	Panthera_pardus
ENSCPBG00000008955	GPATCH8	54	63.082	ENSPTIG00000020001	GPATCH8	100	69.548	Panthera_tigris_altaica
ENSCPBG00000008955	GPATCH8	54	65.036	ENSPTRG00000009278	GPATCH8	100	69.836	Pan_troglodytes
ENSCPBG00000008955	GPATCH8	100	68.110	ENSPANG00000021304	GPATCH8	100	70.144	Papio_anubis
ENSCPBG00000008955	GPATCH8	99	79.172	ENSPSIG00000006255	GPATCH8	99	83.778	Pelodiscus_sinensis
ENSCPBG00000008955	GPATCH8	55	63.540	ENSPEMG00000008337	Gpatch8	100	68.208	Peromyscus_maniculatus_bairdii
ENSCPBG00000008955	GPATCH8	100	68.542	ENSPCIG00000019927	GPATCH8	100	68.006	Phascolarctos_cinereus
ENSCPBG00000008955	GPATCH8	100	67.630	ENSPPYG00000008329	GPATCH8	100	69.271	Pongo_abelii
ENSCPBG00000008955	GPATCH8	79	100.000	ENSPCAG00000004441	GPATCH8	77	100.000	Procavia_capensis
ENSCPBG00000008955	GPATCH8	55	61.831	ENSPCOG00000019209	GPATCH8	100	67.104	Propithecus_coquereli
ENSCPBG00000008955	GPATCH8	100	68.224	ENSPVAG00000003155	GPATCH8	100	69.291	Pteropus_vampyrus
ENSCPBG00000008955	GPATCH8	67	48.454	ENSPNAG00000016200	gpatch8	73	48.083	Pygocentrus_nattereri
ENSCPBG00000008955	GPATCH8	55	62.293	ENSRNOG00000021044	Gpatch8	100	66.949	Rattus_norvegicus
ENSCPBG00000008955	GPATCH8	54	63.484	ENSRBIG00000033713	GPATCH8	100	69.967	Rhinopithecus_bieti
ENSCPBG00000008955	GPATCH8	54	63.484	ENSRROG00000029623	GPATCH8	100	69.967	Rhinopithecus_roxellana
ENSCPBG00000008955	GPATCH8	52	65.878	ENSSBOG00000023544	GPATCH8	100	69.574	Saimiri_boliviensis_boliviensis
ENSCPBG00000008955	GPATCH8	100	70.125	ENSSHAG00000016140	GPATCH8	100	69.856	Sarcophilus_harrisii
ENSCPBG00000008955	GPATCH8	70	53.357	ENSSFOG00015004299	GPATCH8	100	46.943	Scleropages_formosus
ENSCPBG00000008955	GPATCH8	53	78.175	ENSSPUG00000011251	GPATCH8	100	80.982	Sphenodon_punctatus
ENSCPBG00000008955	GPATCH8	55	63.925	ENSSSCG00000017357	ITGA2B	98	91.538	Sus_scrofa
ENSCPBG00000008955	GPATCH8	76	76.687	ENSTBEG00000009486	GPATCH8	91	76.074	Tupaia_belangeri
ENSCPBG00000008955	GPATCH8	88	73.981	ENSTTRG00000010527	GPATCH8	100	63.594	Tursiops_truncatus
ENSCPBG00000008955	GPATCH8	90	64.841	ENSVPAG00000006937	GPATCH8	99	63.408	Vicugna_pacos
ENSCPBG00000008955	GPATCH8	50	63.648	ENSVVUG00000017996	GPATCH8	100	69.608	Vulpes_vulpes