EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCPBG00000009003 (Gene tree)
Gene ID: 101938138
Gene Symbol: RPP40
Alias: RNASEP1|bA428J1.3
Full Name: ribonuclease P/MRP subunit p40
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Plus strand
Length: 18679 bases
Position: chrKK088240.1:6648629-6667307
Accession: 20992
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000011868	Ribonuc_P_40	PF08584.11	5.7e-95	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000014178	RPP40-201	1842	-	ENSCPBP00000011868	364 (aa)	XP_005306034	UPI000388B934

Gene Model

Click here to download ENSCPBG00000009003's gene model file

Pathways

Pathway ID	Pathway Name	Source
cpic03008	Ribosome biogenesis in eukaryotes	KEGG
cpic03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000009003's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000009003	RPP40	99	69.167	ENSG00000124787	RPP40	99	69.868	Homo_sapiens
ENSCPBG00000009003	RPP40	88	32.609	ENSAPOG00000008660	rpp40	92	32.609	Acanthochromis_polyacanthus
ENSCPBG00000009003	RPP40	99	70.000	ENSAMEG00000012938	RPP40	99	70.000	Ailuropoda_melanoleuca
ENSCPBG00000009003	RPP40	99	36.757	ENSACIG00000003617	rpp40	99	36.757	Amphilophus_citrinellus
ENSCPBG00000009003	RPP40	98	38.375	ENSAOCG00000011846	rpp40	99	38.375	Amphiprion_ocellaris
ENSCPBG00000009003	RPP40	98	38.375	ENSAPEG00000001322	rpp40	99	38.375	Amphiprion_percula
ENSCPBG00000009003	RPP40	98	40.669	ENSATEG00000006584	rpp40	99	40.669	Anabas_testudineus
ENSCPBG00000009003	RPP40	83	83.444	ENSAPLG00000005691	RPP40	99	83.444	Anas_platyrhynchos
ENSCPBG00000009003	RPP40	99	77.961	ENSACAG00000006550	RPP40	89	77.961	Anolis_carolinensis
ENSCPBG00000009003	RPP40	99	68.333	ENSANAG00000029246	RPP40	99	68.333	Aotus_nancymaae
ENSCPBG00000009003	RPP40	96	39.601	ENSACLG00000015883	rpp40	95	39.601	Astatotilapia_calliptera
ENSCPBG00000009003	RPP40	98	48.883	ENSAMXG00000001755	rpp40	99	48.883	Astyanax_mexicanus
ENSCPBG00000009003	RPP40	99	70.278	ENSBTAG00000003332	RPP40	99	70.278	Bos_taurus
ENSCPBG00000009003	RPP40	99	68.889	ENSCJAG00000021373	RPP40	99	68.889	Callithrix_jacchus
ENSCPBG00000009003	RPP40	99	70.556	ENSCAFG00000009435	RPP40	99	70.556	Canis_familiaris
ENSCPBG00000009003	RPP40	99	70.556	ENSCAFG00020013380	RPP40	99	70.556	Canis_lupus_dingo
ENSCPBG00000009003	RPP40	99	70.000	ENSCHIG00000016849	RPP40	99	70.861	Capra_hircus
ENSCPBG00000009003	RPP40	99	70.000	ENSTSYG00000032857	RPP40	99	70.861	Carlito_syrichta
ENSCPBG00000009003	RPP40	91	64.653	ENSCAPG00000004957	RPP40	99	64.653	Cavia_aperea
ENSCPBG00000009003	RPP40	99	70.000	ENSCPOG00000005855	RPP40	99	70.000	Cavia_porcellus
ENSCPBG00000009003	RPP40	99	69.167	ENSCCAG00000019809	RPP40	99	69.167	Cebus_capucinus
ENSCPBG00000009003	RPP40	99	69.167	ENSCATG00000038787	RPP40	99	69.167	Cercocebus_atys
ENSCPBG00000009003	RPP40	99	70.833	ENSCLAG00000003235	RPP40	99	70.833	Chinchilla_lanigera
ENSCPBG00000009003	RPP40	99	68.889	ENSCSAG00000007307	RPP40	99	68.889	Chlorocebus_sabaeus
ENSCPBG00000009003	RPP40	69	56.400	ENSCHOG00000005856	-	100	56.400	Choloepus_hoffmanni
ENSCPBG00000009003	RPP40	99	69.444	ENSCANG00000033965	RPP40	99	69.444	Colobus_angolensis_palliatus
ENSCPBG00000009003	RPP40	99	68.333	ENSCGRG00001018328	Rpp40	99	68.333	Cricetulus_griseus_chok1gshd
ENSCPBG00000009003	RPP40	99	68.333	ENSCGRG00000011344	Rpp40	99	68.333	Cricetulus_griseus_crigri
ENSCPBG00000009003	RPP40	98	36.798	ENSCSEG00000015006	-	98	36.798	Cynoglossus_semilaevis
ENSCPBG00000009003	RPP40	74	34.559	ENSCVAG00000012169	rpp40	100	34.559	Cyprinodon_variegatus
ENSCPBG00000009003	RPP40	98	51.811	ENSDARG00000017605	rpp40	99	51.811	Danio_rerio
ENSCPBG00000009003	RPP40	81	66.667	ENSDNOG00000048136	RPP40	99	66.667	Dasypus_novemcinctus
ENSCPBG00000009003	RPP40	99	68.611	ENSDORG00000029944	-	99	68.611	Dipodomys_ordii
ENSCPBG00000009003	RPP40	99	51.482	ENSDORG00000011196	-	99	51.482	Dipodomys_ordii
ENSCPBG00000009003	RPP40	99	56.111	ENSETEG00000007458	RPP40	99	56.111	Echinops_telfairi
ENSCPBG00000009003	RPP40	98	44.507	ENSEBUG00000000386	rpp40	99	44.548	Eptatretus_burgeri
ENSCPBG00000009003	RPP40	99	70.000	ENSEASG00005012116	RPP40	79	70.000	Equus_asinus_asinus
ENSCPBG00000009003	RPP40	99	70.000	ENSECAG00000017247	RPP40	79	70.000	Equus_caballus
ENSCPBG00000009003	RPP40	81	53.061	ENSEEUG00000012087	RPP40	99	53.061	Erinaceus_europaeus
ENSCPBG00000009003	RPP40	98	51.397	ENSELUG00000017004	rpp40	99	51.397	Esox_lucius
ENSCPBG00000009003	RPP40	99	69.722	ENSFCAG00000009249	RPP40	99	69.722	Felis_catus
ENSCPBG00000009003	RPP40	86	80.428	ENSFALG00000013166	RPP40	100	80.428	Ficedula_albicollis
ENSCPBG00000009003	RPP40	81	58.983	ENSFDAG00000000265	-	100	58.983	Fukomys_damarensis
ENSCPBG00000009003	RPP40	99	71.389	ENSFDAG00000013001	-	99	71.389	Fukomys_damarensis
ENSCPBG00000009003	RPP40	98	39.776	ENSFHEG00000021429	rpp40	88	39.776	Fundulus_heteroclitus
ENSCPBG00000009003	RPP40	88	39.752	ENSGMOG00000018653	rpp40	100	39.752	Gadus_morhua
ENSCPBG00000009003	RPP40	100	80.220	ENSGALG00000036074	RPP40	100	80.220	Gallus_gallus
ENSCPBG00000009003	RPP40	82	34.564	ENSGAFG00000004189	-	98	34.564	Gambusia_affinis
ENSCPBG00000009003	RPP40	98	39.216	ENSGACG00000002472	rpp40	99	39.216	Gasterosteus_aculeatus
ENSCPBG00000009003	RPP40	100	96.978	ENSGAGG00000012918	RPP40	100	96.978	Gopherus_agassizii
ENSCPBG00000009003	RPP40	99	69.444	ENSGGOG00000013764	RPP40	99	69.444	Gorilla_gorilla
ENSCPBG00000009003	RPP40	88	38.199	ENSHBUG00000009378	rpp40	92	38.199	Haplochromis_burtoni
ENSCPBG00000009003	RPP40	99	71.944	ENSHGLG00000004871	RPP40	99	71.944	Heterocephalus_glaber_female
ENSCPBG00000009003	RPP40	99	71.944	ENSHGLG00100002080	RPP40	99	71.944	Heterocephalus_glaber_male
ENSCPBG00000009003	RPP40	97	31.445	ENSHCOG00000013264	-	94	31.445	Hippocampus_comes
ENSCPBG00000009003	RPP40	99	49.444	ENSIPUG00000008951	RPP40	99	49.444	Ictalurus_punctatus
ENSCPBG00000009003	RPP40	99	69.252	ENSSTOG00000011199	RPP40	99	69.252	Ictidomys_tridecemlineatus
ENSCPBG00000009003	RPP40	99	66.389	ENSJJAG00000020629	Rpp40	99	66.389	Jaculus_jaculus
ENSCPBG00000009003	RPP40	98	37.535	ENSKMAG00000019358	rpp40	99	37.535	Kryptolebias_marmoratus
ENSCPBG00000009003	RPP40	98	40.896	ENSLBEG00000022724	rpp40	99	40.896	Labrus_bergylta
ENSCPBG00000009003	RPP40	99	62.778	ENSLACG00000014848	RPP40	99	62.778	Latimeria_chalumnae
ENSCPBG00000009003	RPP40	99	54.722	ENSLOCG00000011650	rpp40	99	54.722	Lepisosteus_oculatus
ENSCPBG00000009003	RPP40	83	71.192	ENSLAFG00000007530	RPP40	99	71.192	Loxodonta_africana
ENSCPBG00000009003	RPP40	99	68.889	ENSMFAG00000043100	RPP40	99	68.889	Macaca_fascicularis
ENSCPBG00000009003	RPP40	99	69.167	ENSMMUG00000004966	RPP40	99	69.167	Macaca_mulatta
ENSCPBG00000009003	RPP40	99	68.889	ENSMNEG00000041986	RPP40	99	70.000	Macaca_nemestrina
ENSCPBG00000009003	RPP40	98	62.185	ENSMLEG00000040851	RPP40	100	72.159	Mandrillus_leucophaeus
ENSCPBG00000009003	RPP40	98	40.616	ENSMAMG00000019551	rpp40	98	40.616	Mastacembelus_armatus
ENSCPBG00000009003	RPP40	98	40.056	ENSMZEG00005019475	rpp40	99	40.056	Maylandia_zebra
ENSCPBG00000009003	RPP40	89	80.864	ENSMGAG00000004009	RPP40	90	80.864	Meleagris_gallopavo
ENSCPBG00000009003	RPP40	99	70.000	ENSMAUG00000010268	Rpp40	99	70.000	Mesocricetus_auratus
ENSCPBG00000009003	RPP40	99	68.889	ENSMICG00000003297	RPP40	99	64.167	Microcebus_murinus
ENSCPBG00000009003	RPP40	99	68.611	ENSMOCG00000000305	Rpp40	99	68.611	Microtus_ochrogaster
ENSCPBG00000009003	RPP40	98	32.773	ENSMMOG00000020591	-	99	32.773	Mola_mola
ENSCPBG00000009003	RPP40	99	72.853	ENSMODG00000009826	RPP40	99	72.853	Monodelphis_domestica
ENSCPBG00000009003	RPP40	98	39.776	ENSMALG00000020133	rpp40	99	39.776	Monopterus_albus
ENSCPBG00000009003	RPP40	99	68.611	MGP_CAROLIEiJ_G0018429	Rpp40	99	68.611	Mus_caroli
ENSCPBG00000009003	RPP40	99	70.000	ENSMUSG00000021418	Rpp40	99	70.000	Mus_musculus
ENSCPBG00000009003	RPP40	99	69.444	MGP_PahariEiJ_G0019497	Rpp40	99	69.444	Mus_pahari
ENSCPBG00000009003	RPP40	99	70.000	MGP_SPRETEiJ_G0019309	Rpp40	99	70.000	Mus_spretus
ENSCPBG00000009003	RPP40	99	69.167	ENSMPUG00000000530	RPP40	93	69.167	Mustela_putorius_furo
ENSCPBG00000009003	RPP40	99	67.778	ENSMLUG00000000501	RPP40	99	67.778	Myotis_lucifugus
ENSCPBG00000009003	RPP40	94	62.974	ENSNGAG00000022529	-	99	62.974	Nannospalax_galili
ENSCPBG00000009003	RPP40	99	70.556	ENSNGAG00000023955	-	99	70.556	Nannospalax_galili
ENSCPBG00000009003	RPP40	88	36.533	ENSNBRG00000017465	rpp40	86	36.697	Neolamprologus_brichardi
ENSCPBG00000009003	RPP40	99	69.444	ENSNLEG00000034397	RPP40	99	69.444	Nomascus_leucogenys
ENSCPBG00000009003	RPP40	99	67.222	ENSMEUG00000005300	RPP40	99	67.222	Notamacropus_eugenii
ENSCPBG00000009003	RPP40	88	65.528	ENSODEG00000006170	-	100	65.528	Octodon_degus
ENSCPBG00000009003	RPP40	99	66.389	ENSODEG00000018153	-	99	66.389	Octodon_degus
ENSCPBG00000009003	RPP40	99	70.278	ENSODEG00000007255	-	99	70.278	Octodon_degus
ENSCPBG00000009003	RPP40	98	40.056	ENSONIG00000014016	rpp40	98	40.056	Oreochromis_niloticus
ENSCPBG00000009003	RPP40	83	75.329	ENSOANG00000001200	RPP40	100	75.329	Ornithorhynchus_anatinus
ENSCPBG00000009003	RPP40	98	63.687	ENSOCUG00000000354	RPP40	99	63.687	Oryctolagus_cuniculus
ENSCPBG00000009003	RPP40	99	38.611	ENSORLG00000008242	-	100	38.611	Oryzias_latipes
ENSCPBG00000009003	RPP40	99	38.674	ENSORLG00020013745	-	91	38.674	Oryzias_latipes_hni
ENSCPBG00000009003	RPP40	99	38.889	ENSORLG00015000887	-	100	38.889	Oryzias_latipes_hsok
ENSCPBG00000009003	RPP40	99	39.444	ENSOMEG00000002747	rpp40	100	39.444	Oryzias_melastigma
ENSCPBG00000009003	RPP40	99	70.278	ENSOGAG00000006055	RPP40	99	70.278	Otolemur_garnettii
ENSCPBG00000009003	RPP40	91	69.162	ENSOARG00000018783	RPP40	99	71.523	Ovis_aries
ENSCPBG00000009003	RPP40	99	69.444	ENSPPAG00000023703	RPP40	99	69.444	Pan_paniscus
ENSCPBG00000009003	RPP40	99	69.444	ENSPPRG00000005612	RPP40	99	69.444	Panthera_pardus
ENSCPBG00000009003	RPP40	99	65.000	ENSPTIG00000018847	RPP40	99	65.000	Panthera_tigris_altaica
ENSCPBG00000009003	RPP40	99	69.722	ENSPTRG00000017690	RPP40	99	69.722	Pan_troglodytes
ENSCPBG00000009003	RPP40	99	69.167	ENSPANG00000017865	RPP40	99	69.167	Papio_anubis
ENSCPBG00000009003	RPP40	98	51.955	ENSPKIG00000006311	rpp40	99	51.955	Paramormyrops_kingsleyae
ENSCPBG00000009003	RPP40	61	92.342	ENSPSIG00000007854	RPP40	100	92.342	Pelodiscus_sinensis
ENSCPBG00000009003	RPP40	93	60.534	ENSPEMG00000020809	Rpp40	91	60.534	Peromyscus_maniculatus_bairdii
ENSCPBG00000009003	RPP40	75	48.540	ENSPMAG00000008412	rpp40	99	48.540	Petromyzon_marinus
ENSCPBG00000009003	RPP40	99	73.889	ENSPCIG00000010682	RPP40	99	73.889	Phascolarctos_cinereus
ENSCPBG00000009003	RPP40	98	37.326	ENSPFOG00000011460	rpp40	98	37.326	Poecilia_formosa
ENSCPBG00000009003	RPP40	98	36.975	ENSPLAG00000001334	rpp40	99	36.975	Poecilia_latipinna
ENSCPBG00000009003	RPP40	98	37.815	ENSPMEG00000007721	rpp40	99	37.815	Poecilia_mexicana
ENSCPBG00000009003	RPP40	98	38.655	ENSPREG00000009215	rpp40	99	38.655	Poecilia_reticulata
ENSCPBG00000009003	RPP40	99	68.889	ENSPPYG00000016194	RPP40	99	68.889	Pongo_abelii
ENSCPBG00000009003	RPP40	50	65.746	ENSPCAG00000002700	-	97	65.746	Procavia_capensis
ENSCPBG00000009003	RPP40	99	70.278	ENSPCOG00000003907	RPP40	99	70.278	Propithecus_coquereli
ENSCPBG00000009003	RPP40	99	69.722	ENSPVAG00000011325	RPP40	99	69.722	Pteropus_vampyrus
ENSCPBG00000009003	RPP40	83	38.158	ENSPNYG00000004432	rpp40	99	38.158	Pundamilia_nyererei
ENSCPBG00000009003	RPP40	98	50.000	ENSPNAG00000019125	rpp40	99	50.000	Pygocentrus_nattereri
ENSCPBG00000009003	RPP40	99	68.056	ENSRNOG00000016226	Rpp40	99	69.536	Rattus_norvegicus
ENSCPBG00000009003	RPP40	99	69.167	ENSRBIG00000035800	RPP40	99	70.333	Rhinopithecus_bieti
ENSCPBG00000009003	RPP40	99	69.167	ENSRROG00000039116	RPP40	99	69.167	Rhinopithecus_roxellana
ENSCPBG00000009003	RPP40	99	68.056	ENSSBOG00000020297	RPP40	99	68.056	Saimiri_boliviensis_boliviensis
ENSCPBG00000009003	RPP40	76	74.460	ENSSHAG00000002102	RPP40	100	74.460	Sarcophilus_harrisii
ENSCPBG00000009003	RPP40	98	51.117	ENSSFOG00015001142	rpp40	80	51.117	Scleropages_formosus
ENSCPBG00000009003	RPP40	98	39.496	ENSSDUG00000007202	rpp40	99	39.496	Seriola_dumerili
ENSCPBG00000009003	RPP40	98	39.776	ENSSLDG00000017563	rpp40	99	39.776	Seriola_lalandi_dorsalis
ENSCPBG00000009003	RPP40	100	85.989	ENSSPUG00000017487	-	100	85.989	Sphenodon_punctatus
ENSCPBG00000009003	RPP40	81	81.695	ENSSPUG00000018950	-	100	81.695	Sphenodon_punctatus
ENSCPBG00000009003	RPP40	98	39.776	ENSSPAG00000022716	rpp40	99	39.776	Stegastes_partitus
ENSCPBG00000009003	RPP40	99	69.167	ENSSSCG00000000998	RPP40	99	70.432	Sus_scrofa
ENSCPBG00000009003	RPP40	98	82.402	ENSTGUG00000002258	-	100	82.402	Taeniopygia_guttata
ENSCPBG00000009003	RPP40	97	37.960	ENSTRUG00000003755	rpp40	98	37.960	Takifugu_rubripes
ENSCPBG00000009003	RPP40	99	37.778	ENSTNIG00000003077	rpp40	99	37.778	Tetraodon_nigroviridis
ENSCPBG00000009003	RPP40	69	50.400	ENSTBEG00000014467	-	73	50.400	Tupaia_belangeri
ENSCPBG00000009003	RPP40	98	66.201	ENSTTRG00000007319	RPP40	99	66.201	Tursiops_truncatus
ENSCPBG00000009003	RPP40	99	70.556	ENSUAMG00000002159	RPP40	99	71.854	Ursus_americanus
ENSCPBG00000009003	RPP40	99	70.556	ENSUMAG00000018639	RPP40	93	70.556	Ursus_maritimus
ENSCPBG00000009003	RPP40	80	49.829	ENSVPAG00000004652	-	99	49.829	Vicugna_pacos
ENSCPBG00000009003	RPP40	99	70.833	ENSVVUG00000005451	RPP40	99	70.833	Vulpes_vulpes
ENSCPBG00000009003	RPP40	99	58.449	ENSXETG00000017617	rpp40	99	58.449	Xenopus_tropicalis
ENSCPBG00000009003	RPP40	56	43.411	ENSXCOG00000019991	-	63	42.446	Xiphophorus_couchianus
ENSCPBG00000009003	RPP40	98	32.493	ENSXMAG00000024940	rpp40	98	32.493	Xiphophorus_maculatus