EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCPBG00000009020 (Gene tree)
Gene ID: 101947357
Gene Symbol: SRSF4
Alias: SFRS4|SRP75
Full Name: serine and arginine rich splicing factor 4
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Minus strand
Length: 23942 bases
Position: chrKK082935.1:1591276-1615217
Accession: 10786
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000011891	RRM_1	PF00076.22	5.5e-31	1	2
ENSCPBP00000011891	RRM_1	PF00076.22	5.5e-31	2	2
ENSCPBP00000011895	RRM_1	PF00076.22	1.3e-21	1	2
ENSCPBP00000011895	RRM_1	PF00076.22	1.3e-21	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000014209	SRSF4-202	2055	XM_024105843	ENSCPBP00000011895	501 (aa)	XP_023961611	UPI00046C2E9F
ENSCPBT00000014204	SRSF4-201	2049	XM_005286196	ENSCPBP00000011891	502 (aa)	XP_005286253	UPI000388CA31

Gene Model

Click here to download ENSCPBG00000009020's gene model file

Pathways

Pathway ID	Pathway Name	Source
cpic03040	Spliceosome	KEGG
cpic05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000009020's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000009020	SRSF4	65	90.184	ENSG00000116350	SRSF4	74	98.305	Homo_sapiens
ENSCPBG00000009020	SRSF4	66	87.952	ENSAMEG00000000594	SRSF4	66	84.545	Ailuropoda_melanoleuca
ENSCPBG00000009020	SRSF4	85	75.587	ENSAPLG00000006595	-	56	87.045	Anas_platyrhynchos
ENSCPBG00000009020	SRSF4	92	70.513	ENSANAG00000037134	SRSF4	80	82.738	Aotus_nancymaae
ENSCPBG00000009020	SRSF4	65	89.634	ENSBTAG00000013309	SRSF4	68	83.631	Bos_taurus
ENSCPBG00000009020	SRSF4	72	86.538	ENSCJAG00000047192	SRSF4	66	84.290	Callithrix_jacchus
ENSCPBG00000009020	SRSF4	67	82.353	ENSCAFG00000011669	SRSF4	63	82.667	Canis_familiaris
ENSCPBG00000009020	SRSF4	65	86.280	ENSCAFG00020023963	SRSF4	61	84.068	Canis_lupus_dingo
ENSCPBG00000009020	SRSF4	58	93.471	ENSCHIG00000022096	SRSF4	54	94.681	Capra_hircus
ENSCPBG00000009020	SRSF4	72	86.538	ENSTSYG00000007903	SRSF4	68	83.383	Carlito_syrichta
ENSCPBG00000009020	SRSF4	92	68.534	ENSCAPG00000014747	SRSF4	65	71.835	Cavia_aperea
ENSCPBG00000009020	SRSF4	66	84.639	ENSCPOG00000036234	SRSF4	66	83.384	Cavia_porcellus
ENSCPBG00000009020	SRSF4	65	90.798	ENSCATG00000031440	SRSF4	68	84.366	Cercocebus_atys
ENSCPBG00000009020	SRSF4	66	84.639	ENSCLAG00000009008	SRSF4	66	83.384	Chinchilla_lanigera
ENSCPBG00000009020	SRSF4	65	91.104	ENSCSAG00000001022	SRSF4	68	84.273	Chlorocebus_sabaeus
ENSCPBG00000009020	SRSF4	85	73.770	ENSCHOG00000013858	SRSF4	67	80.528	Choloepus_hoffmanni
ENSCPBG00000009020	SRSF4	65	91.104	ENSCANG00000028667	SRSF4	68	84.273	Colobus_angolensis_palliatus
ENSCPBG00000009020	SRSF4	57	94.718	ENSCGRG00001021115	Srsf4	68	85.498	Cricetulus_griseus_chok1gshd
ENSCPBG00000009020	SRSF4	50	93.952	ENSCGRG00000014137	Srsf4	64	84.014	Cricetulus_griseus_crigri
ENSCPBG00000009020	SRSF4	66	90.691	ENSDNOG00000047961	SRSF4	65	85.542	Dasypus_novemcinctus
ENSCPBG00000009020	SRSF4	66	72.121	ENSDORG00000002459	Srsf4	67	84.545	Dipodomys_ordii
ENSCPBG00000009020	SRSF4	55	100.000	ENSETEG00000009774	SRSF4	68	68.546	Echinops_telfairi
ENSCPBG00000009020	SRSF4	66	90.991	ENSEASG00005010168	SRSF4	66	86.405	Equus_asinus_asinus
ENSCPBG00000009020	SRSF4	66	90.991	ENSECAG00000021350	SRSF4	66	86.405	Equus_caballus
ENSCPBG00000009020	SRSF4	66	83.784	ENSEEUG00000008479	SRSF4	67	83.082	Erinaceus_europaeus
ENSCPBG00000009020	SRSF4	61	56.918	ENSELUG00000017551	srsf4	93	71.538	Esox_lucius
ENSCPBG00000009020	SRSF4	65	89.538	ENSFCAG00000027821	SRSF4	68	84.524	Felis_catus
ENSCPBG00000009020	SRSF4	92	81.897	ENSFALG00000001346	SRSF4	68	82.090	Ficedula_albicollis
ENSCPBG00000009020	SRSF4	59	76.094	ENSFDAG00000007332	SRSF4	65	78.405	Fukomys_damarensis
ENSCPBG00000009020	SRSF4	92	80.172	ENSGALG00000050314	SRSF4	59	88.339	Gallus_gallus
ENSCPBG00000009020	SRSF4	50	61.719	ENSGAFG00000018496	srsf4	65	76.796	Gambusia_affinis
ENSCPBG00000009020	SRSF4	95	93.958	ENSGAGG00000014836	SRSF4	100	96.245	Gopherus_agassizii
ENSCPBG00000009020	SRSF4	65	90.491	ENSGGOG00000002444	SRSF4	68	83.680	Gorilla_gorilla
ENSCPBG00000009020	SRSF4	65	81.846	ENSHGLG00000011842	SRSF4	68	75.964	Heterocephalus_glaber_female
ENSCPBG00000009020	SRSF4	65	81.846	ENSHGLG00100017279	SRSF4	68	75.964	Heterocephalus_glaber_male
ENSCPBG00000009020	SRSF4	58	89.394	ENSHCOG00000012540	srsf4	68	82.065	Hippocampus_comes
ENSCPBG00000009020	SRSF4	66	86.747	ENSSTOG00000015908	SRSF4	67	85.758	Ictidomys_tridecemlineatus
ENSCPBG00000009020	SRSF4	66	72.205	ENSJJAG00000022153	Srsf4	66	84.894	Jaculus_jaculus
ENSCPBG00000009020	SRSF4	58	91.126	ENSLAFG00000002575	SRSF4	60	85.574	Loxodonta_africana
ENSCPBG00000009020	SRSF4	65	91.104	ENSMFAG00000041784	SRSF4	68	84.273	Macaca_fascicularis
ENSCPBG00000009020	SRSF4	58	90.034	ENSMMUG00000007110	SRSF4	62	82.450	Macaca_mulatta
ENSCPBG00000009020	SRSF4	65	91.104	ENSMNEG00000034931	SRSF4	68	84.273	Macaca_nemestrina
ENSCPBG00000009020	SRSF4	65	91.104	ENSMLEG00000031619	SRSF4	68	84.661	Mandrillus_leucophaeus
ENSCPBG00000009020	SRSF4	53	85.507	ENSMAMG00000004888	srsf4	68	88.136	Mastacembelus_armatus
ENSCPBG00000009020	SRSF4	92	80.172	ENSMGAG00000002400	SRSF4	59	88.339	Meleagris_gallopavo
ENSCPBG00000009020	SRSF4	93	78.112	ENSMAUG00000021940	Srsf4	67	85.498	Mesocricetus_auratus
ENSCPBG00000009020	SRSF4	66	89.458	ENSMICG00000043567	SRSF4	66	85.498	Microcebus_murinus
ENSCPBG00000009020	SRSF4	93	77.682	ENSMOCG00000013319	Srsf4	67	84.894	Microtus_ochrogaster
ENSCPBG00000009020	SRSF4	50	85.507	ENSMMOG00000013653	srsf4	65	80.791	Mola_mola
ENSCPBG00000009020	SRSF4	60	92.359	ENSMODG00000011052	SRSF4	89	93.728	Monodelphis_domestica
ENSCPBG00000009020	SRSF4	93	75.322	MGP_CAROLIEiJ_G0026555	Srsf4	67	88.554	Mus_caroli
ENSCPBG00000009020	SRSF4	93	77.897	ENSMUSG00000028911	Srsf4	67	88.554	Mus_musculus
ENSCPBG00000009020	SRSF4	93	76.609	MGP_PahariEiJ_G0028887	Srsf4	69	86.944	Mus_pahari
ENSCPBG00000009020	SRSF4	93	77.253	MGP_SPRETEiJ_G0027535	Srsf4	67	88.554	Mus_spretus
ENSCPBG00000009020	SRSF4	66	90.964	ENSMPUG00000015470	SRSF4	66	86.364	Mustela_putorius_furo
ENSCPBG00000009020	SRSF4	65	86.280	ENSMLUG00000014770	SRSF4	65	85.627	Myotis_lucifugus
ENSCPBG00000009020	SRSF4	92	77.802	ENSNGAG00000012225	Srsf4	70	83.824	Nannospalax_galili
ENSCPBG00000009020	SRSF4	65	91.104	ENSNLEG00000009916	SRSF4	68	84.273	Nomascus_leucogenys
ENSCPBG00000009020	SRSF4	99	77.419	ENSOPRG00000010098	SRSF4	58	92.254	Ochotona_princeps
ENSCPBG00000009020	SRSF4	66	84.084	ENSODEG00000003230	SRSF4	66	77.946	Octodon_degus
ENSCPBG00000009020	SRSF4	66	87.688	ENSOCUG00000001837	SRSF4	67	84.337	Oryctolagus_cuniculus
ENSCPBG00000009020	SRSF4	66	88.218	ENSOGAG00000015515	SRSF4	68	82.789	Otolemur_garnettii
ENSCPBG00000009020	SRSF4	65	90.491	ENSPPAG00000028357	SRSF4	68	83.680	Pan_paniscus
ENSCPBG00000009020	SRSF4	65	89.538	ENSPPRG00000016248	SRSF4	68	84.524	Panthera_pardus
ENSCPBG00000009020	SRSF4	65	90.491	ENSPTRG00000000445	SRSF4	68	83.680	Pan_troglodytes
ENSCPBG00000009020	SRSF4	65	91.104	ENSPANG00000021937	SRSF4	68	84.661	Papio_anubis
ENSCPBG00000009020	SRSF4	88	75.113	ENSPEMG00000003365	Srsf4	64	87.797	Peromyscus_maniculatus_bairdii
ENSCPBG00000009020	SRSF4	65	86.154	ENSPPYG00000001629	SRSF4	68	84.273	Pongo_abelii
ENSCPBG00000009020	SRSF4	65	87.805	ENSPCAG00000009879	SRSF4	66	84.098	Procavia_capensis
ENSCPBG00000009020	SRSF4	65	89.297	ENSPCOG00000027341	SRSF4	68	83.383	Propithecus_coquereli
ENSCPBG00000009020	SRSF4	51	78.832	ENSPVAG00000012500	SRSF4	51	73.554	Pteropus_vampyrus
ENSCPBG00000009020	SRSF4	60	92.359	ENSRNOG00000010007	Srsf4	69	86.647	Rattus_norvegicus
ENSCPBG00000009020	SRSF4	65	91.104	ENSRBIG00000035789	SRSF4	68	84.273	Rhinopithecus_bieti
ENSCPBG00000009020	SRSF4	65	91.104	ENSRROG00000029463	SRSF4	68	84.273	Rhinopithecus_roxellana
ENSCPBG00000009020	SRSF4	72	86.538	ENSSBOG00000027098	SRSF4	66	84.290	Saimiri_boliviensis_boliviensis
ENSCPBG00000009020	SRSF4	56	90.714	ENSSHAG00000012407	SRSF4	99	87.372	Sarcophilus_harrisii
ENSCPBG00000009020	SRSF4	92	78.326	ENSSPUG00000015318	-	88	84.753	Sphenodon_punctatus
ENSCPBG00000009020	SRSF4	85	81.542	ENSTGUG00000000765	SRSF4	66	80.667	Taeniopygia_guttata
ENSCPBG00000009020	SRSF4	65	90.491	ENSTTRG00000002572	SRSF4	68	83.333	Tursiops_truncatus
ENSCPBG00000009020	SRSF4	72	85.675	ENSUAMG00000006106	SRSF4	66	85.152	Ursus_americanus
ENSCPBG00000009020	SRSF4	67	84.320	ENSVVUG00000012690	SRSF4	64	81.967	Vulpes_vulpes