EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPBG00000009105 (Gene tree)
Gene ID: 101948525
Gene Symbol: RDM1
Alias: MGC33977|RAD52B
Full Name: RAD52 motif containing 1
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Minus strand
Length: 23606 bases
Position: chrKK082918.1:4646131-4669736
Accession: 19950
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000012026	RRM_1	PF00076.22	3e-05	1	1
ENSCPBP00000012023	RRM_1	PF00076.22	4.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000014354	RDM1-202	950	-	ENSCPBP00000012026	260 (aa)	-	-
ENSCPBT00000014351	RDM1-201	1040	-	ENSCPBP00000012023	290 (aa)	-	-

Gene Model

Click here to download ENSCPBG00000009105's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000009105's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000009105	RDM1	95	54.032	ENSG00000278023	RDM1	90	70.874	Homo_sapiens
ENSCPBG00000009105	RDM1	77	38.235	ENSAPOG00000021886	zgc:103564	75	38.235	Acanthochromis_polyacanthus
ENSCPBG00000009105	RDM1	90	37.131	ENSAPEG00000008929	zgc:103564	83	38.158	Amphiprion_percula
ENSCPBG00000009105	RDM1	96	72.908	ENSAPLG00000004384	RDM1	88	74.672	Anas_platyrhynchos
ENSCPBG00000009105	RDM1	93	63.158	ENSACAG00000012989	-	90	63.454	Anolis_carolinensis
ENSCPBG00000009105	RDM1	93	55.645	ENSANAG00000032752	RDM1	73	70.297	Aotus_nancymaae
ENSCPBG00000009105	RDM1	93	54.065	ENSBTAG00000000030	RDM1	78	55.605	Bos_taurus
ENSCPBG00000009105	RDM1	93	53.441	ENSCJAG00000015031	RDM1	73	69.307	Callithrix_jacchus
ENSCPBG00000009105	RDM1	86	53.304	ENSCAFG00000015160	-	91	51.489	Canis_familiaris
ENSCPBG00000009105	RDM1	93	53.659	ENSCHIG00000020607	RDM1	79	54.709	Capra_hircus
ENSCPBG00000009105	RDM1	96	51.575	ENSCPOG00000001495	-	79	53.247	Cavia_porcellus
ENSCPBG00000009105	RDM1	92	55.328	ENSCCAG00000035763	RDM1	73	69.307	Cebus_capucinus
ENSCPBG00000009105	RDM1	93	55.918	ENSCATG00000044451	RDM1	73	72.277	Cercocebus_atys
ENSCPBG00000009105	RDM1	95	55.645	ENSCSAG00000006209	RDM1	85	56.889	Chlorocebus_sabaeus
ENSCPBG00000009105	RDM1	93	55.102	ENSCANG00000041322	RDM1	87	69.903	Colobus_angolensis_palliatus
ENSCPBG00000009105	RDM1	92	54.545	ENSCGRG00001015927	Rdm1	78	55.157	Cricetulus_griseus_chok1gshd
ENSCPBG00000009105	RDM1	85	36.161	ENSCVAG00000001956	zgc:103564	82	34.783	Cyprinodon_variegatus
ENSCPBG00000009105	RDM1	95	56.000	ENSDNOG00000045224	-	84	57.709	Dasypus_novemcinctus
ENSCPBG00000009105	RDM1	73	55.330	ENSEASG00005010554	RDM1	73	53.171	Equus_asinus_asinus
ENSCPBG00000009105	RDM1	95	52.778	ENSECAG00000022182	RDM1	80	53.982	Equus_caballus
ENSCPBG00000009105	RDM1	95	52.000	ENSEEUG00000006127	RDM1	88	53.571	Erinaceus_europaeus
ENSCPBG00000009105	RDM1	74	54.822	ENSFCAG00000043429	RDM1	94	54.229	Felis_catus
ENSCPBG00000009105	RDM1	96	71.486	ENSGALG00000000243	RDM1	81	73.568	Gallus_gallus
ENSCPBG00000009105	RDM1	97	96.443	ENSGAGG00000000293	-	86	91.852	Gopherus_agassizii
ENSCPBG00000009105	RDM1	93	55.102	ENSGGOG00000010584	RDM1	73	72.277	Gorilla_gorilla
ENSCPBG00000009105	RDM1	91	36.820	ENSHCOG00000002518	-	78	37.615	Hippocampus_comes
ENSCPBG00000009105	RDM1	93	53.061	ENSSTOG00000022491	RDM1	78	54.260	Ictidomys_tridecemlineatus
ENSCPBG00000009105	RDM1	86	55.459	ENSLAFG00000029300	RDM1	80	55.459	Loxodonta_africana
ENSCPBG00000009105	RDM1	93	55.918	ENSMFAG00000032968	RDM1	73	72.277	Macaca_fascicularis
ENSCPBG00000009105	RDM1	93	55.918	ENSMMUG00000006847	RDM1	87	70.874	Macaca_mulatta
ENSCPBG00000009105	RDM1	93	55.918	ENSMNEG00000039977	RDM1	73	72.277	Macaca_nemestrina
ENSCPBG00000009105	RDM1	93	55.510	ENSMLEG00000041158	RDM1	87	70.874	Mandrillus_leucophaeus
ENSCPBG00000009105	RDM1	93	70.370	ENSMGAG00000008774	RDM1	88	72.851	Meleagris_gallopavo
ENSCPBG00000009105	RDM1	93	55.285	ENSMAUG00000018559	Rdm1	77	56.757	Mesocricetus_auratus
ENSCPBG00000009105	RDM1	96	55.159	ENSMICG00000038651	RDM1	85	56.828	Microcebus_murinus
ENSCPBG00000009105	RDM1	92	53.909	ENSMOCG00000015095	Rdm1	83	53.478	Microtus_ochrogaster
ENSCPBG00000009105	RDM1	93	54.286	ENSMODG00000011101	RDM1	80	55.157	Monodelphis_domestica
ENSCPBG00000009105	RDM1	97	50.196	MGP_CAROLIEiJ_G0017226	Rdm1	80	51.528	Mus_caroli
ENSCPBG00000009105	RDM1	97	50.588	ENSMUSG00000010362	Rdm1	80	51.965	Mus_musculus
ENSCPBG00000009105	RDM1	97	48.627	MGP_PahariEiJ_G0018356	Rdm1	80	49.782	Mus_pahari
ENSCPBG00000009105	RDM1	97	49.804	MGP_SPRETEiJ_G0018069	Rdm1	80	51.528	Mus_spretus
ENSCPBG00000009105	RDM1	93	53.846	ENSMPUG00000008363	RDM1	78	55.111	Mustela_putorius_furo
ENSCPBG00000009105	RDM1	93	54.694	ENSNLEG00000014173	RDM1	89	69.903	Nomascus_leucogenys
ENSCPBG00000009105	RDM1	84	55.708	ENSMEUG00000015826	RDM1	87	55.708	Notamacropus_eugenii
ENSCPBG00000009105	RDM1	84	55.405	ENSOCUG00000022704	RDM1	89	53.879	Oryctolagus_cuniculus
ENSCPBG00000009105	RDM1	93	54.694	ENSOGAG00000011332	RDM1	78	55.856	Otolemur_garnettii
ENSCPBG00000009105	RDM1	93	55.918	ENSPPAG00000029969	RDM1	78	57.658	Pan_paniscus
ENSCPBG00000009105	RDM1	93	55.510	ENSPTRG00000009031	RDM1	73	73.267	Pan_troglodytes
ENSCPBG00000009105	RDM1	93	55.510	ENSPANG00000022933	RDM1	73	71.287	Papio_anubis
ENSCPBG00000009105	RDM1	92	53.719	ENSPEMG00000018985	Rdm1	78	54.709	Peromyscus_maniculatus_bairdii
ENSCPBG00000009105	RDM1	93	54.694	ENSPPYG00000008198	RDM1	78	56.306	Pongo_abelii
ENSCPBG00000009105	RDM1	96	53.571	ENSPCOG00000017995	RDM1	77	65.421	Propithecus_coquereli
ENSCPBG00000009105	RDM1	84	54.545	ENSPVAG00000001116	RDM1	88	54.751	Pteropus_vampyrus
ENSCPBG00000009105	RDM1	97	50.980	ENSRNOG00000020751	Rdm1	79	52.632	Rattus_norvegicus
ENSCPBG00000009105	RDM1	93	55.918	ENSRBIG00000030000	RDM1	73	72.277	Rhinopithecus_bieti
ENSCPBG00000009105	RDM1	93	55.918	ENSRROG00000035242	RDM1	87	70.874	Rhinopithecus_roxellana
ENSCPBG00000009105	RDM1	93	58.607	ENSSHAG00000013584	RDM1	88	57.787	Sarcophilus_harrisii
ENSCPBG00000009105	RDM1	88	75.546	ENSSPUG00000010941	RDM1	88	72.269	Sphenodon_punctatus
ENSCPBG00000009105	RDM1	91	38.017	ENSSPAG00000011690	-	82	39.394	Stegastes_partitus
ENSCPBG00000009105	RDM1	91	45.378	ENSSSCG00000017574	-	85	48.276	Sus_scrofa
ENSCPBG00000009105	RDM1	93	44.490	ENSTBEG00000010030	RDM1	87	44.344	Tupaia_belangeri
ENSCPBG00000009105	RDM1	93	55.102	ENSUAMG00000027279	RDM1	78	56.502	Ursus_americanus
ENSCPBG00000009105	RDM1	93	55.102	ENSUMAG00000015423	RDM1	77	56.502	Ursus_maritimus