EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000009288 (Gene tree)
Gene ID: 101950840
Gene Symbol: PUM1
Alias: KIAA0099|PUMH1
Full Name: pumilio RNA binding family member 1
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Minus strand
Length: 123390 bases
Position: chrKK082935.1:3806923-3930312
Accession: 14957
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000021454	PUF	PF00806.19	4.1e-73	1	8
ENSCPBP00000021454	PUF	PF00806.19	4.1e-73	2	8
ENSCPBP00000021454	PUF	PF00806.19	4.1e-73	3	8
ENSCPBP00000021454	PUF	PF00806.19	4.1e-73	4	8
ENSCPBP00000021454	PUF	PF00806.19	4.1e-73	5	8
ENSCPBP00000021454	PUF	PF00806.19	4.1e-73	6	8
ENSCPBP00000021454	PUF	PF00806.19	4.1e-73	7	8
ENSCPBP00000021454	PUF	PF00806.19	4.1e-73	8	8
ENSCPBP00000021448	PUF	PF00806.19	1.7e-72	1	8
ENSCPBP00000021448	PUF	PF00806.19	1.7e-72	2	8
ENSCPBP00000021448	PUF	PF00806.19	1.7e-72	3	8
ENSCPBP00000021448	PUF	PF00806.19	1.7e-72	4	8
ENSCPBP00000021448	PUF	PF00806.19	1.7e-72	5	8
ENSCPBP00000021448	PUF	PF00806.19	1.7e-72	6	8
ENSCPBP00000021448	PUF	PF00806.19	1.7e-72	7	8
ENSCPBP00000021448	PUF	PF00806.19	1.7e-72	8	8
ENSCPBP00000021578	PUF	PF00806.19	2.9e-72	1	8
ENSCPBP00000021578	PUF	PF00806.19	2.9e-72	2	8
ENSCPBP00000021578	PUF	PF00806.19	2.9e-72	3	8
ENSCPBP00000021578	PUF	PF00806.19	2.9e-72	4	8
ENSCPBP00000021578	PUF	PF00806.19	2.9e-72	5	8
ENSCPBP00000021578	PUF	PF00806.19	2.9e-72	6	8
ENSCPBP00000021578	PUF	PF00806.19	2.9e-72	7	8
ENSCPBP00000021578	PUF	PF00806.19	2.9e-72	8	8
ENSCPBP00000021451	PUF	PF00806.19	3.9e-72	1	8
ENSCPBP00000021451	PUF	PF00806.19	3.9e-72	2	8
ENSCPBP00000021451	PUF	PF00806.19	3.9e-72	3	8
ENSCPBP00000021451	PUF	PF00806.19	3.9e-72	4	8
ENSCPBP00000021451	PUF	PF00806.19	3.9e-72	5	8
ENSCPBP00000021451	PUF	PF00806.19	3.9e-72	6	8
ENSCPBP00000021451	PUF	PF00806.19	3.9e-72	7	8
ENSCPBP00000021451	PUF	PF00806.19	3.9e-72	8	8
ENSCPBP00000021077	PUF	PF00806.19	9.3e-72	1	8
ENSCPBP00000021077	PUF	PF00806.19	9.3e-72	2	8
ENSCPBP00000021077	PUF	PF00806.19	9.3e-72	3	8
ENSCPBP00000021077	PUF	PF00806.19	9.3e-72	4	8
ENSCPBP00000021077	PUF	PF00806.19	9.3e-72	5	8
ENSCPBP00000021077	PUF	PF00806.19	9.3e-72	6	8
ENSCPBP00000021077	PUF	PF00806.19	9.3e-72	7	8
ENSCPBP00000021077	PUF	PF00806.19	9.3e-72	8	8

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000024810	PUM1-201	3609	-	ENSCPBP00000021077	1202 (aa)	-	-
ENSCPBT00000025410	PUM1-205	3177	-	ENSCPBP00000021578	1058 (aa)	-	-
ENSCPBT00000025522	PUM1-206	1973	-	ENSCPBP00000021670	540 (aa)	-	-
ENSCPBT00000025253	PUM1-203	3279	-	ENSCPBP00000021451	1092 (aa)	-	-
ENSCPBT00000025249	PUM1-202	3327	-	ENSCPBP00000021448	1108 (aa)	-	-
ENSCPBT00000025256	PUM1-204	2835	-	ENSCPBP00000021454	944 (aa)	-	-

Gene Model

Click here to download ENSCPBG00000009288's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000009288's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000009288	PUM1	89	88.808	ENSCPBG00000019966	PUM2	100	88.889

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000009288	PUM1	100	98.544	ENSG00000134644	PUM1	100	97.881	Homo_sapiens
ENSCPBG00000009288	PUM1	99	91.807	ENSAPOG00000021632	pum1	100	91.807	Acanthochromis_polyacanthus
ENSCPBG00000009288	PUM1	100	98.309	ENSAMEG00000017656	PUM1	98	97.005	Ailuropoda_melanoleuca
ENSCPBG00000009288	PUM1	100	81.683	ENSACIG00000021013	pum1	93	91.566	Amphilophus_citrinellus
ENSCPBG00000009288	PUM1	99	91.807	ENSAOCG00000003944	pum1	100	91.807	Amphiprion_ocellaris
ENSCPBG00000009288	PUM1	99	91.807	ENSAPEG00000014550	pum1	100	91.807	Amphiprion_percula
ENSCPBG00000009288	PUM1	100	91.807	ENSATEG00000016004	pum1	100	91.807	Anabas_testudineus
ENSCPBG00000009288	PUM1	100	99.034	ENSAPLG00000009351	PUM1	100	98.486	Anas_platyrhynchos
ENSCPBG00000009288	PUM1	100	99.275	ENSACAG00000000682	PUM1	98	96.641	Anolis_carolinensis
ENSCPBG00000009288	PUM1	100	98.301	ENSANAG00000027865	PUM1	100	97.826	Aotus_nancymaae
ENSCPBG00000009288	PUM1	99	75.603	ENSACLG00000019354	pum1	100	79.001	Astatotilapia_calliptera
ENSCPBG00000009288	PUM1	100	85.236	ENSAMXG00000020607	pum1	92	93.478	Astyanax_mexicanus
ENSCPBG00000009288	PUM1	100	98.786	ENSBTAG00000018979	PUM1	100	98.792	Bos_taurus
ENSCPBG00000009288	PUM1	100	98.068	ENSCJAG00000006035	PUM1	100	98.068	Callithrix_jacchus
ENSCPBG00000009288	PUM1	100	98.309	ENSCAFG00000011205	PUM1	100	95.458	Canis_familiaris
ENSCPBG00000009288	PUM1	99	97.617	ENSCAFG00020024616	PUM1	99	97.617	Canis_lupus_dingo
ENSCPBG00000009288	PUM1	100	98.786	ENSCHIG00000012952	PUM1	100	98.309	Capra_hircus
ENSCPBG00000009288	PUM1	100	98.068	ENSTSYG00000008868	PUM1	100	97.564	Carlito_syrichta
ENSCPBG00000009288	PUM1	100	97.585	ENSCPOG00000031613	PUM1	100	97.564	Cavia_porcellus
ENSCPBG00000009288	PUM1	100	98.068	ENSCATG00000017991	PUM1	100	98.551	Cercocebus_atys
ENSCPBG00000009288	PUM1	100	97.585	ENSCLAG00000007662	PUM1	100	97.585	Chinchilla_lanigera
ENSCPBG00000009288	PUM1	100	98.068	ENSCSAG00000001028	PUM1	100	96.750	Chlorocebus_sabaeus
ENSCPBG00000009288	PUM1	99	94.109	ENSCHOG00000010245	PUM1	93	94.126	Choloepus_hoffmanni
ENSCPBG00000009288	PUM1	100	98.068	ENSCANG00000042606	PUM1	100	98.068	Colobus_angolensis_palliatus
ENSCPBG00000009288	PUM1	100	97.573	ENSCGRG00001024949	Pum1	100	97.070	Cricetulus_griseus_chok1gshd
ENSCPBG00000009288	PUM1	100	97.573	ENSCGRG00000014197	Pum1	100	97.070	Cricetulus_griseus_crigri
ENSCPBG00000009288	PUM1	99	75.743	ENSCSEG00000015981	pum1	100	78.466	Cynoglossus_semilaevis
ENSCPBG00000009288	PUM1	100	81.188	ENSCVAG00000007043	pum1	100	76.033	Cyprinodon_variegatus
ENSCPBG00000009288	PUM1	100	85.112	ENSDARG00000099256	pum1	95	94.408	Danio_rerio
ENSCPBG00000009288	PUM1	100	97.826	ENSDNOG00000010939	PUM1	100	97.225	Dasypus_novemcinctus
ENSCPBG00000009288	PUM1	94	97.585	ENSDORG00000001875	Pum1	100	97.585	Dipodomys_ordii
ENSCPBG00000009288	PUM1	97	90.998	ENSETEG00000004355	PUM1	87	92.871	Echinops_telfairi
ENSCPBG00000009288	PUM1	100	98.068	ENSEASG00005010813	PUM1	100	97.475	Equus_asinus_asinus
ENSCPBG00000009288	PUM1	100	98.068	ENSECAG00000021369	PUM1	100	97.309	Equus_caballus
ENSCPBG00000009288	PUM1	80	98.667	ENSEEUG00000003871	PUM1	75	99.111	Erinaceus_europaeus
ENSCPBG00000009288	PUM1	100	93.237	ENSELUG00000002409	pum1	95	93.237	Esox_lucius
ENSCPBG00000009288	PUM1	100	98.309	ENSFCAG00000010374	PUM1	100	98.792	Felis_catus
ENSCPBG00000009288	PUM1	100	99.275	ENSFALG00000001214	PUM1	98	96.747	Ficedula_albicollis
ENSCPBG00000009288	PUM1	100	97.567	ENSFDAG00000011319	PUM1	100	97.458	Fukomys_damarensis
ENSCPBG00000009288	PUM1	91	91.325	ENSGMOG00000010491	pum1	94	91.325	Gadus_morhua
ENSCPBG00000009288	PUM1	100	99.275	ENSGALG00000042598	PUM1	100	98.811	Gallus_gallus
ENSCPBG00000009288	PUM1	99	88.276	ENSGAFG00000015617	pum1	100	91.325	Gambusia_affinis
ENSCPBG00000009288	PUM1	100	81.281	ENSGACG00000005717	pum1	100	76.461	Gasterosteus_aculeatus
ENSCPBG00000009288	PUM1	100	99.517	ENSGAGG00000001290	PUM1	100	99.327	Gopherus_agassizii
ENSCPBG00000009288	PUM1	100	98.068	ENSGGOG00000011983	PUM1	100	98.068	Gorilla_gorilla
ENSCPBG00000009288	PUM1	100	81.312	ENSHBUG00000018718	pum1	100	76.529	Haplochromis_burtoni
ENSCPBG00000009288	PUM1	100	97.324	ENSHGLG00000013819	Pum1	100	97.272	Heterocephalus_glaber_female
ENSCPBG00000009288	PUM1	100	97.324	ENSHGLG00100008621	Pum1	100	97.272	Heterocephalus_glaber_male
ENSCPBG00000009288	PUM1	99	74.373	ENSHCOG00000005149	pum1	100	75.185	Hippocampus_comes
ENSCPBG00000009288	PUM1	100	92.754	ENSIPUG00000020421	pum1	93	92.754	Ictalurus_punctatus
ENSCPBG00000009288	PUM1	100	97.669	ENSSTOG00000010757	PUM1	100	97.669	Ictidomys_tridecemlineatus
ENSCPBG00000009288	PUM1	100	97.343	ENSJJAG00000000530	Pum1	100	97.161	Jaculus_jaculus
ENSCPBG00000009288	PUM1	100	80.817	ENSKMAG00000003481	pum1	100	76.266	Kryptolebias_marmoratus
ENSCPBG00000009288	PUM1	100	91.807	ENSLBEG00000002527	pum1	94	91.807	Labrus_bergylta
ENSCPBG00000009288	PUM1	100	89.343	ENSLACG00000017188	PUM1	99	87.231	Latimeria_chalumnae
ENSCPBG00000009288	PUM1	100	97.101	ENSLOCG00000005210	pum1	95	97.101	Lepisosteus_oculatus
ENSCPBG00000009288	PUM1	100	97.826	ENSLAFG00000003178	PUM1	100	97.225	Loxodonta_africana
ENSCPBG00000009288	PUM1	100	98.068	ENSMFAG00000010291	PUM1	100	98.551	Macaca_fascicularis
ENSCPBG00000009288	PUM1	100	98.068	ENSMMUG00000013520	PUM1	100	98.068	Macaca_mulatta
ENSCPBG00000009288	PUM1	100	98.068	ENSMNEG00000034639	PUM1	100	98.068	Macaca_nemestrina
ENSCPBG00000009288	PUM1	100	98.068	ENSMLEG00000038743	PUM1	100	98.068	Mandrillus_leucophaeus
ENSCPBG00000009288	PUM1	98	91.857	ENSMAMG00000011606	pum1	94	91.807	Mastacembelus_armatus
ENSCPBG00000009288	PUM1	100	81.312	ENSMZEG00005005834	pum1	100	76.529	Maylandia_zebra
ENSCPBG00000009288	PUM1	100	99.275	ENSMGAG00000000724	PUM1	100	98.536	Meleagris_gallopavo
ENSCPBG00000009288	PUM1	100	97.585	ENSMAUG00000022090	Pum1	100	97.161	Mesocricetus_auratus
ENSCPBG00000009288	PUM1	100	94.946	ENSMICG00000012213	-	100	94.946	Microcebus_murinus
ENSCPBG00000009288	PUM1	100	98.309	ENSMICG00000007713	-	100	98.309	Microcebus_murinus
ENSCPBG00000009288	PUM1	100	97.343	ENSMOCG00000015463	Pum1	100	96.978	Microtus_ochrogaster
ENSCPBG00000009288	PUM1	99	88.506	ENSMMOG00000019817	pum1	100	91.566	Mola_mola
ENSCPBG00000009288	PUM1	100	98.551	ENSMODG00000017067	PUM1	100	98.151	Monodelphis_domestica
ENSCPBG00000009288	PUM1	99	88.736	ENSMALG00000016399	pum1	100	91.807	Monopterus_albus
ENSCPBG00000009288	PUM1	100	98.301	MGP_CAROLIEiJ_G0026549	Pum1	100	96.928	Mus_caroli
ENSCPBG00000009288	PUM1	100	98.058	ENSMUSG00000028580	Pum1	100	96.978	Mus_musculus
ENSCPBG00000009288	PUM1	100	98.058	MGP_PahariEiJ_G0028881	Pum1	100	96.928	Mus_pahari
ENSCPBG00000009288	PUM1	100	98.058	MGP_SPRETEiJ_G0027529	Pum1	100	96.928	Mus_spretus
ENSCPBG00000009288	PUM1	100	98.309	ENSMPUG00000015454	PUM1	100	97.727	Mustela_putorius_furo
ENSCPBG00000009288	PUM1	100	97.631	ENSMLUG00000006490	PUM1	100	97.225	Myotis_lucifugus
ENSCPBG00000009288	PUM1	100	97.634	ENSNGAG00000002378	Pum1	100	97.634	Nannospalax_galili
ENSCPBG00000009288	PUM1	100	78.759	ENSNBRG00000010689	pum1	100	83.086	Neolamprologus_brichardi
ENSCPBG00000009288	PUM1	100	96.528	ENSNLEG00000001151	PUM1	100	96.528	Nomascus_leucogenys
ENSCPBG00000009288	PUM1	80	100.000	ENSMEUG00000000976	-	75	100.000	Notamacropus_eugenii
ENSCPBG00000009288	PUM1	83	98.131	ENSOPRG00000001776	PUM1	73	98.131	Ochotona_princeps
ENSCPBG00000009288	PUM1	100	97.585	ENSODEG00000003465	PUM1	100	97.385	Octodon_degus
ENSCPBG00000009288	PUM1	100	81.863	ENSONIG00000002290	pum1	93	91.566	Oreochromis_niloticus
ENSCPBG00000009288	PUM1	91	76.609	ENSOANG00000004902	-	100	75.792	Ornithorhynchus_anatinus
ENSCPBG00000009288	PUM1	100	97.573	ENSOCUG00000008641	PUM1	99	96.972	Oryctolagus_cuniculus
ENSCPBG00000009288	PUM1	100	82.426	ENSORLG00000011482	pum1	100	76.359	Oryzias_latipes
ENSCPBG00000009288	PUM1	100	82.550	ENSORLG00020019461	pum1	100	76.359	Oryzias_latipes_hni
ENSCPBG00000009288	PUM1	100	82.550	ENSORLG00015011375	pum1	100	76.442	Oryzias_latipes_hsok
ENSCPBG00000009288	PUM1	98	93.494	ENSOMEG00000009312	pum1	98	91.566	Oryzias_melastigma
ENSCPBG00000009288	PUM1	100	95.833	ENSOGAG00000011063	PUM1	100	94.626	Otolemur_garnettii
ENSCPBG00000009288	PUM1	100	98.309	ENSOARG00000001899	PUM1	100	98.309	Ovis_aries
ENSCPBG00000009288	PUM1	100	98.068	ENSPPAG00000044003	PUM1	100	98.068	Pan_paniscus
ENSCPBG00000009288	PUM1	100	98.309	ENSPPRG00000001370	PUM1	100	97.987	Panthera_pardus
ENSCPBG00000009288	PUM1	100	98.309	ENSPTIG00000010798	PUM1	100	97.775	Panthera_tigris_altaica
ENSCPBG00000009288	PUM1	100	98.068	ENSPTRG00000000453	PUM1	100	98.068	Pan_troglodytes
ENSCPBG00000009288	PUM1	100	98.068	ENSPANG00000016338	PUM1	100	98.551	Papio_anubis
ENSCPBG00000009288	PUM1	95	93.961	ENSPKIG00000010578	pum1	93	93.961	Paramormyrops_kingsleyae
ENSCPBG00000009288	PUM1	100	99.517	ENSPSIG00000014118	PUM1	100	99.495	Pelodiscus_sinensis
ENSCPBG00000009288	PUM1	100	77.211	ENSPMGG00000005836	pum1	90	92.494	Periophthalmus_magnuspinnatus
ENSCPBG00000009288	PUM1	100	97.585	ENSPEMG00000010009	Pum1	100	97.161	Peromyscus_maniculatus_bairdii
ENSCPBG00000009288	PUM1	100	98.551	ENSPCIG00000014151	PUM1	100	99.034	Phascolarctos_cinereus
ENSCPBG00000009288	PUM1	94	91.325	ENSPFOG00000007289	pum1	93	91.325	Poecilia_formosa
ENSCPBG00000009288	PUM1	100	91.325	ENSPLAG00000007256	pum1	94	91.325	Poecilia_latipinna
ENSCPBG00000009288	PUM1	99	76.226	ENSPMEG00000019543	pum1	99	78.289	Poecilia_mexicana
ENSCPBG00000009288	PUM1	100	81.312	ENSPREG00000005195	pum1	100	80.727	Poecilia_reticulata
ENSCPBG00000009288	PUM1	100	98.068	ENSPPYG00000001621	PUM1	100	95.792	Pongo_abelii
ENSCPBG00000009288	PUM1	84	98.765	ENSPCAG00000001979	PUM1	75	98.765	Procavia_capensis
ENSCPBG00000009288	PUM1	100	98.309	ENSPCOG00000004398	PUM1	100	98.309	Propithecus_coquereli
ENSCPBG00000009288	PUM1	100	96.528	ENSPVAG00000005207	PUM1	97	95.550	Pteropus_vampyrus
ENSCPBG00000009288	PUM1	100	81.312	ENSPNYG00000009518	pum1	100	82.169	Pundamilia_nyererei
ENSCPBG00000009288	PUM1	100	85.484	ENSPNAG00000026728	pum1	95	93.720	Pygocentrus_nattereri
ENSCPBG00000009288	PUM1	100	98.058	ENSRNOG00000011709	Pum1	100	96.801	Rattus_norvegicus
ENSCPBG00000009288	PUM1	100	98.068	ENSRBIG00000042521	PUM1	100	98.551	Rhinopithecus_bieti
ENSCPBG00000009288	PUM1	100	98.544	ENSRROG00000020156	PUM1	100	98.068	Rhinopithecus_roxellana
ENSCPBG00000009288	PUM1	100	98.068	ENSSBOG00000032037	PUM1	100	98.068	Saimiri_boliviensis_boliviensis
ENSCPBG00000009288	PUM1	100	98.551	ENSSHAG00000010918	PUM1	100	98.067	Sarcophilus_harrisii
ENSCPBG00000009288	PUM1	99	88.736	ENSSMAG00000010918	pum1	100	91.807	Scophthalmus_maximus
ENSCPBG00000009288	PUM1	100	91.807	ENSSDUG00000009021	pum1	94	91.807	Seriola_dumerili
ENSCPBG00000009288	PUM1	100	81.436	ENSSLDG00000009667	pum1	93	91.807	Seriola_lalandi_dorsalis
ENSCPBG00000009288	PUM1	99	97.727	ENSSARG00000003055	PUM1	92	96.973	Sorex_araneus
ENSCPBG00000009288	PUM1	100	99.275	ENSSPUG00000006267	PUM1	100	98.148	Sphenodon_punctatus
ENSCPBG00000009288	PUM1	99	91.807	ENSSPAG00000016636	pum1	100	91.807	Stegastes_partitus
ENSCPBG00000009288	PUM1	100	98.786	ENSSSCG00000003591	PUM1	100	98.792	Sus_scrofa
ENSCPBG00000009288	PUM1	100	81.312	ENSTRUG00000013121	pum1	100	82.716	Takifugu_rubripes
ENSCPBG00000009288	PUM1	100	81.088	ENSTNIG00000016983	pum1	99	76.802	Tetraodon_nigroviridis
ENSCPBG00000009288	PUM1	86	94.540	ENSTBEG00000013810	PUM1	89	93.902	Tupaia_belangeri
ENSCPBG00000009288	PUM1	99	95.962	ENSTTRG00000007436	PUM1	90	97.901	Tursiops_truncatus
ENSCPBG00000009288	PUM1	99	97.727	ENSUAMG00000018262	-	100	97.232	Ursus_americanus
ENSCPBG00000009288	PUM1	100	97.477	ENSUMAG00000009211	PUM1	100	98.792	Ursus_maritimus
ENSCPBG00000009288	PUM1	100	98.007	ENSVPAG00000005902	PUM1	92	98.381	Vicugna_pacos
ENSCPBG00000009288	PUM1	100	98.786	ENSVVUG00000014631	PUM1	100	98.792	Vulpes_vulpes
ENSCPBG00000009288	PUM1	100	89.614	ENSXETG00000012904	pum1	99	88.442	Xenopus_tropicalis
ENSCPBG00000009288	PUM1	100	81.436	ENSXMAG00000002945	pum1	100	78.135	Xiphophorus_maculatus