EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPBG00000009366 (Gene tree)
Gene ID: 101936881
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Minus strand
Length: 18857 bases
Position: chrKK083019.1:2636571-2655427
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000012413	RRM_5	PF13893.6	1.9e-06	1	1
ENSCPBP00000012413	RRM_1	PF00076.22	4.4e-18	1	1
ENSCPBP00000012415	RRM_1	PF00076.22	1.2e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000014786	-	1633	-	ENSCPBP00000012413	185 (aa)	XP_023964834	UPI000CE63956
ENSCPBT00000014788	-	1114	-	ENSCPBP00000012415	324 (aa)	XP_005291452	UPI0003890BF0

Gene Model

Click here to download ENSCPBG00000009366's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000009366's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000009366	-	90	68.862	ENSG00000076053	RBM7	100	70.886	Homo_sapiens
ENSCPBG00000009366	-	81	53.333	ENSAPOG00000012768	rbm7	60	52.381	Acanthochromis_polyacanthus
ENSCPBG00000009366	-	100	57.846	ENSAMEG00000013276	-	100	57.846	Ailuropoda_melanoleuca
ENSCPBG00000009366	-	81	53.333	ENSAOCG00000004178	rbm7	55	54.777	Amphiprion_ocellaris
ENSCPBG00000009366	-	81	53.333	ENSAPEG00000021981	rbm7	55	54.777	Amphiprion_percula
ENSCPBG00000009366	-	73	75.735	ENSAPLG00000005180	-	100	68.619	Anas_platyrhynchos
ENSCPBG00000009366	-	84	64.968	ENSACAG00000011589	-	90	53.175	Anolis_carolinensis
ENSCPBG00000009366	-	84	71.154	ENSANAG00000031879	-	94	71.795	Aotus_nancymaae
ENSCPBG00000009366	-	84	69.872	ENSANAG00000031340	-	100	70.303	Aotus_nancymaae
ENSCPBG00000009366	-	90	47.590	ENSACLG00000001203	rbm7	58	47.590	Astatotilapia_calliptera
ENSCPBG00000009366	-	56	47.619	ENSAMXG00000032439	rbm11	53	45.946	Astyanax_mexicanus
ENSCPBG00000009366	-	82	61.184	ENSAMXG00000037251	rbm7	59	58.750	Astyanax_mexicanus
ENSCPBG00000009366	-	100	55.077	ENSBTAG00000008219	RBM7	100	56.308	Bos_taurus
ENSCPBG00000009366	-	90	68.862	ENSCJAG00000011949	-	98	72.785	Callithrix_jacchus
ENSCPBG00000009366	-	84	71.795	ENSCAFG00000013514	-	100	56.308	Canis_familiaris
ENSCPBG00000009366	-	88	70.552	ENSCAFG00020002518	-	100	70.552	Canis_lupus_dingo
ENSCPBG00000009366	-	100	56.615	ENSCHIG00000010879	-	100	56.615	Capra_hircus
ENSCPBG00000009366	-	100	56.615	ENSCHIG00000008632	-	100	56.615	Capra_hircus
ENSCPBG00000009366	-	84	71.154	ENSTSYG00000013731	-	100	55.077	Carlito_syrichta
ENSCPBG00000009366	-	90	52.560	ENSCAPG00000012045	-	100	52.560	Cavia_aperea
ENSCPBG00000009366	-	92	52.174	ENSCPOG00000034273	-	100	52.174	Cavia_porcellus
ENSCPBG00000009366	-	100	54.769	ENSCCAG00000036534	-	100	56.923	Cebus_capucinus
ENSCPBG00000009366	-	90	70.060	ENSCATG00000037361	-	100	57.846	Cercocebus_atys
ENSCPBG00000009366	-	100	56.615	ENSCLAG00000014875	-	100	56.615	Chinchilla_lanigera
ENSCPBG00000009366	-	100	56.615	ENSCSAG00000002756	-	100	58.769	Chlorocebus_sabaeus
ENSCPBG00000009366	-	54	59.596	ENSCHOG00000007826	RBM11	50	56.075	Choloepus_hoffmanni
ENSCPBG00000009366	-	84	72.611	ENSCHOG00000012747	-	100	72.611	Choloepus_hoffmanni
ENSCPBG00000009366	-	90	69.461	ENSCANG00000031398	-	100	57.538	Colobus_angolensis_palliatus
ENSCPBG00000009366	-	84	71.795	ENSCGRG00001019236	Rbm7	100	55.692	Cricetulus_griseus_chok1gshd
ENSCPBG00000009366	-	84	71.795	ENSCGRG00000005045	Rbm7	100	55.692	Cricetulus_griseus_crigri
ENSCPBG00000009366	-	62	59.649	ENSCSEG00000002160	rbm7	53	50.000	Cynoglossus_semilaevis
ENSCPBG00000009366	-	81	52.667	ENSCVAG00000023415	rbm7	55	51.923	Cyprinodon_variegatus
ENSCPBG00000009366	-	82	57.237	ENSDARG00000020841	rbm7	60	55.625	Danio_rerio
ENSCPBG00000009366	-	65	40.876	ENSDARG00000090202	rbm11	73	40.876	Danio_rerio
ENSCPBG00000009366	-	100	57.231	ENSDNOG00000018423	-	100	57.538	Dasypus_novemcinctus
ENSCPBG00000009366	-	84	72.436	ENSDORG00000029149	Rbm7	100	55.077	Dipodomys_ordii
ENSCPBG00000009366	-	58	55.140	ENSDORG00000000801	Rbm11	75	55.140	Dipodomys_ordii
ENSCPBG00000009366	-	84	71.154	ENSETEG00000015869	-	100	53.988	Echinops_telfairi
ENSCPBG00000009366	-	50	64.130	ENSEBUG00000009746	rbm7	61	64.130	Eptatretus_burgeri
ENSCPBG00000009366	-	84	72.436	ENSEASG00005006676	-	100	56.308	Equus_asinus_asinus
ENSCPBG00000009366	-	84	73.718	ENSECAG00000004636	-	100	56.923	Equus_caballus
ENSCPBG00000009366	-	84	69.872	ENSEEUG00000015854	-	87	59.259	Erinaceus_europaeus
ENSCPBG00000009366	-	83	61.039	ENSELUG00000017868	rbm7	71	54.737	Esox_lucius
ENSCPBG00000009366	-	100	55.077	ENSFCAG00000040484	-	100	56.308	Felis_catus
ENSCPBG00000009366	-	73	74.074	ENSFALG00000010039	-	88	50.926	Ficedula_albicollis
ENSCPBG00000009366	-	100	53.538	ENSFDAG00000010616	-	100	53.538	Fukomys_damarensis
ENSCPBG00000009366	-	81	48.667	ENSGMOG00000013362	rbm7	86	39.844	Gadus_morhua
ENSCPBG00000009366	-	89	70.482	ENSGALG00000007017	RBM7	100	57.362	Gallus_gallus
ENSCPBG00000009366	-	81	54.000	ENSGAFG00000000870	rbm7	54	53.205	Gambusia_affinis
ENSCPBG00000009366	-	88	50.000	ENSGACG00000006628	rbm7	57	54.717	Gasterosteus_aculeatus
ENSCPBG00000009366	-	100	91.358	ENSGAGG00000021127	-	100	91.667	Gopherus_agassizii
ENSCPBG00000009366	-	90	68.862	ENSGGOG00000009941	-	64	88.372	Gorilla_gorilla
ENSCPBG00000009366	-	90	48.193	ENSHBUG00000004319	rbm7	58	48.193	Haplochromis_burtoni
ENSCPBG00000009366	-	99	51.084	ENSHGLG00000014428	-	98	51.084	Heterocephalus_glaber_female
ENSCPBG00000009366	-	97	53.185	ENSHGLG00000016655	-	98	52.698	Heterocephalus_glaber_female
ENSCPBG00000009366	-	100	47.706	ENSHGLG00000002486	-	95	48.012	Heterocephalus_glaber_female
ENSCPBG00000009366	-	84	57.051	ENSHGLG00000013918	-	98	58.228	Heterocephalus_glaber_female
ENSCPBG00000009366	-	84	73.077	ENSHGLG00000018700	RBM7	100	56.615	Heterocephalus_glaber_female
ENSCPBG00000009366	-	100	47.706	ENSHGLG00100011792	-	95	48.012	Heterocephalus_glaber_male
ENSCPBG00000009366	-	97	53.185	ENSHGLG00100009317	-	98	52.698	Heterocephalus_glaber_male
ENSCPBG00000009366	-	84	72.436	ENSHGLG00100005358	-	100	56.308	Heterocephalus_glaber_male
ENSCPBG00000009366	-	99	51.084	ENSHGLG00100011703	-	98	51.084	Heterocephalus_glaber_male
ENSCPBG00000009366	-	60	72.973	ENSHGLG00100005739	-	87	48.117	Heterocephalus_glaber_male
ENSCPBG00000009366	-	84	57.051	ENSHGLG00100015249	-	98	58.228	Heterocephalus_glaber_male
ENSCPBG00000009366	-	82	59.211	ENSIPUG00000009397	rbm7	90	47.059	Ictalurus_punctatus
ENSCPBG00000009366	-	100	53.846	ENSSTOG00000012459	-	100	53.846	Ictidomys_tridecemlineatus
ENSCPBG00000009366	-	79	68.493	ENSSTOG00000031973	-	100	47.771	Ictidomys_tridecemlineatus
ENSCPBG00000009366	-	99	48.457	ENSJJAG00000016540	-	100	48.457	Jaculus_jaculus
ENSCPBG00000009366	-	100	55.077	ENSJJAG00000011823	-	100	55.077	Jaculus_jaculus
ENSCPBG00000009366	-	81	54.000	ENSLBEG00000024902	rbm7	55	53.503	Labrus_bergylta
ENSCPBG00000009366	-	88	64.417	ENSLACG00000018620	-	95	60.075	Latimeria_chalumnae
ENSCPBG00000009366	-	83	63.636	ENSLOCG00000002408	rbm7	94	48.897	Lepisosteus_oculatus
ENSCPBG00000009366	-	92	66.082	ENSLAFG00000012444	-	100	54.462	Loxodonta_africana
ENSCPBG00000009366	-	90	70.060	ENSMFAG00000000965	-	100	58.154	Macaca_fascicularis
ENSCPBG00000009366	-	90	69.461	ENSMMUG00000012270	RBM7	100	58.462	Macaca_mulatta
ENSCPBG00000009366	-	90	69.461	ENSMNEG00000005397	-	100	57.846	Macaca_nemestrina
ENSCPBG00000009366	-	90	70.060	ENSMLEG00000041953	-	100	57.846	Mandrillus_leucophaeus
ENSCPBG00000009366	-	93	49.143	ENSMAMG00000014145	rbm7	91	43.636	Mastacembelus_armatus
ENSCPBG00000009366	-	90	48.193	ENSMZEG00005013295	rbm7	58	48.193	Maylandia_zebra
ENSCPBG00000009366	-	89	70.482	ENSMGAG00000003004	-	100	56.748	Meleagris_gallopavo
ENSCPBG00000009366	-	84	70.968	ENSMAUG00000017938	-	99	68.293	Mesocricetus_auratus
ENSCPBG00000009366	-	100	54.769	ENSMAUG00000001942	-	100	54.769	Mesocricetus_auratus
ENSCPBG00000009366	-	84	73.077	ENSMICG00000042981	-	100	56.024	Microcebus_murinus
ENSCPBG00000009366	-	84	71.154	ENSMOCG00000009674	Rbm7	100	54.154	Microtus_ochrogaster
ENSCPBG00000009366	-	82	44.937	ENSMMOG00000004967	rbm7	81	51.765	Mola_mola
ENSCPBG00000009366	-	84	79.487	ENSMODG00000013918	-	100	62.691	Monodelphis_domestica
ENSCPBG00000009366	-	92	47.399	ENSMALG00000010901	rbm7	85	40.377	Monopterus_albus
ENSCPBG00000009366	-	84	71.795	MGP_CAROLIEiJ_G0032167	Rbm7	100	55.215	Mus_caroli
ENSCPBG00000009366	-	85	71.519	ENSMUSG00000042396	Rbm7	94	71.519	Mus_musculus
ENSCPBG00000009366	-	84	71.795	MGP_PahariEiJ_G0015035	Rbm7	100	55.385	Mus_pahari
ENSCPBG00000009366	-	84	71.795	MGP_SPRETEiJ_G0033306	Rbm7	94	62.738	Mus_spretus
ENSCPBG00000009366	-	100	57.231	ENSMPUG00000003941	-	100	58.769	Mustela_putorius_furo
ENSCPBG00000009366	-	83	69.935	ENSMLUG00000023234	-	99	52.960	Myotis_lucifugus
ENSCPBG00000009366	-	84	71.154	ENSNGAG00000006244	-	100	54.769	Nannospalax_galili
ENSCPBG00000009366	-	90	48.193	ENSNBRG00000017104	rbm7	58	48.193	Neolamprologus_brichardi
ENSCPBG00000009366	-	90	68.862	ENSNLEG00000029494	-	100	57.231	Nomascus_leucogenys
ENSCPBG00000009366	-	100	51.376	ENSMEUG00000006187	-	100	51.988	Notamacropus_eugenii
ENSCPBG00000009366	-	84	71.795	ENSOPRG00000011060	-	100	53.231	Ochotona_princeps
ENSCPBG00000009366	-	88	51.534	ENSODEG00000000186	-	96	40.938	Octodon_degus
ENSCPBG00000009366	-	85	72.152	ENSODEG00000010164	-	100	72.152	Octodon_degus
ENSCPBG00000009366	-	84	62.821	ENSODEG00000016844	-	100	62.162	Octodon_degus
ENSCPBG00000009366	-	90	50.602	ENSONIG00000005369	rbm7	55	54.140	Oreochromis_niloticus
ENSCPBG00000009366	-	84	76.282	ENSOANG00000001755	-	93	57.798	Ornithorhynchus_anatinus
ENSCPBG00000009366	-	84	73.077	ENSOCUG00000003342	-	100	56.923	Oryctolagus_cuniculus
ENSCPBG00000009366	-	81	52.000	ENSORLG00000028880	rbm7	55	52.229	Oryzias_latipes
ENSCPBG00000009366	-	81	52.667	ENSORLG00020010841	rbm7	55	52.866	Oryzias_latipes_hni
ENSCPBG00000009366	-	81	52.667	ENSORLG00015000536	rbm7	62	48.913	Oryzias_latipes_hsok
ENSCPBG00000009366	-	78	40.541	ENSOMEG00000000117	rbm7	56	41.892	Oryzias_melastigma
ENSCPBG00000009366	-	100	57.538	ENSOGAG00000016857	-	100	57.538	Otolemur_garnettii
ENSCPBG00000009366	-	54	59.596	ENSOGAG00000005760	RBM11	54	56.075	Otolemur_garnettii
ENSCPBG00000009366	-	100	56.615	ENSOARG00000000924	-	99	56.615	Ovis_aries
ENSCPBG00000009366	-	90	68.862	ENSPPAG00000027572	-	100	56.308	Pan_paniscus
ENSCPBG00000009366	-	100	56.923	ENSPPRG00000004372	-	100	56.923	Panthera_pardus
ENSCPBG00000009366	-	100	56.923	ENSPTIG00000013512	-	100	56.923	Panthera_tigris_altaica
ENSCPBG00000009366	-	90	68.862	ENSPTRG00000004305	RBM7	100	56.308	Pan_troglodytes
ENSCPBG00000009366	-	97	50.000	ENSPTRG00000049329	-	98	51.592	Pan_troglodytes
ENSCPBG00000009366	-	90	70.659	ENSPANG00000009431	-	100	57.846	Papio_anubis
ENSCPBG00000009366	-	89	62.424	ENSPKIG00000016648	rbm7	89	51.362	Paramormyrops_kingsleyae
ENSCPBG00000009366	-	81	55.629	ENSPMGG00000001523	rbm7	90	67.500	Periophthalmus_magnuspinnatus
ENSCPBG00000009366	-	84	70.513	ENSPEMG00000011553	-	96	62.353	Peromyscus_maniculatus_bairdii
ENSCPBG00000009366	-	98	61.755	ENSPCIG00000011225	-	84	62.997	Phascolarctos_cinereus
ENSCPBG00000009366	-	90	50.000	ENSPFOG00000002193	rbm7	54	54.140	Poecilia_formosa
ENSCPBG00000009366	-	90	48.795	ENSPLAG00000010517	rbm7	54	52.866	Poecilia_latipinna
ENSCPBG00000009366	-	81	54.667	ENSPMEG00000003603	rbm7	54	53.846	Poecilia_mexicana
ENSCPBG00000009366	-	81	54.667	ENSPREG00000015610	rbm7	54	53.846	Poecilia_reticulata
ENSCPBG00000009366	-	100	55.385	ENSPPYG00000003894	-	100	56.923	Pongo_abelii
ENSCPBG00000009366	-	54	61.616	ENSPCAG00000008368	-	75	57.944	Procavia_capensis
ENSCPBG00000009366	-	90	45.392	ENSPCAG00000003270	-	100	45.392	Procavia_capensis
ENSCPBG00000009366	-	84	72.903	ENSPVAG00000005294	-	100	56.000	Pteropus_vampyrus
ENSCPBG00000009366	-	90	48.193	ENSPNYG00000012084	rbm7	58	48.193	Pundamilia_nyererei
ENSCPBG00000009366	-	82	58.553	ENSPNAG00000012813	rbm7	59	56.875	Pygocentrus_nattereri
ENSCPBG00000009366	-	89	70.482	ENSRBIG00000044762	-	100	57.846	Rhinopithecus_bieti
ENSCPBG00000009366	-	90	70.060	ENSRROG00000032280	-	100	58.154	Rhinopithecus_roxellana
ENSCPBG00000009366	-	90	69.461	ENSSBOG00000027830	-	100	56.000	Saimiri_boliviensis_boliviensis
ENSCPBG00000009366	-	84	79.487	ENSSHAG00000008426	-	100	62.691	Sarcophilus_harrisii
ENSCPBG00000009366	-	82	62.745	ENSSFOG00015008458	rbm7	89	47.843	Scleropages_formosus
ENSCPBG00000009366	-	98	39.130	ENSSMAG00000003040	rbm7	63	47.977	Scophthalmus_maximus
ENSCPBG00000009366	-	97	39.198	ENSSDUG00000005361	rbm7	90	44.403	Seriola_dumerili
ENSCPBG00000009366	-	81	55.333	ENSSLDG00000003221	rbm7	90	44.403	Seriola_lalandi_dorsalis
ENSCPBG00000009366	-	90	68.227	ENSSPUG00000006032	-	99	71.906	Sphenodon_punctatus
ENSCPBG00000009366	-	90	52.410	ENSSPAG00000019320	rbm7	68	68.605	Stegastes_partitus
ENSCPBG00000009366	-	100	56.308	ENSSSCG00000027905	-	100	56.308	Sus_scrofa
ENSCPBG00000009366	-	85	68.153	ENSTGUG00000000117	-	100	52.923	Taeniopygia_guttata
ENSCPBG00000009366	-	84	46.471	ENSTRUG00000020355	rbm7	66	46.471	Takifugu_rubripes
ENSCPBG00000009366	-	100	52.000	ENSTBEG00000008650	-	100	52.000	Tupaia_belangeri
ENSCPBG00000009366	-	100	55.385	ENSTTRG00000001515	-	100	55.385	Tursiops_truncatus
ENSCPBG00000009366	-	100	59.077	ENSUAMG00000019095	-	100	59.077	Ursus_americanus
ENSCPBG00000009366	-	100	59.077	ENSUMAG00000003774	-	100	59.077	Ursus_maritimus
ENSCPBG00000009366	-	100	56.923	ENSVPAG00000006300	-	100	56.923	Vicugna_pacos
ENSCPBG00000009366	-	83	72.078	ENSXETG00000012654	rbm7	95	61.660	Xenopus_tropicalis
ENSCPBG00000009366	-	81	50.667	ENSXMAG00000000970	rbm7	54	50.000	Xiphophorus_maculatus