EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCPBG00000009376 (Gene tree)
Gene ID: 101931213
Gene Symbol: BRIP1
Alias: BACH1|FANCJ|OF
Full Name: BRCA1 interacting protein C-terminal helicase 1
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Plus strand
Length: 117164 bases
Position: chrKK088184.1:908067-1025230
Accession: 20473
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000012432	DEAD	PF00270.29	7e-06	1	1
ENSCPBP00000012423	DEAD	PF00270.29	8e-06	1	1
ENSCPBP00000012427	DEAD	PF00270.29	8e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000014802	BRIP1-202	5066	-	ENSCPBP00000012427	1290 (aa)	-	-
ENSCPBT00000014797	BRIP1-201	5049	-	ENSCPBP00000012423	1290 (aa)	-	-
ENSCPBT00000014807	BRIP1-203	4851	-	ENSCPBP00000012432	1216 (aa)	XP_023955455	UPI000CE63FFB

Gene Model

Click here to download ENSCPBG00000009376's gene model file

Pathways

Pathway ID	Pathway Name	Source
cpic03440	Homologous recombination	KEGG
cpic03460	Fanconi anemia pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000009376's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000009376	BRIP1	55	35.385	ENSAMEG00000001689	-	55	35.385	Ailuropoda_melanoleuca
ENSCPBG00000009376	BRIP1	67	71.183	ENSCJAG00000001292	BRIP1	100	71.183	Callithrix_jacchus
ENSCPBG00000009376	BRIP1	75	66.838	ENSCCAG00000024685	BRIP1	99	66.838	Cebus_capucinus
ENSCPBG00000009376	BRIP1	94	60.065	ENSCATG00000041725	BRIP1	99	60.065	Cercocebus_atys
ENSCPBG00000009376	BRIP1	97	58.721	ENSCSAG00000005928	BRIP1	99	58.721	Chlorocebus_sabaeus
ENSCPBG00000009376	BRIP1	98	59.102	ENSCANG00000032026	BRIP1	99	59.102	Colobus_angolensis_palliatus
ENSCPBG00000009376	BRIP1	70	85.075	ENSECAG00000024392	BRIP1	98	85.075	Equus_caballus
ENSCPBG00000009376	BRIP1	100	95.290	ENSGAGG00000003822	BRIP1	100	95.367	Gopherus_agassizii
ENSCPBG00000009376	BRIP1	98	58.865	ENSMFAG00000044136	BRIP1	99	58.865	Macaca_fascicularis
ENSCPBG00000009376	BRIP1	95	59.499	ENSMMUG00000009027	BRIP1	99	60.065	Macaca_mulatta
ENSCPBG00000009376	BRIP1	94	60.147	ENSMNEG00000040728	BRIP1	97	66.838	Macaca_nemestrina
ENSCPBG00000009376	BRIP1	98	58.708	ENSMLEG00000037601	BRIP1	99	58.708	Mandrillus_leucophaeus
ENSCPBG00000009376	BRIP1	98	58.944	ENSPANG00000022169	BRIP1	99	58.944	Papio_anubis
ENSCPBG00000009376	BRIP1	98	88.370	ENSPSIG00000018052	BRIP1	99	88.300	Pelodiscus_sinensis
ENSCPBG00000009376	BRIP1	55	37.288	ENSPCIG00000017939	-	56	38.596	Phascolarctos_cinereus
ENSCPBG00000009376	BRIP1	55	39.344	ENSRNOG00000027513	Rtel1	56	39.344	Rattus_norvegicus
ENSCPBG00000009376	BRIP1	95	59.286	ENSRBIG00000024082	BRIP1	98	59.286	Rhinopithecus_bieti
ENSCPBG00000009376	BRIP1	98	58.648	ENSSBOG00000035665	BRIP1	98	66.667	Saimiri_boliviensis_boliviensis