EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000009415 (Gene tree)
Gene ID: 101950226
Gene Symbol: HNRNPU
Alias: C1orf199|FLJ30202|FLJ37978|HNRNPU-AS1|HNRPU|NCRNA00201|SAF-A|hnRNPU
Full Name: heterogeneous nuclear ribonucleoprotein U
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Minus strand
Length: 15343 bases
Position: chrKK082962.1:4618331-4633673
Accession: 5048
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000012490	SAP	PF02037.27	3.6e-10	1	1
ENSCPBP00000012487	SAP	PF02037.27	3.7e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000014868	HNRNPU-201	2657	XM_005300547	ENSCPBP00000012487	810 (aa)	XP_005300604	-
ENSCPBT00000014871	HNRNPU-202	3950	-	ENSCPBP00000012490	809 (aa)	-	UPI000388DAD5

Gene Model

Click here to download ENSCPBG00000009415's gene model file

Pathways

Pathway ID	Pathway Name	Source
cpic03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000009415's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000009415	HNRNPU	70	50.688	ENSCPBG00000017963	-	78	51.717

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000009415	HNRNPU	88	91.532	ENSG00000153187	HNRNPU	100	100.000	Homo_sapiens
ENSCPBG00000009415	HNRNPU	79	73.585	ENSAPOG00000017400	hnrnpub	97	56.992	Acanthochromis_polyacanthus
ENSCPBG00000009415	HNRNPU	98	79.826	ENSAMEG00000009145	HNRNPU	100	77.607	Ailuropoda_melanoleuca
ENSCPBG00000009415	HNRNPU	78	67.797	ENSACIG00000012138	hnrnpub	97	59.612	Amphilophus_citrinellus
ENSCPBG00000009415	HNRNPU	79	75.472	ENSAOCG00000015843	hnrnpub	97	57.293	Amphiprion_ocellaris
ENSCPBG00000009415	HNRNPU	79	75.472	ENSAPEG00000014679	hnrnpub	97	57.293	Amphiprion_percula
ENSCPBG00000009415	HNRNPU	74	67.213	ENSATEG00000016178	hnrnpub	81	61.713	Anabas_testudineus
ENSCPBG00000009415	HNRNPU	78	83.333	ENSACAG00000004511	HNRNPU	72	87.086	Anolis_carolinensis
ENSCPBG00000009415	HNRNPU	88	91.331	ENSANAG00000033895	-	97	87.709	Aotus_nancymaae
ENSCPBG00000009415	HNRNPU	79	66.102	ENSACLG00000008165	hnrnpub	96	56.297	Astatotilapia_calliptera
ENSCPBG00000009415	HNRNPU	98	81.196	ENSBTAG00000007606	HNRNPU	100	80.024	Bos_taurus
ENSCPBG00000009415	HNRNPU	88	91.129	ENSCJAG00000016914	HNRNPU	97	87.523	Callithrix_jacchus
ENSCPBG00000009415	HNRNPU	98	79.826	ENSCAFG00020000918	HNRNPU	100	78.081	Canis_lupus_dingo
ENSCPBG00000009415	HNRNPU	98	80.075	ENSCHIG00000004900	HNRNPU	100	78.199	Capra_hircus
ENSCPBG00000009415	HNRNPU	98	81.125	ENSCPOG00000011887	HNRNPU	100	79.905	Cavia_porcellus
ENSCPBG00000009415	HNRNPU	88	91.129	ENSCCAG00000037859	-	97	87.523	Cebus_capucinus
ENSCPBG00000009415	HNRNPU	88	91.331	ENSCATG00000035273	HNRNPU	97	87.709	Cercocebus_atys
ENSCPBG00000009415	HNRNPU	98	81.125	ENSCLAG00000007100	HNRNPU	100	79.786	Chinchilla_lanigera
ENSCPBG00000009415	HNRNPU	98	79.826	ENSCSAG00000009219	HNRNPU	100	77.962	Chlorocebus_sabaeus
ENSCPBG00000009415	HNRNPU	78	82.812	ENSCHOG00000001387	HNRNPU	79	82.812	Choloepus_hoffmanni
ENSCPBG00000009415	HNRNPU	91	88.542	ENSCANG00000022780	HNRNPU	100	77.924	Colobus_angolensis_palliatus
ENSCPBG00000009415	HNRNPU	98	81.000	ENSCGRG00001020525	Hnrnpu	100	79.142	Cricetulus_griseus_chok1gshd
ENSCPBG00000009415	HNRNPU	84	63.388	ENSCSEG00000010804	hnrnpub	96	61.854	Cynoglossus_semilaevis
ENSCPBG00000009415	HNRNPU	78	69.492	ENSCVAG00000004280	hnrnpub	95	50.512	Cyprinodon_variegatus
ENSCPBG00000009415	HNRNPU	76	83.333	ENSDARG00000004735	hnrnpub	93	62.544	Danio_rerio
ENSCPBG00000009415	HNRNPU	75	78.261	ENSDARG00000015206	hnrnpua	97	56.757	Danio_rerio
ENSCPBG00000009415	HNRNPU	80	87.102	ENSDNOG00000000215	HNRNPU	90	88.245	Dasypus_novemcinctus
ENSCPBG00000009415	HNRNPU	98	78.000	ENSDORG00000015491	Hnrnpu	76	87.809	Dipodomys_ordii
ENSCPBG00000009415	HNRNPU	98	78.207	ENSETEG00000014565	HNRNPU	74	87.833	Echinops_telfairi
ENSCPBG00000009415	HNRNPU	98	79.577	ENSEASG00005003017	HNRNPU	100	78.081	Equus_asinus_asinus
ENSCPBG00000009415	HNRNPU	98	79.577	ENSECAG00000007955	HNRNPU	100	78.081	Equus_caballus
ENSCPBG00000009415	HNRNPU	77	67.164	ENSELUG00000010733	hnrnpub	86	61.165	Esox_lucius
ENSCPBG00000009415	HNRNPU	88	57.800	ENSELUG00000011966	hnrnpua	78	72.771	Esox_lucius
ENSCPBG00000009415	HNRNPU	88	91.129	ENSFCAG00000002156	HNRNPU	97	87.523	Felis_catus
ENSCPBG00000009415	HNRNPU	85	89.465	ENSFDAG00000006026	HNRNPU	100	87.356	Fukomys_damarensis
ENSCPBG00000009415	HNRNPU	66	67.797	ENSFHEG00000022639	hnrnpub	82	58.854	Fundulus_heteroclitus
ENSCPBG00000009415	HNRNPU	72	57.188	ENSGMOG00000001755	hnrnpub	79	59.425	Gadus_morhua
ENSCPBG00000009415	HNRNPU	100	90.170	ENSGALG00000010671	HNRNPU	100	90.194	Gallus_gallus
ENSCPBG00000009415	HNRNPU	78	70.588	ENSGAFG00000009369	hnrnpub	86	59.235	Gambusia_affinis
ENSCPBG00000009415	HNRNPU	71	60.948	ENSGACG00000004679	hnrnpub	74	60.423	Gasterosteus_aculeatus
ENSCPBG00000009415	HNRNPU	93	87.162	ENSGGOG00000004061	HNRNPU	97	87.896	Gorilla_gorilla
ENSCPBG00000009415	HNRNPU	79	66.102	ENSHBUG00000012290	hnrnpub	96	56.753	Haplochromis_burtoni
ENSCPBG00000009415	HNRNPU	98	80.798	ENSHGLG00000010594	-	100	78.766	Heterocephalus_glaber_female
ENSCPBG00000009415	HNRNPU	85	90.543	ENSHGLG00100015093	HNRNPU	100	88.353	Heterocephalus_glaber_male
ENSCPBG00000009415	HNRNPU	76	80.556	ENSHCOG00000020091	hnrnpub	86	77.273	Hippocampus_comes
ENSCPBG00000009415	HNRNPU	72	76.087	ENSIPUG00000007749	hnrnpu	96	66.078	Ictalurus_punctatus
ENSCPBG00000009415	HNRNPU	98	81.000	ENSJJAG00000011371	Hnrnpu	100	79.905	Jaculus_jaculus
ENSCPBG00000009415	HNRNPU	79	66.667	ENSKMAG00000004532	hnrnpub	92	58.075	Kryptolebias_marmoratus
ENSCPBG00000009415	HNRNPU	78	59.932	ENSLBEG00000022520	hnrnpub	81	61.073	Labrus_bergylta
ENSCPBG00000009415	HNRNPU	99	58.045	ENSLACG00000017463	HNRNPU	74	68.053	Latimeria_chalumnae
ENSCPBG00000009415	HNRNPU	78	78.723	ENSLOCG00000016652	hnrnpua	78	67.141	Lepisosteus_oculatus
ENSCPBG00000009415	HNRNPU	98	81.320	ENSLAFG00000021377	HNRNPU	100	79.905	Loxodonta_africana
ENSCPBG00000009415	HNRNPU	88	91.331	ENSMFAG00000037308	HNRNPU	97	87.709	Macaca_fascicularis
ENSCPBG00000009415	HNRNPU	98	80.151	ENSMMUG00000021098	HNRNPU	100	77.962	Macaca_mulatta
ENSCPBG00000009415	HNRNPU	88	91.331	ENSMNEG00000043645	HNRNPU	97	87.709	Macaca_nemestrina
ENSCPBG00000009415	HNRNPU	79	68.519	ENSMAMG00000007196	hnrnpub	82	62.413	Mastacembelus_armatus
ENSCPBG00000009415	HNRNPU	79	66.102	ENSMZEG00005003185	hnrnpub	96	56.449	Maylandia_zebra
ENSCPBG00000009415	HNRNPU	98	80.150	ENSMAUG00000008842	Hnrnpu	100	78.546	Mesocricetus_auratus
ENSCPBG00000009415	HNRNPU	88	92.137	ENSMICG00000004616	HNRNPU	97	88.454	Microcebus_murinus
ENSCPBG00000009415	HNRNPU	98	80.500	ENSMOCG00000015623	Hnrnpu	100	78.188	Microtus_ochrogaster
ENSCPBG00000009415	HNRNPU	98	78.692	ENSMODG00000006515	HNRNPU	100	77.894	Monodelphis_domestica
ENSCPBG00000009415	HNRNPU	78	62.687	ENSMALG00000018243	hnrnpub	85	62.872	Monopterus_albus
ENSCPBG00000009415	HNRNPU	98	79.950	MGP_CAROLIEiJ_G0014962	Hnrnpu	100	77.712	Mus_caroli
ENSCPBG00000009415	HNRNPU	98	79.574	ENSMUSG00000039630	Hnrnpu	100	77.950	Mus_musculus
ENSCPBG00000009415	HNRNPU	98	79.099	MGP_PahariEiJ_G0028193	Hnrnpu	100	77.619	Mus_pahari
ENSCPBG00000009415	HNRNPU	98	79.574	MGP_SPRETEiJ_G0015761	Hnrnpu	100	77.950	Mus_spretus
ENSCPBG00000009415	HNRNPU	88	88.870	ENSMLUG00000000475	HNRNPU	75	86.491	Myotis_lucifugus
ENSCPBG00000009415	HNRNPU	98	80.702	ENSNGAG00000019075	Hnrnpu	100	78.069	Nannospalax_galili
ENSCPBG00000009415	HNRNPU	79	66.102	ENSNBRG00000017855	hnrnpub	96	56.146	Neolamprologus_brichardi
ENSCPBG00000009415	HNRNPU	99	76.161	ENSMEUG00000000541	HNRNPU	99	76.265	Notamacropus_eugenii
ENSCPBG00000009415	HNRNPU	70	92.647	ENSODEG00000014458	-	100	92.647	Octodon_degus
ENSCPBG00000009415	HNRNPU	79	66.102	ENSONIG00000001260	hnrnpub	99	56.904	Oreochromis_niloticus
ENSCPBG00000009415	HNRNPU	98	81.320	ENSOCUG00000014469	HNRNPU	92	81.091	Oryctolagus_cuniculus
ENSCPBG00000009415	HNRNPU	79	68.966	ENSORLG00000016114	hnrnpub	97	56.372	Oryzias_latipes
ENSCPBG00000009415	HNRNPU	79	68.966	ENSORLG00020005363	hnrnpub	94	56.334	Oryzias_latipes_hni
ENSCPBG00000009415	HNRNPU	79	68.966	ENSORLG00015001190	hnrnpub	94	56.483	Oryzias_latipes_hsok
ENSCPBG00000009415	HNRNPU	78	76.087	ENSOMEG00000014951	hnrnpub	95	56.072	Oryzias_melastigma
ENSCPBG00000009415	HNRNPU	98	80.199	ENSOGAG00000014024	HNRNPU	100	77.962	Otolemur_garnettii
ENSCPBG00000009415	HNRNPU	78	90.653	ENSOARG00000004985	HNRNPU	89	87.500	Ovis_aries
ENSCPBG00000009415	HNRNPU	88	91.532	ENSPPAG00000038652	HNRNPU	97	87.896	Pan_paniscus
ENSCPBG00000009415	HNRNPU	98	81.343	ENSPPRG00000002662	HNRNPU	97	87.523	Panthera_pardus
ENSCPBG00000009415	HNRNPU	88	91.532	ENSPTRG00000002182	HNRNPU	97	87.896	Pan_troglodytes
ENSCPBG00000009415	HNRNPU	88	91.331	ENSPANG00000011643	HNRNPU	97	87.709	Papio_anubis
ENSCPBG00000009415	HNRNPU	89	66.841	ENSPKIG00000006885	hnrnpua	79	63.708	Paramormyrops_kingsleyae
ENSCPBG00000009415	HNRNPU	83	64.608	ENSPKIG00000022332	hnrnpub	91	63.084	Paramormyrops_kingsleyae
ENSCPBG00000009415	HNRNPU	88	91.532	ENSPCIG00000008657	HNRNPU	97	87.896	Phascolarctos_cinereus
ENSCPBG00000009415	HNRNPU	79	67.241	ENSPFOG00000002908	hnrnpub	86	59.831	Poecilia_formosa
ENSCPBG00000009415	HNRNPU	79	67.241	ENSPLAG00000004160	hnrnpub	86	60.034	Poecilia_latipinna
ENSCPBG00000009415	HNRNPU	98	77.584	ENSPCOG00000003883	-	76	86.207	Propithecus_coquereli
ENSCPBG00000009415	HNRNPU	88	91.935	ENSPCOG00000018655	-	97	88.268	Propithecus_coquereli
ENSCPBG00000009415	HNRNPU	98	80.822	ENSPVAG00000002581	HNRNPU	100	79.905	Pteropus_vampyrus
ENSCPBG00000009415	HNRNPU	79	66.102	ENSPNYG00000021642	hnrnpub	96	56.753	Pundamilia_nyererei
ENSCPBG00000009415	HNRNPU	79	65.391	ENSPNAG00000001055	hnrnpub	92	62.064	Pygocentrus_nattereri
ENSCPBG00000009415	HNRNPU	98	79.825	ENSRNOG00000033790	Hnrnpu	100	78.069	Rattus_norvegicus
ENSCPBG00000009415	HNRNPU	98	79.271	ENSRBIG00000031519	HNRNPU	93	89.964	Rhinopithecus_bieti
ENSCPBG00000009415	HNRNPU	98	80.528	ENSRROG00000041642	HNRNPU	100	77.897	Rhinopithecus_roxellana
ENSCPBG00000009415	HNRNPU	97	58.677	ENSSFOG00015001124	hnrnpub	79	63.482	Scleropages_formosus
ENSCPBG00000009415	HNRNPU	72	66.836	ENSSFOG00015019004	hnrnpu	80	63.426	Scleropages_formosus
ENSCPBG00000009415	HNRNPU	69	61.324	ENSSMAG00000003607	hnrnpub	65	61.538	Scophthalmus_maximus
ENSCPBG00000009415	HNRNPU	79	68.519	ENSSDUG00000005912	hnrnpub	67	62.587	Seriola_dumerili
ENSCPBG00000009415	HNRNPU	79	68.519	ENSSLDG00000004899	hnrnpub	67	62.413	Seriola_lalandi_dorsalis
ENSCPBG00000009415	HNRNPU	98	83.064	ENSSPUG00000011393	HNRNPU	100	81.043	Sphenodon_punctatus
ENSCPBG00000009415	HNRNPU	98	81.196	ENSSSCG00000010877	HNRNPU	100	80.142	Sus_scrofa
ENSCPBG00000009415	HNRNPU	86	61.179	ENSTRUG00000007759	hnrnpub	79	60.531	Takifugu_rubripes
ENSCPBG00000009415	HNRNPU	81	57.903	ENSTNIG00000009725	hnrnpub	89	58.418	Tetraodon_nigroviridis
ENSCPBG00000009415	HNRNPU	72	98.990	ENSTTRG00000005281	HNRNPU	70	98.990	Tursiops_truncatus
ENSCPBG00000009415	HNRNPU	88	91.532	ENSUAMG00000021120	HNRNPU	97	87.896	Ursus_americanus
ENSCPBG00000009415	HNRNPU	82	89.753	ENSUMAG00000012322	HNRNPU	98	83.627	Ursus_maritimus
ENSCPBG00000009415	HNRNPU	74	85.484	ENSVPAG00000010520	HNRNPU	91	82.309	Vicugna_pacos
ENSCPBG00000009415	HNRNPU	98	79.826	ENSVVUG00000026524	HNRNPU	100	78.081	Vulpes_vulpes
ENSCPBG00000009415	HNRNPU	98	63.951	ENSXETG00000011386	hnrnpu	75	74.916	Xenopus_tropicalis
ENSCPBG00000009415	HNRNPU	98	48.984	ENSXMAG00000010356	hnrnpub	89	59.068	Xiphophorus_maculatus