EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000009609 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Minus strand
Length: 57249 bases
Position: chrKK083469.1:152977-210225
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000012763	zf-C2H2	PF00096.26	9.5e-51	1	8
ENSCPBP00000012763	zf-C2H2	PF00096.26	9.5e-51	2	8
ENSCPBP00000012763	zf-C2H2	PF00096.26	9.5e-51	3	8
ENSCPBP00000012763	zf-C2H2	PF00096.26	9.5e-51	4	8
ENSCPBP00000012763	zf-C2H2	PF00096.26	9.5e-51	5	8
ENSCPBP00000012763	zf-C2H2	PF00096.26	9.5e-51	6	8
ENSCPBP00000012763	zf-C2H2	PF00096.26	9.5e-51	7	8
ENSCPBP00000012763	zf-C2H2	PF00096.26	9.5e-51	8	8
ENSCPBP00000012763	zf-met	PF12874.7	0.00016	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000015188	-	1281	-	ENSCPBP00000012763	426 (aa)	-	-

Gene Model

Click here to download ENSCPBG00000009609's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000009609's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000009609	-	90	55.330	ENSCPBG00000002063	-	66	55.330
ENSCPBG00000009609	-	88	37.597	ENSCPBG00000004542	ZNF865	78	37.597
ENSCPBG00000009609	-	92	57.062	ENSCPBG00000021479	-	93	57.062
ENSCPBG00000009609	-	96	54.762	ENSCPBG00000001421	-	98	57.736
ENSCPBG00000009609	-	83	56.429	ENSCPBG00000015987	-	72	56.028
ENSCPBG00000009609	-	97	61.993	ENSCPBG00000001181	-	99	61.011
ENSCPBG00000009609	-	72	35.691	ENSCPBG00000023418	-	52	31.724
ENSCPBG00000009609	-	93	48.586	ENSCPBG00000017489	-	99	53.623
ENSCPBG00000009609	-	92	54.571	ENSCPBG00000004990	-	100	56.272
ENSCPBG00000009609	-	96	58.175	ENSCPBG00000003130	-	99	58.175
ENSCPBG00000009609	-	97	57.212	ENSCPBG00000016841	-	98	63.758
ENSCPBG00000009609	-	96	63.333	ENSCPBG00000004030	-	85	62.109
ENSCPBG00000009609	-	94	52.489	ENSCPBG00000002014	-	66	51.145
ENSCPBG00000009609	-	83	44.311	ENSCPBG00000005586	-	67	44.444
ENSCPBG00000009609	-	93	50.545	ENSCPBG00000021487	-	80	51.546
ENSCPBG00000009609	-	92	55.801	ENSCPBG00000003774	-	95	58.824
ENSCPBG00000009609	-	92	51.190	ENSCPBG00000001272	-	89	64.171
ENSCPBG00000009609	-	80	34.516	ENSCPBG00000024735	PRDM5	81	34.516
ENSCPBG00000009609	-	86	35.452	ENSCPBG00000008580	-	82	37.542
ENSCPBG00000009609	-	79	55.678	ENSCPBG00000005703	-	54	55.678
ENSCPBG00000009609	-	97	64.372	ENSCPBG00000002430	-	87	58.974
ENSCPBG00000009609	-	97	54.839	ENSCPBG00000015500	-	90	57.053
ENSCPBG00000009609	-	79	45.109	ENSCPBG00000009849	-	78	45.109
ENSCPBG00000009609	-	81	42.460	ENSCPBG00000013652	-	82	42.460
ENSCPBG00000009609	-	97	56.458	ENSCPBG00000017494	-	90	52.877
ENSCPBG00000009609	-	86	44.876	ENSCPBG00000001526	-	84	44.876
ENSCPBG00000009609	-	81	63.253	ENSCPBG00000001258	-	93	61.714
ENSCPBG00000009609	-	97	56.410	ENSCPBG00000012976	-	99	54.573
ENSCPBG00000009609	-	93	57.233	ENSCPBG00000026433	-	68	53.691
ENSCPBG00000009609	-	88	35.083	ENSCPBG00000026947	ZNF319	93	35.083

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000009609	-	86	49.758	ENSAMXG00000043019	-	90	49.758	Astyanax_mexicanus
ENSCPBG00000009609	-	83	46.122	ENSAMXG00000034096	-	89	46.122	Astyanax_mexicanus
ENSCPBG00000009609	-	85	47.475	ENSAMXG00000044028	-	95	47.475	Astyanax_mexicanus
ENSCPBG00000009609	-	86	51.045	ENSAMXG00000000353	-	95	51.045	Astyanax_mexicanus
ENSCPBG00000009609	-	97	49.810	ENSAMXG00000029783	-	86	46.693	Astyanax_mexicanus
ENSCPBG00000009609	-	99	41.220	ENSBTAG00000014593	-	78	41.935	Bos_taurus
ENSCPBG00000009609	-	80	55.512	ENSBTAG00000040358	-	100	55.512	Bos_taurus
ENSCPBG00000009609	-	85	51.445	ENSCSAG00000000471	-	99	51.506	Chlorocebus_sabaeus
ENSCPBG00000009609	-	84	46.746	ENSDNOG00000042588	-	87	46.746	Dasypus_novemcinctus
ENSCPBG00000009609	-	81	38.660	ENSDNOG00000047529	-	70	38.660	Dasypus_novemcinctus
ENSCPBG00000009609	-	79	46.457	ENSEBUG00000013221	-	84	46.457	Eptatretus_burgeri
ENSCPBG00000009609	-	75	43.023	ENSEBUG00000016969	-	74	43.023	Eptatretus_burgeri
ENSCPBG00000009609	-	96	43.590	ENSEBUG00000016164	-	76	43.020	Eptatretus_burgeri
ENSCPBG00000009609	-	80	43.145	ENSELUG00000019008	-	89	37.466	Esox_lucius
ENSCPBG00000009609	-	86	51.880	ENSFCAG00000043966	-	99	51.880	Felis_catus
ENSCPBG00000009609	-	96	44.402	ENSGAFG00000021131	-	93	44.402	Gambusia_affinis
ENSCPBG00000009609	-	86	39.927	ENSGAFG00000013048	-	83	39.927	Gambusia_affinis
ENSCPBG00000009609	-	85	51.156	ENSGGOG00000042802	-	99	52.837	Gorilla_gorilla
ENSCPBG00000009609	-	85	41.463	ENSHCOG00000019512	-	90	41.463	Hippocampus_comes
ENSCPBG00000009609	-	94	35.372	ENSHCOG00000014713	-	98	37.719	Hippocampus_comes
ENSCPBG00000009609	-	84	51.546	ENSMFAG00000008648	-	99	51.546	Macaca_fascicularis
ENSCPBG00000009609	-	84	51.546	ENSMNEG00000001556	-	99	51.546	Macaca_nemestrina
ENSCPBG00000009609	-	88	51.445	ENSMLEG00000007035	-	99	51.445	Mandrillus_leucophaeus
ENSCPBG00000009609	-	91	40.964	ENSMAUG00000015263	-	63	41.520	Mesocricetus_auratus
ENSCPBG00000009609	-	79	45.522	ENSMOCG00000003394	-	62	42.357	Microtus_ochrogaster
ENSCPBG00000009609	-	87	44.214	ENSMODG00000028916	-	70	44.860	Monodelphis_domestica
ENSCPBG00000009609	-	83	45.270	ENSMPUG00000006562	-	58	43.824	Mustela_putorius_furo
ENSCPBG00000009609	-	78	43.842	ENSNBRG00000010194	-	65	43.842	Neolamprologus_brichardi
ENSCPBG00000009609	-	86	53.191	ENSNLEG00000018988	-	99	53.512	Nomascus_leucogenys
ENSCPBG00000009609	-	91	42.933	ENSMEUG00000006978	-	76	44.023	Notamacropus_eugenii
ENSCPBG00000009609	-	79	46.254	ENSMEUG00000012153	-	87	45.152	Notamacropus_eugenii
ENSCPBG00000009609	-	88	45.614	ENSOGAG00000024538	-	74	45.494	Otolemur_garnettii
ENSCPBG00000009609	-	85	51.156	ENSPPAG00000014496	-	99	52.837	Pan_paniscus
ENSCPBG00000009609	-	87	51.445	ENSPANG00000030207	-	99	51.445	Papio_anubis
ENSCPBG00000009609	-	96	51.304	ENSPSIG00000002565	-	55	53.333	Pelodiscus_sinensis
ENSCPBG00000009609	-	86	50.558	ENSPSIG00000010405	-	100	51.447	Pelodiscus_sinensis
ENSCPBG00000009609	-	93	49.825	ENSPSIG00000009650	-	80	49.477	Pelodiscus_sinensis
ENSCPBG00000009609	-	91	44.981	ENSPEMG00000010242	-	61	44.981	Peromyscus_maniculatus_bairdii
ENSCPBG00000009609	-	73	39.914	ENSPLAG00000020710	-	69	39.464	Poecilia_latipinna
ENSCPBG00000009609	-	96	43.386	ENSPLAG00000010389	-	99	36.979	Poecilia_latipinna
ENSCPBG00000009609	-	93	39.766	ENSPLAG00000021062	-	97	39.766	Poecilia_latipinna
ENSCPBG00000009609	-	81	45.588	ENSPCAG00000009106	-	81	45.588	Procavia_capensis
ENSCPBG00000009609	-	80	37.709	ENSPNYG00000024243	-	94	39.130	Pundamilia_nyererei
ENSCPBG00000009609	-	88	49.164	ENSPNAG00000018644	-	94	47.988	Pygocentrus_nattereri
ENSCPBG00000009609	-	81	45.263	ENSSHAG00000001415	-	83	47.576	Sarcophilus_harrisii
ENSCPBG00000009609	-	96	44.509	ENSSDUG00000009534	-	75	41.761	Seriola_dumerili
ENSCPBG00000009609	-	93	45.802	ENSSLDG00000013760	-	94	45.802	Seriola_lalandi_dorsalis
ENSCPBG00000009609	-	93	48.333	ENSSPUG00000007147	-	91	50.158	Sphenodon_punctatus
ENSCPBG00000009609	-	96	38.743	ENSTRUG00000006896	-	89	41.063	Takifugu_rubripes
ENSCPBG00000009609	-	96	51.852	ENSVPAG00000011867	-	96	51.852	Vicugna_pacos
ENSCPBG00000009609	-	83	38.043	ENSXCOG00000009794	-	93	35.426	Xiphophorus_couchianus