EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCPBG00000009702 (Gene tree)
Gene ID: 101945038
Gene Symbol: POLR2E
Alias: RPABC1|RPB5|XAP4|hRPB25|hsRPB5
Full Name: RNA polymerase II subunit E
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Plus strand
Length: 6249 bases
Position: chrKK082934.1:111499-117747
Accession: 9192
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000012903	RNA_pol_Rpb5_N	PF03871.14	1.5e-34	1	1
ENSCPBP00000012903	RNA_pol_Rpb5_C	PF01191.19	8.8e-35	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000015342	POLR2E-201	781	-	ENSCPBP00000012903	210 (aa)	XP_005281100	UPI00005EBFF7

Gene Model

Click here to download ENSCPBG00000009702's gene model file

Pathways

Pathway ID	Pathway Name	Source
cpic03020	RNA polymerase	KEGG
cpic04623	Cytosolic DNA-sensing pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000009702's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000009702	POLR2E	100	99.048	ENSG00000099817	POLR2E	100	99.048	Homo_sapiens
ENSCPBG00000009702	POLR2E	100	96.190	ENSAPOG00000002935	polr2eb	100	96.190	Acanthochromis_polyacanthus
ENSCPBG00000009702	POLR2E	100	99.524	ENSAMEG00000003159	POLR2E	100	99.524	Ailuropoda_melanoleuca
ENSCPBG00000009702	POLR2E	100	83.810	ENSACIG00000024371	polr2eb	100	83.810	Amphilophus_citrinellus
ENSCPBG00000009702	POLR2E	100	96.190	ENSAOCG00000018166	polr2eb	100	96.190	Amphiprion_ocellaris
ENSCPBG00000009702	POLR2E	100	96.190	ENSAPEG00000009000	polr2eb	100	96.190	Amphiprion_percula
ENSCPBG00000009702	POLR2E	100	96.190	ENSATEG00000023760	polr2eb	100	96.190	Anabas_testudineus
ENSCPBG00000009702	POLR2E	100	99.524	ENSANAG00000038488	POLR2E	100	99.524	Aotus_nancymaae
ENSCPBG00000009702	POLR2E	100	96.667	ENSACLG00000005254	polr2eb	100	96.667	Astatotilapia_calliptera
ENSCPBG00000009702	POLR2E	100	96.667	ENSAMXG00000018915	POLR2E	100	96.667	Astyanax_mexicanus
ENSCPBG00000009702	POLR2E	100	99.524	ENSBTAG00000020776	POLR2E	100	99.524	Bos_taurus
ENSCPBG00000009702	POLR2E	99	77.885	WBGene00019246	rpb-5	99	77.885	Caenorhabditis_elegans
ENSCPBG00000009702	POLR2E	67	95.000	ENSCJAG00000007666	-	77	95.000	Callithrix_jacchus
ENSCPBG00000009702	POLR2E	100	96.190	ENSCAFG00000019546	POLR2E	100	96.190	Canis_familiaris
ENSCPBG00000009702	POLR2E	100	99.524	ENSCAFG00020017111	POLR2E	100	99.524	Canis_lupus_dingo
ENSCPBG00000009702	POLR2E	100	99.524	ENSCHIG00000014151	POLR2E	100	99.524	Capra_hircus
ENSCPBG00000009702	POLR2E	100	80.930	ENSTSYG00000026377	POLR2E	100	80.930	Carlito_syrichta
ENSCPBG00000009702	POLR2E	91	99.479	ENSCAPG00000010843	POLR2E	93	99.479	Cavia_aperea
ENSCPBG00000009702	POLR2E	100	99.524	ENSCPOG00000001542	POLR2E	100	99.524	Cavia_porcellus
ENSCPBG00000009702	POLR2E	100	99.524	ENSCCAG00000025658	POLR2E	100	99.524	Cebus_capucinus
ENSCPBG00000009702	POLR2E	100	99.524	ENSCATG00000008926	POLR2E	100	99.524	Cercocebus_atys
ENSCPBG00000009702	POLR2E	100	99.048	ENSCLAG00000014874	-	100	99.048	Chinchilla_lanigera
ENSCPBG00000009702	POLR2E	98	76.098	ENSCLAG00000009238	-	100	76.098	Chinchilla_lanigera
ENSCPBG00000009702	POLR2E	100	99.524	ENSCSAG00000012336	POLR2E	100	99.524	Chlorocebus_sabaeus
ENSCPBG00000009702	POLR2E	100	86.190	ENSCING00000024933	-	99	86.190	Ciona_intestinalis
ENSCPBG00000009702	POLR2E	100	99.524	ENSCANG00000025560	POLR2E	100	99.524	Colobus_angolensis_palliatus
ENSCPBG00000009702	POLR2E	100	98.571	ENSCGRG00001022927	Polr2e	100	98.571	Cricetulus_griseus_chok1gshd
ENSCPBG00000009702	POLR2E	100	92.093	ENSCGRG00000016441	Polr2e	100	92.093	Cricetulus_griseus_crigri
ENSCPBG00000009702	POLR2E	100	95.238	ENSCSEG00000007107	polr2eb	92	95.238	Cynoglossus_semilaevis
ENSCPBG00000009702	POLR2E	100	96.190	ENSCVAG00000019940	polr2eb	100	96.190	Cyprinodon_variegatus
ENSCPBG00000009702	POLR2E	100	95.238	ENSDARG00000026183	polr2eb	100	95.238	Danio_rerio
ENSCPBG00000009702	POLR2E	90	99.474	ENSDNOG00000044994	POLR2E	84	99.474	Dasypus_novemcinctus
ENSCPBG00000009702	POLR2E	100	99.524	ENSDORG00000001154	Polr2e	100	99.524	Dipodomys_ordii
ENSCPBG00000009702	POLR2E	99	85.646	FBgn0033571	Rpb5	99	85.646	Drosophila_melanogaster
ENSCPBG00000009702	POLR2E	75	91.720	ENSEBUG00000010159	-	76	91.720	Eptatretus_burgeri
ENSCPBG00000009702	POLR2E	69	93.103	ENSEASG00005021615	POLR2E	67	87.037	Equus_asinus_asinus
ENSCPBG00000009702	POLR2E	91	98.429	ENSECAG00000011124	POLR2E	100	86.667	Equus_caballus
ENSCPBG00000009702	POLR2E	100	94.762	ENSELUG00000005815	POLR2E	100	94.762	Esox_lucius
ENSCPBG00000009702	POLR2E	100	93.810	ENSELUG00000020646	polr2e	100	93.810	Esox_lucius
ENSCPBG00000009702	POLR2E	100	99.048	ENSFCAG00000007318	POLR2E	100	99.048	Felis_catus
ENSCPBG00000009702	POLR2E	91	100.000	ENSFALG00000013986	POLR2E	99	100.000	Ficedula_albicollis
ENSCPBG00000009702	POLR2E	100	99.524	ENSFDAG00000014539	POLR2E	100	99.524	Fukomys_damarensis
ENSCPBG00000009702	POLR2E	100	96.190	ENSFHEG00000022398	polr2eb	100	96.190	Fundulus_heteroclitus
ENSCPBG00000009702	POLR2E	100	94.762	ENSGMOG00000007615	polr2eb	100	94.762	Gadus_morhua
ENSCPBG00000009702	POLR2E	100	100.000	ENSGALG00000002591	POLR2E	100	100.000	Gallus_gallus
ENSCPBG00000009702	POLR2E	100	96.667	ENSGAFG00000005087	polr2eb	100	96.667	Gambusia_affinis
ENSCPBG00000009702	POLR2E	100	94.762	ENSGACG00000013247	polr2eb	100	94.762	Gasterosteus_aculeatus
ENSCPBG00000009702	POLR2E	100	100.000	ENSGAGG00000008356	POLR2E	100	100.000	Gopherus_agassizii
ENSCPBG00000009702	POLR2E	100	99.524	ENSGGOG00000011267	POLR2E	100	99.524	Gorilla_gorilla
ENSCPBG00000009702	POLR2E	68	90.845	ENSHBUG00000011099	polr2eb	100	90.845	Haplochromis_burtoni
ENSCPBG00000009702	POLR2E	100	98.571	ENSHGLG00000013330	POLR2E	100	98.571	Heterocephalus_glaber_female
ENSCPBG00000009702	POLR2E	100	98.571	ENSHGLG00100011014	POLR2E	100	98.571	Heterocephalus_glaber_male
ENSCPBG00000009702	POLR2E	53	92.857	ENSHCOG00000012099	-	88	92.857	Hippocampus_comes
ENSCPBG00000009702	POLR2E	100	94.762	ENSHCOG00000000906	polr2eb	100	94.762	Hippocampus_comes
ENSCPBG00000009702	POLR2E	100	96.190	ENSIPUG00000019801	polr2e	100	96.190	Ictalurus_punctatus
ENSCPBG00000009702	POLR2E	100	99.524	ENSSTOG00000002853	POLR2E	100	99.524	Ictidomys_tridecemlineatus
ENSCPBG00000009702	POLR2E	100	98.571	ENSJJAG00000016595	-	100	98.571	Jaculus_jaculus
ENSCPBG00000009702	POLR2E	100	79.524	ENSJJAG00000003145	-	100	79.524	Jaculus_jaculus
ENSCPBG00000009702	POLR2E	77	80.745	ENSJJAG00000015812	-	100	80.745	Jaculus_jaculus
ENSCPBG00000009702	POLR2E	100	96.190	ENSKMAG00000005954	polr2eb	100	96.190	Kryptolebias_marmoratus
ENSCPBG00000009702	POLR2E	100	96.190	ENSLBEG00000024802	polr2eb	100	96.190	Labrus_bergylta
ENSCPBG00000009702	POLR2E	100	96.190	ENSLACG00000013686	POLR2E	100	96.190	Latimeria_chalumnae
ENSCPBG00000009702	POLR2E	77	97.531	ENSLOCG00000004599	POLR2E	100	97.531	Lepisosteus_oculatus
ENSCPBG00000009702	POLR2E	100	79.717	ENSLAFG00000025587	POLR2E	100	79.717	Loxodonta_africana
ENSCPBG00000009702	POLR2E	100	99.524	ENSMFAG00000002884	POLR2E	100	99.524	Macaca_fascicularis
ENSCPBG00000009702	POLR2E	100	99.524	ENSMMUG00000013927	POLR2E	100	99.524	Macaca_mulatta
ENSCPBG00000009702	POLR2E	100	66.351	ENSMNEG00000033452	-	100	66.351	Macaca_nemestrina
ENSCPBG00000009702	POLR2E	100	99.524	ENSMNEG00000034046	-	100	99.524	Macaca_nemestrina
ENSCPBG00000009702	POLR2E	92	81.347	ENSMLEG00000012405	POLR2E	94	81.347	Mandrillus_leucophaeus
ENSCPBG00000009702	POLR2E	100	96.190	ENSMAMG00000018703	polr2eb	100	96.190	Mastacembelus_armatus
ENSCPBG00000009702	POLR2E	90	96.316	ENSMZEG00005010796	polr2eb	96	96.316	Maylandia_zebra
ENSCPBG00000009702	POLR2E	100	98.578	ENSMGAG00000003769	POLR2E	100	98.578	Meleagris_gallopavo
ENSCPBG00000009702	POLR2E	100	67.619	ENSMAUG00000011003	-	100	67.619	Mesocricetus_auratus
ENSCPBG00000009702	POLR2E	92	97.927	ENSMAUG00000010125	-	100	98.429	Mesocricetus_auratus
ENSCPBG00000009702	POLR2E	100	99.524	ENSMICG00000013063	POLR2E	100	99.524	Microcebus_murinus
ENSCPBG00000009702	POLR2E	100	98.571	ENSMOCG00000013414	Polr2e	100	98.571	Microtus_ochrogaster
ENSCPBG00000009702	POLR2E	100	81.905	ENSMMOG00000001161	polr2eb	100	81.905	Mola_mola
ENSCPBG00000009702	POLR2E	91	86.911	ENSMMOG00000001167	polr2eb	88	86.911	Mola_mola
ENSCPBG00000009702	POLR2E	100	100.000	ENSMODG00000005494	POLR2E	100	100.000	Monodelphis_domestica
ENSCPBG00000009702	POLR2E	100	96.667	ENSMALG00000021888	polr2eb	100	96.667	Monopterus_albus
ENSCPBG00000009702	POLR2E	100	98.571	MGP_CAROLIEiJ_G0015561	Polr2e	100	98.571	Mus_caroli
ENSCPBG00000009702	POLR2E	100	98.571	ENSMUSG00000004667	Polr2e	100	98.571	Mus_musculus
ENSCPBG00000009702	POLR2E	100	98.571	MGP_PahariEiJ_G0030974	Polr2e	100	98.571	Mus_pahari
ENSCPBG00000009702	POLR2E	100	98.571	MGP_SPRETEiJ_G0016379	Polr2e	100	98.571	Mus_spretus
ENSCPBG00000009702	POLR2E	100	98.571	ENSMPUG00000008953	POLR2E	100	98.571	Mustela_putorius_furo
ENSCPBG00000009702	POLR2E	100	99.524	ENSMLUG00000013193	POLR2E	100	99.524	Myotis_lucifugus
ENSCPBG00000009702	POLR2E	66	93.478	ENSMLUG00000006376	-	100	82.099	Myotis_lucifugus
ENSCPBG00000009702	POLR2E	100	98.571	ENSNGAG00000001147	Polr2e	100	98.571	Nannospalax_galili
ENSCPBG00000009702	POLR2E	85	74.302	ENSNGAG00000017344	-	96	74.302	Nannospalax_galili
ENSCPBG00000009702	POLR2E	100	83.810	ENSNBRG00000022772	polr2eb	100	83.810	Neolamprologus_brichardi
ENSCPBG00000009702	POLR2E	100	95.735	ENSNLEG00000001207	-	100	95.735	Nomascus_leucogenys
ENSCPBG00000009702	POLR2E	100	75.714	ENSNLEG00000031364	-	100	75.714	Nomascus_leucogenys
ENSCPBG00000009702	POLR2E	100	86.667	ENSOPRG00000008331	POLR2E	100	86.667	Ochotona_princeps
ENSCPBG00000009702	POLR2E	100	99.524	ENSODEG00000013230	-	100	99.524	Octodon_degus
ENSCPBG00000009702	POLR2E	89	88.172	ENSODEG00000007985	-	100	88.172	Octodon_degus
ENSCPBG00000009702	POLR2E	100	71.905	ENSODEG00000011490	-	100	71.905	Octodon_degus
ENSCPBG00000009702	POLR2E	100	96.190	ENSONIG00000002519	polr2eb	100	96.190	Oreochromis_niloticus
ENSCPBG00000009702	POLR2E	100	96.667	ENSORLG00000015346	polr2eb	100	96.667	Oryzias_latipes
ENSCPBG00000009702	POLR2E	100	96.667	ENSORLG00020020700	polr2e	100	96.667	Oryzias_latipes_hni
ENSCPBG00000009702	POLR2E	100	96.667	ENSORLG00015016842	polr2e	100	96.667	Oryzias_latipes_hsok
ENSCPBG00000009702	POLR2E	100	96.190	ENSOMEG00000002709	polr2eb	100	96.190	Oryzias_melastigma
ENSCPBG00000009702	POLR2E	100	99.524	ENSOGAG00000012311	POLR2E	100	99.524	Otolemur_garnettii
ENSCPBG00000009702	POLR2E	100	99.524	ENSOARG00000010994	POLR2E	100	99.524	Ovis_aries
ENSCPBG00000009702	POLR2E	91	99.476	ENSPPAG00000003145	POLR2E	100	99.476	Pan_paniscus
ENSCPBG00000009702	POLR2E	100	99.048	ENSPPRG00000000777	POLR2E	100	99.048	Panthera_pardus
ENSCPBG00000009702	POLR2E	91	77.083	ENSPTIG00000012237	POLR2E	98	93.421	Panthera_tigris_altaica
ENSCPBG00000009702	POLR2E	100	99.524	ENSPTRG00000010183	POLR2E	100	99.524	Pan_troglodytes
ENSCPBG00000009702	POLR2E	100	99.524	ENSPANG00000018011	POLR2E	100	99.524	Papio_anubis
ENSCPBG00000009702	POLR2E	100	95.238	ENSPKIG00000024123	POLR2E	100	95.238	Paramormyrops_kingsleyae
ENSCPBG00000009702	POLR2E	100	95.238	ENSPKIG00000009607	POLR2E	100	95.238	Paramormyrops_kingsleyae
ENSCPBG00000009702	POLR2E	98	96.098	ENSPSIG00000002870	POLR2E	99	96.098	Pelodiscus_sinensis
ENSCPBG00000009702	POLR2E	100	83.333	ENSPMGG00000014354	polr2eb	100	83.333	Periophthalmus_magnuspinnatus
ENSCPBG00000009702	POLR2E	100	98.571	ENSPEMG00000023261	Polr2e	100	98.571	Peromyscus_maniculatus_bairdii
ENSCPBG00000009702	POLR2E	90	100.000	ENSPCIG00000007312	POLR2E	75	100.000	Phascolarctos_cinereus
ENSCPBG00000009702	POLR2E	100	96.667	ENSPFOG00000005734	polr2eb	100	96.667	Poecilia_formosa
ENSCPBG00000009702	POLR2E	100	96.667	ENSPLAG00000014496	polr2eb	100	96.667	Poecilia_latipinna
ENSCPBG00000009702	POLR2E	100	96.667	ENSPMEG00000008053	polr2eb	100	96.667	Poecilia_mexicana
ENSCPBG00000009702	POLR2E	100	96.667	ENSPREG00000006489	polr2eb	100	96.667	Poecilia_reticulata
ENSCPBG00000009702	POLR2E	100	91.943	ENSPPYG00000009305	POLR2E	100	91.943	Pongo_abelii
ENSCPBG00000009702	POLR2E	53	99.099	ENSPCAG00000016605	POLR2E	100	99.099	Procavia_capensis
ENSCPBG00000009702	POLR2E	100	99.524	ENSPCOG00000014491	POLR2E	100	99.524	Propithecus_coquereli
ENSCPBG00000009702	POLR2E	65	100.000	ENSPVAG00000007718	-	55	99.138	Pteropus_vampyrus
ENSCPBG00000009702	POLR2E	90	96.316	ENSPNYG00000019797	polr2eb	96	96.316	Pundamilia_nyererei
ENSCPBG00000009702	POLR2E	100	96.190	ENSPNAG00000026263	POLR2E	100	96.190	Pygocentrus_nattereri
ENSCPBG00000009702	POLR2E	100	98.571	ENSRNOG00000013545	Polr2e	100	98.571	Rattus_norvegicus
ENSCPBG00000009702	POLR2E	100	73.460	ENSRBIG00000027259	-	100	73.460	Rhinopithecus_bieti
ENSCPBG00000009702	POLR2E	100	99.524	ENSRBIG00000028726	-	100	99.524	Rhinopithecus_bieti
ENSCPBG00000009702	POLR2E	100	99.524	ENSRROG00000043763	POLR2E	100	99.524	Rhinopithecus_roxellana
ENSCPBG00000009702	POLR2E	99	43.578	YBR154C	RPB5	98	43.578	Saccharomyces_cerevisiae
ENSCPBG00000009702	POLR2E	100	99.524	ENSSBOG00000027241	POLR2E	100	99.524	Saimiri_boliviensis_boliviensis
ENSCPBG00000009702	POLR2E	100	100.000	ENSSHAG00000010690	POLR2E	100	100.000	Sarcophilus_harrisii
ENSCPBG00000009702	POLR2E	100	96.190	ENSSFOG00015006073	polr2e	100	96.190	Scleropages_formosus
ENSCPBG00000009702	POLR2E	100	96.190	ENSSMAG00000012782	polr2eb	100	96.190	Scophthalmus_maximus
ENSCPBG00000009702	POLR2E	100	96.190	ENSSDUG00000003352	polr2eb	100	96.190	Seriola_dumerili
ENSCPBG00000009702	POLR2E	100	96.190	ENSSLDG00000004965	polr2eb	100	96.190	Seriola_lalandi_dorsalis
ENSCPBG00000009702	POLR2E	100	98.571	ENSSPUG00000006114	POLR2E	100	98.571	Sphenodon_punctatus
ENSCPBG00000009702	POLR2E	100	96.190	ENSSPAG00000017556	polr2eb	100	96.190	Stegastes_partitus
ENSCPBG00000009702	POLR2E	100	99.524	ENSSSCG00000021472	POLR2E	100	99.524	Sus_scrofa
ENSCPBG00000009702	POLR2E	66	90.714	ENSTGUG00000000922	POLR2E	99	90.714	Taeniopygia_guttata
ENSCPBG00000009702	POLR2E	96	91.542	ENSTRUG00000018238	polr2eb	100	83.333	Takifugu_rubripes
ENSCPBG00000009702	POLR2E	100	96.190	ENSTNIG00000013187	polr2eb	100	96.190	Tetraodon_nigroviridis
ENSCPBG00000009702	POLR2E	100	99.048	ENSTTRG00000001484	POLR2E	100	99.048	Tursiops_truncatus
ENSCPBG00000009702	POLR2E	92	96.392	ENSUAMG00000009166	POLR2E	100	86.190	Ursus_americanus
ENSCPBG00000009702	POLR2E	100	99.524	ENSVVUG00000022818	POLR2E	54	99.524	Vulpes_vulpes
ENSCPBG00000009702	POLR2E	100	98.095	ENSXETG00000003291	polr2e	100	98.095	Xenopus_tropicalis
ENSCPBG00000009702	POLR2E	100	83.810	ENSXCOG00000009197	polr2eb	100	83.810	Xiphophorus_couchianus
ENSCPBG00000009702	POLR2E	100	96.667	ENSXMAG00000026495	polr2eb	100	96.667	Xiphophorus_maculatus