EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000009849 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Plus strand
Length: 42517 bases
Position: chrKK083479.1:62335-104851
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000013119	zf-C2H2	PF00096.26	1.6e-33	1	6
ENSCPBP00000013119	zf-C2H2	PF00096.26	1.6e-33	2	6
ENSCPBP00000013119	zf-C2H2	PF00096.26	1.6e-33	3	6
ENSCPBP00000013119	zf-C2H2	PF00096.26	1.6e-33	4	6
ENSCPBP00000013119	zf-C2H2	PF00096.26	1.6e-33	5	6
ENSCPBP00000013119	zf-C2H2	PF00096.26	1.6e-33	6	6
ENSCPBP00000013119	zf-met	PF12874.7	3.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000015585	-	777	-	ENSCPBP00000013119	258 (aa)	-	-

Gene Model

Click here to download ENSCPBG00000009849's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000009849's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000009849	-	83	57.353	ENSCPBG00000017494	-	90	52.105
ENSCPBG00000009849	-	91	53.631	ENSCPBG00000001421	-	98	52.020
ENSCPBG00000009849	-	83	53.797	ENSCPBG00000005703	-	50	53.797
ENSCPBG00000009849	-	83	52.427	ENSCPBG00000004990	-	100	50.000
ENSCPBG00000009849	-	83	57.051	ENSCPBG00000015500	-	91	54.386
ENSCPBG00000009849	-	90	52.101	ENSCPBG00000012976	-	94	51.136
ENSCPBG00000009849	-	83	48.921	ENSCPBG00000026433	-	62	48.921
ENSCPBG00000009849	-	97	48.958	ENSCPBG00000001181	-	96	52.252
ENSCPBG00000009849	-	85	43.114	ENSCPBG00000005715	ZBTB49	50	43.114
ENSCPBG00000009849	-	78	49.724	ENSCPBG00000005586	-	67	49.724
ENSCPBG00000009849	-	78	45.109	ENSCPBG00000009609	-	79	45.109
ENSCPBG00000009849	-	85	54.110	ENSCPBG00000003774	-	90	52.475
ENSCPBG00000009849	-	82	46.154	ENSCPBG00000001258	-	91	46.154
ENSCPBG00000009849	-	81	52.000	ENSCPBG00000002063	-	54	52.000
ENSCPBG00000009849	-	92	47.059	ENSCPBG00000003130	-	98	49.296
ENSCPBG00000009849	-	90	40.741	ENSCPBG00000004542	ZNF865	80	40.741
ENSCPBG00000009849	-	92	47.059	ENSCPBG00000015987	-	82	44.186
ENSCPBG00000009849	-	84	48.592	ENSCPBG00000021479	-	83	48.592
ENSCPBG00000009849	-	79	42.623	ENSCPBG00000013652	-	67	42.623
ENSCPBG00000009849	-	83	53.922	ENSCPBG00000016841	-	97	53.922
ENSCPBG00000009849	-	87	50.000	ENSCPBG00000004030	-	78	47.586
ENSCPBG00000009849	-	84	51.829	ENSCPBG00000001272	-	74	48.947
ENSCPBG00000009849	-	93	46.305	ENSCPBG00000008580	-	75	46.305
ENSCPBG00000009849	-	88	46.907	ENSCPBG00000021487	-	73	46.907
ENSCPBG00000009849	-	85	50.769	ENSCPBG00000017489	-	97	50.769
ENSCPBG00000009849	-	83	43.655	ENSCPBG00000001526	-	84	43.655
ENSCPBG00000009849	-	84	38.947	ENSCPBG00000026947	ZNF319	90	38.947
ENSCPBG00000009849	-	78	43.333	ENSCPBG00000004296	ZBTB47	83	42.857
ENSCPBG00000009849	-	83	51.111	ENSCPBG00000002430	-	80	51.111
ENSCPBG00000009849	-	83	51.111	ENSCPBG00000002014	-	50	53.488

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000009849	-	83	45.055	ENSATEG00000010859	-	93	44.385	Anabas_testudineus
ENSCPBG00000009849	-	83	51.479	ENSAMXG00000042593	-	91	51.479	Astyanax_mexicanus
ENSCPBG00000009849	-	83	48.276	ENSAMXG00000039700	-	89	48.276	Astyanax_mexicanus
ENSCPBG00000009849	-	83	54.545	ENSAMXG00000039432	-	94	54.545	Astyanax_mexicanus
ENSCPBG00000009849	-	78	53.947	ENSAMXG00000042633	-	90	54.737	Astyanax_mexicanus
ENSCPBG00000009849	-	83	50.820	ENSAMXG00000029960	-	94	50.820	Astyanax_mexicanus
ENSCPBG00000009849	-	83	53.153	ENSAMXG00000031794	-	95	53.153	Astyanax_mexicanus
ENSCPBG00000009849	-	84	46.269	ENSAMXG00000039977	-	94	46.269	Astyanax_mexicanus
ENSCPBG00000009849	-	85	53.901	ENSAMXG00000013274	-	92	52.239	Astyanax_mexicanus
ENSCPBG00000009849	-	83	51.887	ENSELUG00000009575	-	99	50.685	Esox_lucius
ENSCPBG00000009849	-	79	56.000	ENSIPUG00000015121	-	57	56.000	Ictalurus_punctatus
ENSCPBG00000009849	-	83	51.000	ENSKMAG00000000543	-	99	44.340	Kryptolebias_marmoratus
ENSCPBG00000009849	-	83	42.286	ENSMAMG00000016519	-	84	46.667	Mastacembelus_armatus
ENSCPBG00000009849	-	84	50.467	ENSMZEG00005020574	-	85	50.467	Maylandia_zebra
ENSCPBG00000009849	-	83	44.865	ENSONIG00000007088	-	100	44.865	Oreochromis_niloticus
ENSCPBG00000009849	-	95	47.802	ENSPSIG00000000075	-	72	47.802	Pelodiscus_sinensis
ENSCPBG00000009849	-	83	55.128	ENSPNAG00000008480	-	94	55.128	Pygocentrus_nattereri
ENSCPBG00000009849	-	85	46.305	ENSPNAG00000012215	-	85	46.305	Pygocentrus_nattereri
ENSCPBG00000009849	-	89	44.390	ENSSMAG00000007396	-	78	44.390	Scophthalmus_maximus
ENSCPBG00000009849	-	84	56.589	ENSTBEG00000012287	-	99	56.589	Tupaia_belangeri