EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCPBG00000009942 (Gene tree)
Gene ID
101940560
Gene Symbol
MSI2
Alias
-
Full Name
musashi RNA binding protein 2
Gene Type
protein_coding
Species
Chrysemys_picta_bellii
Status
putative
Strand
Minus strand
Length
398975 bases
Position
chrKK088184.1:3864114-4263088
Accession
18585
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCPBP00000013459RRM_1PF00076.221.2e-1911
ENSCPBP00000013454RRM_1PF00076.222.1e-1911
ENSCPBP00000013421RRM_1PF00076.222.5e-1911
ENSCPBP00000013415RRM_1PF00076.222.9e-1911
ENSCPBP00000013413RRM_1PF00076.224.4e-1911
ENSCPBP00000013407RRM_1PF00076.224.8e-1911
ENSCPBP00000013404RRM_1PF00076.225.1e-1911
ENSCPBP00000013385RRM_1PF00076.225.4e-1911
ENSCPBP00000013302RRM_1PF00076.225.7e-1911
ENSCPBP00000013383RRM_1PF00076.225.8e-1911
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCPBT00000015973MSI2-2102129-ENSCPBP00000013459223 (aa)--
ENSCPBT00000015791MSI2-2011731-ENSCPBP00000013302381 (aa)--
ENSCPBT00000015886MSI2-2021767-ENSCPBP00000013383381 (aa)XP_008177063UPI00046C0F55
ENSCPBT00000015888MSI2-2031743-ENSCPBP00000013385373 (aa)XP_008177065UPI00046BF70C
ENSCPBT00000015968MSI2-2091095-ENSCPBP00000013454364 (aa)--
ENSCPBT00000015929MSI2-2081455-ENSCPBP00000013421277 (aa)XP_023955446UPI000CE63BF3
ENSCPBT00000015923MSI2-2071566-ENSCPBP00000013415314 (aa)XP_008177071UPI00046BF4C8
ENSCPBT00000015912MSI2-2051695-ENSCPBP00000013407357 (aa)--
ENSCPBT00000015908MSI2-2041719-ENSCPBP00000013404365 (aa)--
ENSCPBT00000015918MSI2-2061632-ENSCPBP00000013413336 (aa)XP_008177069UPI00046C3C45
Gene Model
Click here to download ENSCPBG00000009942's gene model file
Pathways
Pathway IDPathway NameSource
cpic03015mRNA surveillance pathwayKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000009942's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCPBG00000009942MSI26138.298ENSCPBG00000018623-7138.298
ENSCPBG00000009942MSI25945.312ENSCPBG00000008025HNRNPD7642.169
ENSCPBG00000009942MSI26037.879ENSCPBG00000022326-9537.634
ENSCPBG00000009942MSI26441.538ENSCPBG00000008738HNRNPA09532.271
ENSCPBG00000009942MSI29775.983ENSCPBG00000011349MSI19283.333
ENSCPBG00000009942MSI26038.636ENSCPBG00000003430HNRNPA38034.579
ENSCPBG00000009942MSI26048.837ENSCPBG00000008014HNRNPDL8739.286
ENSCPBG00000009942MSI26140.230ENSCPBG00000022485HNRNPA2B18837.113
ENSCPBG00000009942MSI25847.287ENSCPBG00000008819HNRNPAB7944.000
ENSCPBG00000009942MSI26831.169ENSCPBG00000024059RBM386730.864
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCPBG00000009942MSI29693.688ENSG00000153944MSI210093.688Homo_sapiens
ENSCPBG00000009942MSI28994.475ENSAPOG00000001658msi2a10087.692Acanthochromis_polyacanthus
ENSCPBG00000009942MSI29693.688ENSAMEG00000002697MSI29795.767Ailuropoda_melanoleuca
ENSCPBG00000009942MSI29684.348ENSACIG00000009475msi2a10079.028Amphilophus_citrinellus
ENSCPBG00000009942MSI25883.146ENSAOCG00000014822msi2a5883.146Amphiprion_ocellaris
ENSCPBG00000009942MSI29586.142ENSAPEG00000007706msi2a9394.581Amphiprion_percula
ENSCPBG00000009942MSI29587.266ENSATEG00000003301-10095.074Anabas_testudineus
ENSCPBG00000009942MSI28994.475ENSATEG00000010498msi2a10087.692Anabas_testudineus
ENSCPBG00000009942MSI29898.045ENSACAG00000005452MSI29098.045Anolis_carolinensis
ENSCPBG00000009942MSI29591.760ENSANAG00000037827MSI29499.015Aotus_nancymaae
ENSCPBG00000009942MSI28993.923ENSACLG00000007752msi2a10087.692Astatotilapia_calliptera
ENSCPBG00000009942MSI29588.764ENSAMXG00000010474msi2b9796.552Astyanax_mexicanus
ENSCPBG00000009942MSI29589.179ENSAMXG00000032796msi2a9496.569Astyanax_mexicanus
ENSCPBG00000009942MSI29591.386ENSBTAG00000004406MSI29799.015Bos_taurus
ENSCPBG00000009942MSI28757.209WBGene00003423msi-18057.209Caenorhabditis_elegans
ENSCPBG00000009942MSI29591.760ENSCJAG00000013998MSI29499.015Callithrix_jacchus
ENSCPBG00000009942MSI29693.688ENSCAFG00020025620MSI27898.795Canis_lupus_dingo
ENSCPBG00000009942MSI29591.386ENSCHIG00000016580MSI29499.015Capra_hircus
ENSCPBG00000009942MSI29791.544ENSCPOG00000034042MSI29698.558Cavia_porcellus
ENSCPBG00000009942MSI29591.760ENSCCAG00000033927MSI29499.015Cebus_capucinus
ENSCPBG00000009942MSI29591.760ENSCATG00000040879MSI29499.015Cercocebus_atys
ENSCPBG00000009942MSI29693.688ENSCLAG00000014325MSI29493.688Chinchilla_lanigera
ENSCPBG00000009942MSI29591.760ENSCSAG00000005633MSI29499.015Chlorocebus_sabaeus
ENSCPBG00000009942MSI26698.039ENSCHOG00000008660MSI27498.039Choloepus_hoffmanni
ENSCPBG00000009942MSI25672.000ENSCING00000018579-9753.846Ciona_intestinalis
ENSCPBG00000009942MSI27768.786ENSCSAVG00000010397-9455.906Ciona_savignyi
ENSCPBG00000009942MSI29693.688ENSCANG00000036414MSI210093.688Colobus_angolensis_palliatus
ENSCPBG00000009942MSI29591.418ENSCGRG00001013330Msi29499.015Cricetulus_griseus_chok1gshd
ENSCPBG00000009942MSI29693.377ENSCGRG00000003141Msi210093.377Cricetulus_griseus_crigri
ENSCPBG00000009942MSI26974.093ENSCSEG00000013557msi2a8380.734Cynoglossus_semilaevis
ENSCPBG00000009942MSI25865.854ENSCSEG00000013549msi2a8865.854Cynoglossus_semilaevis
ENSCPBG00000009942MSI29578.277ENSCSEG00000003266-10077.465Cynoglossus_semilaevis
ENSCPBG00000009942MSI29585.985ENSCVAG00000017075msi2a9394.505Cyprinodon_variegatus
ENSCPBG00000009942MSI28997.790ENSDARG00000032614msi2b10098.889Danio_rerio
ENSCPBG00000009942MSI29683.478ENSDARG00000033901msi2a9583.478Danio_rerio
ENSCPBG00000009942MSI29591.760ENSDNOG00000014501MSI210099.015Dasypus_novemcinctus
ENSCPBG00000009942MSI26596.970ENSDORG00000005394Msi28092.958Dipodomys_ordii
ENSCPBG00000009942MSI25898.649ENSDORG00000028440-10098.649Dipodomys_ordii
ENSCPBG00000009942MSI29462.500FBgn0260943Rbp69365.563Drosophila_melanogaster
ENSCPBG00000009942MSI26875.658ENSETEG00000012450-6475.658Echinops_telfairi
ENSCPBG00000009942MSI28181.868ENSEBUG00000006732msi2a7981.868Eptatretus_burgeri
ENSCPBG00000009942MSI29491.429ENSEASG00005002965MSI29784.591Equus_asinus_asinus
ENSCPBG00000009942MSI29693.355ENSECAG00000011435MSI29493.355Equus_caballus
ENSCPBG00000009942MSI29077.689ENSEEUG00000007810MSI210083.663Erinaceus_europaeus
ENSCPBG00000009942MSI28996.133ENSELUG00000001361msi2b8995.082Esox_lucius
ENSCPBG00000009942MSI29587.640ENSELUG00000011747msi2a9397.044Esox_lucius
ENSCPBG00000009942MSI25780.000ENSFCAG00000033787-6780.000Felis_catus
ENSCPBG00000009942MSI29591.760ENSFCAG00000041686MSI29499.015Felis_catus
ENSCPBG00000009942MSI29693.688ENSFDAG00000016118MSI210093.688Fukomys_damarensis
ENSCPBG00000009942MSI28994.475ENSFHEG00000000084msi2a9394.581Fundulus_heteroclitus
ENSCPBG00000009942MSI25495.349ENSGMOG00000007596-8095.349Gadus_morhua
ENSCPBG00000009942MSI29694.020ENSGALG00000005567MSI29494.020Gallus_gallus
ENSCPBG00000009942MSI29076.357ENSGAFG00000006974msi2a9978.947Gambusia_affinis
ENSCPBG00000009942MSI296100.000ENSGAGG00000016542MSI2100100.000Gopherus_agassizii
ENSCPBG00000009942MSI29693.688ENSGGOG00000013182MSI210093.688Gorilla_gorilla
ENSCPBG00000009942MSI28993.923ENSHBUG00000020800msi2a10087.692Haplochromis_burtoni
ENSCPBG00000009942MSI28695.349ENSHGLG00000012444MSI27795.349Heterocephalus_glaber_female
ENSCPBG00000009942MSI27191.928ENSHGLG00100003744MSI210091.928Heterocephalus_glaber_male
ENSCPBG00000009942MSI25897.368ENSHGLG00100004028-8798.667Heterocephalus_glaber_male
ENSCPBG00000009942MSI29183.085ENSHCOG00000017241-9862.379Hippocampus_comes
ENSCPBG00000009942MSI28993.923ENSHCOG00000000266msi2a8593.596Hippocampus_comes
ENSCPBG00000009942MSI28997.238ENSIPUG00000021097msi2a9397.253Ictalurus_punctatus
ENSCPBG00000009942MSI29686.087ENSIPUG00000003732msi2b10084.507Ictalurus_punctatus
ENSCPBG00000009942MSI29791.544ENSSTOG00000007884MSI29698.558Ictidomys_tridecemlineatus
ENSCPBG00000009942MSI26790.452ENSJJAG00000006292-9499.029Jaculus_jaculus
ENSCPBG00000009942MSI25898.649ENSJJAG00000009467-10098.649Jaculus_jaculus
ENSCPBG00000009942MSI29683.768ENSKMAG00000009494msi2a9093.596Kryptolebias_marmoratus
ENSCPBG00000009942MSI28994.475ENSLBEG00000007061msi2a9394.581Labrus_bergylta
ENSCPBG00000009942MSI29672.571ENSLBEG00000026223-9772.571Labrus_bergylta
ENSCPBG00000009942MSI257100.000ENSLACG00000016798MSI289100.000Latimeria_chalumnae
ENSCPBG00000009942MSI29688.696ENSLOCG00000004675msi2b9588.696Lepisosteus_oculatus
ENSCPBG00000009942MSI29693.688ENSMFAG00000003775MSI210093.688Macaca_fascicularis
ENSCPBG00000009942MSI29693.688ENSMMUG00000002069MSI210093.688Macaca_mulatta
ENSCPBG00000009942MSI29591.760ENSMNEG00000045275MSI29499.015Macaca_nemestrina
ENSCPBG00000009942MSI29693.688ENSMLEG00000033888MSI210093.688Mandrillus_leucophaeus
ENSCPBG00000009942MSI28995.028ENSMAMG00000002488-8895.074Mastacembelus_armatus
ENSCPBG00000009942MSI28994.475ENSMAMG00000010503msi2a10087.692Mastacembelus_armatus
ENSCPBG00000009942MSI28993.923ENSMZEG00005007676msi2a9494.089Maylandia_zebra
ENSCPBG00000009942MSI29693.377ENSMAUG00000003862Msi29493.377Mesocricetus_auratus
ENSCPBG00000009942MSI29591.760ENSMICG00000013598-9499.015Microcebus_murinus
ENSCPBG00000009942MSI27789.552ENSMICG00000032913-9486.111Microcebus_murinus
ENSCPBG00000009942MSI29693.688ENSMOCG00000005820Msi29493.688Microtus_ochrogaster
ENSCPBG00000009942MSI28591.534ENSMMOG00000008348msi2a8594.505Mola_mola
ENSCPBG00000009942MSI27191.480ENSMODG00000014790MSI210091.480Monodelphis_domestica
ENSCPBG00000009942MSI29794.565ENSMALG00000000071msi2a10087.692Monopterus_albus
ENSCPBG00000009942MSI29693.688MGP_CAROLIEiJ_G0016948Msi210098.649Mus_caroli
ENSCPBG00000009942MSI29693.688ENSMUSG00000069769Msi210098.649Mus_musculus
ENSCPBG00000009942MSI29693.688MGP_PahariEiJ_G0018079Msi210098.649Mus_pahari
ENSCPBG00000009942MSI29693.688MGP_SPRETEiJ_G0017795Msi210098.649Mus_spretus
ENSCPBG00000009942MSI29591.760ENSMPUG00000015377MSI29799.015Mustela_putorius_furo
ENSCPBG00000009942MSI29591.760ENSMLUG00000007865MSI29799.015Myotis_lucifugus
ENSCPBG00000009942MSI29693.688ENSNGAG00000017807Msi29493.688Nannospalax_galili
ENSCPBG00000009942MSI29585.768ENSNBRG00000014596msi2a9394.089Neolamprologus_brichardi
ENSCPBG00000009942MSI29693.688ENSNLEG00000008059MSI29498.895Nomascus_leucogenys
ENSCPBG00000009942MSI26888.158ENSOPRG00000000872-6488.158Ochotona_princeps
ENSCPBG00000009942MSI29693.688ENSODEG00000011974MSI29493.688Octodon_degus
ENSCPBG00000009942MSI25895.556ENSONIG00000001972msi2a7295.556Oreochromis_niloticus
ENSCPBG00000009942MSI295100.000ENSOANG00000005667MSI29784.324Ornithorhynchus_anatinus
ENSCPBG00000009942MSI29591.760ENSOCUG00000010440MSI29799.015Oryctolagus_cuniculus
ENSCPBG00000009942MSI29586.142ENSORLG00000009671msi2a9494.581Oryzias_latipes
ENSCPBG00000009942MSI28994.475ENSORLG00020021556msi2a9494.581Oryzias_latipes_hni
ENSCPBG00000009942MSI29586.142ENSORLG00015004592msi2a9494.581Oryzias_latipes_hsok
ENSCPBG00000009942MSI29586.364ENSOMEG00000000146msi2a9994.554Oryzias_melastigma
ENSCPBG00000009942MSI29586.517ENSOGAG00000005621MSI29992.958Otolemur_garnettii
ENSCPBG00000009942MSI29693.688ENSPPAG00000037697MSI210093.688Pan_paniscus
ENSCPBG00000009942MSI29591.760ENSPPRG00000001848MSI29499.015Panthera_pardus
ENSCPBG00000009942MSI29480.000ENSPTIG00000021873-9076.256Panthera_tigris_altaica
ENSCPBG00000009942MSI29693.688ENSPTIG00000021678MSI29693.688Panthera_tigris_altaica
ENSCPBG00000009942MSI29693.688ENSPTRG00000009437MSI210093.688Pan_troglodytes
ENSCPBG00000009942MSI29591.760ENSPANG00000022319MSI29499.015Papio_anubis
ENSCPBG00000009942MSI29284.762ENSPKIG00000007038-8993.407Paramormyrops_kingsleyae
ENSCPBG00000009942MSI296100.000ENSPSIG00000008618MSI295100.000Pelodiscus_sinensis
ENSCPBG00000009942MSI29585.393ENSPMGG00000005888msi2a9394.089Periophthalmus_magnuspinnatus
ENSCPBG00000009942MSI25898.649ENSPEMG00000021793-10098.649Peromyscus_maniculatus_bairdii
ENSCPBG00000009942MSI29693.688ENSPCIG00000006063MSI29493.355Phascolarctos_cinereus
ENSCPBG00000009942MSI25690.909ENSPFOG00000019337MSI27490.909Poecilia_formosa
ENSCPBG00000009942MSI25896.000ENSPLAG00000000436msi2a6196.000Poecilia_latipinna
ENSCPBG00000009942MSI25896.000ENSPMEG00000013247msi2a6296.000Poecilia_mexicana
ENSCPBG00000009942MSI28994.475ENSPREG00000000881msi2a9294.581Poecilia_reticulata
ENSCPBG00000009942MSI27696.970ENSPPYG00000008244-10094.828Pongo_abelii
ENSCPBG00000009942MSI26796.970ENSPCAG00000010552MSI210092.958Procavia_capensis
ENSCPBG00000009942MSI25898.889ENSPCOG00000019195-9398.889Propithecus_coquereli
ENSCPBG00000009942MSI29583.146ENSPVAG00000017053MSI29991.549Pteropus_vampyrus
ENSCPBG00000009942MSI28993.923ENSPNYG00000018393msi2a9494.089Pundamilia_nyererei
ENSCPBG00000009942MSI29588.806ENSPNAG00000014957msi2a9496.569Pygocentrus_nattereri
ENSCPBG00000009942MSI29588.433ENSPNAG00000000844msi2b8997.268Pygocentrus_nattereri
ENSCPBG00000009942MSI29591.760ENSRNOG00000025338Msi210099.015Rattus_norvegicus
ENSCPBG00000009942MSI25898.649ENSRROG00000034421-9298.649Rhinopithecus_roxellana
ENSCPBG00000009942MSI29693.688ENSSBOG00000026425MSI210093.688Saimiri_boliviensis_boliviensis
ENSCPBG00000009942MSI29693.688ENSSHAG00000008672MSI29796.825Sarcophilus_harrisii
ENSCPBG00000009942MSI29591.209ENSSFOG00015012168msi2b10069.192Scleropages_formosus
ENSCPBG00000009942MSI29585.714ENSSFOG00015021687-9793.956Scleropages_formosus
ENSCPBG00000009942MSI28994.475ENSSMAG00000018484msi2a10087.692Scophthalmus_maximus
ENSCPBG00000009942MSI28994.475ENSSDUG00000014507msi2a10087.692Seriola_dumerili
ENSCPBG00000009942MSI29681.395ENSSDUG00000021968-8694.444Seriola_dumerili
ENSCPBG00000009942MSI28994.475ENSSLDG00000017172msi2a9394.581Seriola_lalandi_dorsalis
ENSCPBG00000009942MSI25895.876ENSSPUG00000000913-8195.876Sphenodon_punctatus
ENSCPBG00000009942MSI28994.475ENSSPAG00000017793msi2a9394.475Stegastes_partitus
ENSCPBG00000009942MSI29693.688ENSSSCG00000038505MSI29698.077Sus_scrofa
ENSCPBG00000009942MSI27192.825ENSTGUG00000008452MSI210092.825Taeniopygia_guttata
ENSCPBG00000009942MSI29585.768ENSTRUG00000021248msi2a10084.848Takifugu_rubripes
ENSCPBG00000009942MSI28184.530ENSTBEG00000001241MSI27370.588Tupaia_belangeri
ENSCPBG00000009942MSI28589.916ENSTTRG00000002189MSI29199.342Tursiops_truncatus
ENSCPBG00000009942MSI29592.045ENSUAMG00000000700MSI29799.015Ursus_americanus
ENSCPBG00000009942MSI29191.633ENSUMAG00000000505MSI210098.895Ursus_maritimus
ENSCPBG00000009942MSI27081.410ENSVPAG00000006837-6281.410Vicugna_pacos
ENSCPBG00000009942MSI29693.688ENSVVUG00000011783MSI210099.010Vulpes_vulpes
ENSCPBG00000009942MSI29683.140ENSXCOG00000006113msi2a9583.140Xiphophorus_couchianus
ENSCPBG00000009942MSI28994.475ENSXMAG00000000608msi2a9394.505Xiphophorus_maculatus

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