EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000010269 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Minus strand
Length: 4002 bases
Position: chrKK082918.1:10143875-10147876
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000013764	zf-CCCH	PF00642.24	1.2e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000016327	-	501	-	ENSCPBP00000013764	166 (aa)	-	-

Gene Model

Click here to download ENSCPBG00000010269's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000010269's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000010269	-	68	87.611	ENSCPBG00000020869	CPSF4	52	88.393

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000010269	-	100	80.723	ENSG00000160917	CPSF4	100	88.393	Homo_sapiens
ENSCPBG00000010269	-	100	80.723	ENSAMEG00000006252	CPSF4	61	81.212	Ailuropoda_melanoleuca
ENSCPBG00000010269	-	100	78.313	ENSACIG00000009248	cpsf4	68	78.788	Amphilophus_citrinellus
ENSCPBG00000010269	-	100	78.313	ENSAOCG00000019616	cpsf4	63	78.313	Amphiprion_ocellaris
ENSCPBG00000010269	-	100	78.313	ENSAPEG00000011679	cpsf4	63	78.313	Amphiprion_percula
ENSCPBG00000010269	-	100	77.711	ENSATEG00000007010	cpsf4	67	77.711	Anabas_testudineus
ENSCPBG00000010269	-	100	80.120	ENSACAG00000012941	CPSF4	55	80.606	Anolis_carolinensis
ENSCPBG00000010269	-	100	80.723	ENSANAG00000021360	CPSF4	61	81.212	Aotus_nancymaae
ENSCPBG00000010269	-	100	78.313	ENSACLG00000010374	cpsf4	74	78.313	Astatotilapia_calliptera
ENSCPBG00000010269	-	100	80.120	ENSAMXG00000031647	cpsf4	65	80.120	Astyanax_mexicanus
ENSCPBG00000010269	-	100	80.723	ENSBTAG00000002090	CPSF4	68	80.723	Bos_taurus
ENSCPBG00000010269	-	100	80.723	ENSCJAG00000015826	CPSF4	63	80.723	Callithrix_jacchus
ENSCPBG00000010269	-	100	80.723	ENSCAFG00000015036	CPSF4	100	75.449	Canis_familiaris
ENSCPBG00000010269	-	99	73.939	ENSCAFG00020014462	CPSF4	60	73.939	Canis_lupus_dingo
ENSCPBG00000010269	-	100	80.723	ENSCHIG00000014313	CPSF4	61	81.212	Capra_hircus
ENSCPBG00000010269	-	100	74.096	ENSTSYG00000014604	-	68	74.096	Carlito_syrichta
ENSCPBG00000010269	-	100	81.325	ENSTSYG00000005712	-	68	81.325	Carlito_syrichta
ENSCPBG00000010269	-	83	78.832	ENSTSYG00000008195	-	64	77.397	Carlito_syrichta
ENSCPBG00000010269	-	100	80.723	ENSCPOG00000001783	CPSF4	68	80.723	Cavia_porcellus
ENSCPBG00000010269	-	100	80.723	ENSCCAG00000028291	CPSF4	61	81.212	Cebus_capucinus
ENSCPBG00000010269	-	100	80.723	ENSCATG00000038440	CPSF4	71	80.120	Cercocebus_atys
ENSCPBG00000010269	-	100	80.723	ENSCLAG00000007050	CPSF4	61	81.212	Chinchilla_lanigera
ENSCPBG00000010269	-	100	80.723	ENSCSAG00000017795	CPSF4	61	81.212	Chlorocebus_sabaeus
ENSCPBG00000010269	-	100	65.060	ENSCING00000021080	-	63	65.060	Ciona_intestinalis
ENSCPBG00000010269	-	100	65.663	ENSCSAVG00000011469	-	57	65.663	Ciona_savignyi
ENSCPBG00000010269	-	100	80.723	ENSCANG00000019384	CPSF4	72	80.120	Colobus_angolensis_palliatus
ENSCPBG00000010269	-	100	80.723	ENSCGRG00001024184	Cpsf4	68	80.723	Cricetulus_griseus_chok1gshd
ENSCPBG00000010269	-	100	80.723	ENSCGRG00000013892	Cpsf4	61	81.212	Cricetulus_griseus_crigri
ENSCPBG00000010269	-	100	78.313	ENSCSEG00000019055	cpsf4	63	78.313	Cynoglossus_semilaevis
ENSCPBG00000010269	-	99	80.000	ENSCVAG00000016528	cpsf4	62	80.000	Cyprinodon_variegatus
ENSCPBG00000010269	-	100	79.518	ENSDARG00000020217	cpsf4	61	80.000	Danio_rerio
ENSCPBG00000010269	-	100	80.723	ENSDNOG00000006344	CPSF4	61	81.212	Dasypus_novemcinctus
ENSCPBG00000010269	-	68	87.611	ENSDORG00000000742	Cpsf4	52	88.393	Dipodomys_ordii
ENSCPBG00000010269	-	100	66.071	FBgn0015621	Clp	57	66.071	Drosophila_melanogaster
ENSCPBG00000010269	-	99	80.606	ENSETEG00000002608	CPSF4	61	80.606	Echinops_telfairi
ENSCPBG00000010269	-	100	74.096	ENSEBUG00000012552	cpsf4	69	74.096	Eptatretus_burgeri
ENSCPBG00000010269	-	100	80.723	ENSEASG00005002487	CPSF4	68	80.723	Equus_asinus_asinus
ENSCPBG00000010269	-	100	80.723	ENSECAG00000007525	CPSF4	61	81.212	Equus_caballus
ENSCPBG00000010269	-	100	79.518	ENSELUG00000011481	cpsf4	61	79.518	Esox_lucius
ENSCPBG00000010269	-	100	80.723	ENSFCAG00000015070	CPSF4	61	81.212	Felis_catus
ENSCPBG00000010269	-	100	81.325	ENSFALG00000013799	CPSF4	68	81.325	Ficedula_albicollis
ENSCPBG00000010269	-	99	60.465	ENSFALG00000012906	-	100	60.465	Ficedula_albicollis
ENSCPBG00000010269	-	84	84.173	ENSFDAG00000014092	CPSF4	57	84.783	Fukomys_damarensis
ENSCPBG00000010269	-	99	79.394	ENSFHEG00000010880	cpsf4	62	79.394	Fundulus_heteroclitus
ENSCPBG00000010269	-	100	77.976	ENSGMOG00000002330	cpsf4	65	77.976	Gadus_morhua
ENSCPBG00000010269	-	100	81.325	ENSGALG00000004714	CPSF4	68	81.325	Gallus_gallus
ENSCPBG00000010269	-	100	79.518	ENSGAFG00000010580	cpsf4	63	79.518	Gambusia_affinis
ENSCPBG00000010269	-	100	75.595	ENSGACG00000007792	cpsf4	66	75.595	Gasterosteus_aculeatus
ENSCPBG00000010269	-	99	97.576	ENSGAGG00000020579	-	92	97.576	Gopherus_agassizii
ENSCPBG00000010269	-	100	81.928	ENSGAGG00000021835	CPSF4	61	82.424	Gopherus_agassizii
ENSCPBG00000010269	-	100	80.723	ENSGGOG00000015131	CPSF4	61	81.212	Gorilla_gorilla
ENSCPBG00000010269	-	99	78.788	ENSHBUG00000013699	cpsf4	62	78.788	Haplochromis_burtoni
ENSCPBG00000010269	-	100	80.723	ENSHGLG00000017150	CPSF4	61	81.212	Heterocephalus_glaber_female
ENSCPBG00000010269	-	79	82.443	ENSHGLG00100009215	-	55	83.077	Heterocephalus_glaber_male
ENSCPBG00000010269	-	100	53.614	ENSHGLG00100017302	-	74	53.939	Heterocephalus_glaber_male
ENSCPBG00000010269	-	100	77.711	ENSHCOG00000004397	cpsf4	63	77.711	Hippocampus_comes
ENSCPBG00000010269	-	100	78.916	ENSIPUG00000017147	cpsf4	61	79.394	Ictalurus_punctatus
ENSCPBG00000010269	-	100	80.723	ENSSTOG00000001688	CPSF4	68	80.723	Ictidomys_tridecemlineatus
ENSCPBG00000010269	-	100	80.723	ENSJJAG00000019426	Cpsf4	61	81.212	Jaculus_jaculus
ENSCPBG00000010269	-	100	78.313	ENSKMAG00000015642	cpsf4	63	78.313	Kryptolebias_marmoratus
ENSCPBG00000010269	-	99	82.424	ENSLACG00000010938	CPSF4	61	82.424	Latimeria_chalumnae
ENSCPBG00000010269	-	100	81.437	ENSLACG00000018470	-	68	81.437	Latimeria_chalumnae
ENSCPBG00000010269	-	100	80.120	ENSLOCG00000004814	cpsf4	61	80.606	Lepisosteus_oculatus
ENSCPBG00000010269	-	100	80.723	ENSLAFG00000000159	CPSF4	61	81.212	Loxodonta_africana
ENSCPBG00000010269	-	100	80.723	ENSMFAG00000001462	CPSF4	72	80.120	Macaca_fascicularis
ENSCPBG00000010269	-	100	80.723	ENSMMUG00000019191	CPSF4	61	81.212	Macaca_mulatta
ENSCPBG00000010269	-	100	80.723	ENSMNEG00000032306	CPSF4	72	80.120	Macaca_nemestrina
ENSCPBG00000010269	-	100	80.723	ENSMLEG00000034721	CPSF4	71	80.120	Mandrillus_leucophaeus
ENSCPBG00000010269	-	99	78.788	ENSMAMG00000006244	cpsf4	62	78.788	Mastacembelus_armatus
ENSCPBG00000010269	-	99	78.788	ENSMZEG00005007515	cpsf4	62	78.788	Maylandia_zebra
ENSCPBG00000010269	-	80	84.091	ENSMGAG00000004235	CPSF4	63	84.091	Meleagris_gallopavo
ENSCPBG00000010269	-	100	80.723	ENSMAUG00000021253	Cpsf4	61	81.212	Mesocricetus_auratus
ENSCPBG00000010269	-	100	80.723	ENSMICG00000017429	CPSF4	61	81.212	Microcebus_murinus
ENSCPBG00000010269	-	100	80.723	ENSMOCG00000014901	Cpsf4	61	81.212	Microtus_ochrogaster
ENSCPBG00000010269	-	100	77.108	ENSMMOG00000001813	cpsf4	95	73.494	Mola_mola
ENSCPBG00000010269	-	100	81.325	ENSMODG00000001367	CPSF4	61	81.818	Monodelphis_domestica
ENSCPBG00000010269	-	100	77.711	ENSMALG00000012611	cpsf4	62	77.711	Monopterus_albus
ENSCPBG00000010269	-	100	80.723	MGP_CAROLIEiJ_G0028012	Cpsf4	64	84.962	Mus_caroli
ENSCPBG00000010269	-	100	80.723	ENSMUSG00000029625	Cpsf4	64	84.962	Mus_musculus
ENSCPBG00000010269	-	100	80.723	MGP_PahariEiJ_G0024581	Cpsf4	64	84.962	Mus_pahari
ENSCPBG00000010269	-	100	80.723	MGP_SPRETEiJ_G0029013	Cpsf4	64	84.962	Mus_spretus
ENSCPBG00000010269	-	100	80.723	ENSMPUG00000016508	CPSF4	61	81.212	Mustela_putorius_furo
ENSCPBG00000010269	-	80	84.091	ENSMLUG00000010980	CPSF4	63	84.091	Myotis_lucifugus
ENSCPBG00000010269	-	100	80.723	ENSNGAG00000001567	Cpsf4	61	81.212	Nannospalax_galili
ENSCPBG00000010269	-	83	84.058	ENSNBRG00000003943	cpsf4	56	84.058	Neolamprologus_brichardi
ENSCPBG00000010269	-	100	80.723	ENSNLEG00000011074	CPSF4	68	80.723	Nomascus_leucogenys
ENSCPBG00000010269	-	100	81.325	ENSMEUG00000006955	CPSF4	61	81.818	Notamacropus_eugenii
ENSCPBG00000010269	-	100	80.120	ENSOPRG00000013663	CPSF4	61	80.606	Ochotona_princeps
ENSCPBG00000010269	-	100	61.176	ENSODEG00000009779	-	64	61.176	Octodon_degus
ENSCPBG00000010269	-	100	80.723	ENSODEG00000011181	-	61	81.212	Octodon_degus
ENSCPBG00000010269	-	100	69.277	ENSODEG00000018283	-	60	69.277	Octodon_degus
ENSCPBG00000010269	-	99	78.788	ENSONIG00000008495	cpsf4	62	78.788	Oreochromis_niloticus
ENSCPBG00000010269	-	80	84.091	ENSOANG00000007729	CPSF4	56	84.091	Ornithorhynchus_anatinus
ENSCPBG00000010269	-	100	73.653	ENSOANG00000009568	-	59	73.653	Ornithorhynchus_anatinus
ENSCPBG00000010269	-	99	79.394	ENSORLG00000022798	cpsf4	62	79.394	Oryzias_latipes
ENSCPBG00000010269	-	99	79.394	ENSORLG00020008548	cpsf4	62	79.394	Oryzias_latipes_hni
ENSCPBG00000010269	-	99	78.788	ENSORLG00015019575	cpsf4	62	78.788	Oryzias_latipes_hsok
ENSCPBG00000010269	-	100	78.916	ENSOMEG00000005176	cpsf4	63	78.916	Oryzias_melastigma
ENSCPBG00000010269	-	100	80.723	ENSOGAG00000010884	CPSF4	61	81.212	Otolemur_garnettii
ENSCPBG00000010269	-	100	74.096	ENSOARG00000018668	CPSF4	61	74.096	Ovis_aries
ENSCPBG00000010269	-	100	80.723	ENSPPAG00000043355	CPSF4	61	81.212	Pan_paniscus
ENSCPBG00000010269	-	100	80.723	ENSPPRG00000003134	CPSF4	61	81.212	Panthera_pardus
ENSCPBG00000010269	-	84	85.612	ENSPTIG00000005604	CPSF4	51	86.232	Panthera_tigris_altaica
ENSCPBG00000010269	-	100	80.723	ENSPTRG00000019453	CPSF4	61	81.212	Pan_troglodytes
ENSCPBG00000010269	-	100	80.723	ENSPANG00000023123	CPSF4	72	80.120	Papio_anubis
ENSCPBG00000010269	-	99	79.394	ENSPKIG00000014278	cpsf4	60	79.394	Paramormyrops_kingsleyae
ENSCPBG00000010269	-	68	87.611	ENSPSIG00000011229	CPSF4	52	88.393	Pelodiscus_sinensis
ENSCPBG00000010269	-	69	92.174	ENSPSIG00000018198	-	60	92.174	Pelodiscus_sinensis
ENSCPBG00000010269	-	100	71.687	ENSPMGG00000017735	cpsf4	69	71.687	Periophthalmus_magnuspinnatus
ENSCPBG00000010269	-	100	80.723	ENSPEMG00000004508	Cpsf4	61	81.212	Peromyscus_maniculatus_bairdii
ENSCPBG00000010269	-	100	81.325	ENSPCIG00000024776	CPSF4	61	81.818	Phascolarctos_cinereus
ENSCPBG00000010269	-	100	79.518	ENSPFOG00000014912	cpsf4	63	79.518	Poecilia_formosa
ENSCPBG00000010269	-	100	80.120	ENSPLAG00000009599	cpsf4	67	80.120	Poecilia_latipinna
ENSCPBG00000010269	-	100	79.518	ENSPMEG00000009790	cpsf4	63	79.518	Poecilia_mexicana
ENSCPBG00000010269	-	100	79.518	ENSPREG00000018166	cpsf4	63	79.518	Poecilia_reticulata
ENSCPBG00000010269	-	79	83.969	ENSPPYG00000017378	CPSF4	55	84.615	Pongo_abelii
ENSCPBG00000010269	-	99	80.606	ENSPCAG00000001892	CPSF4	61	80.606	Procavia_capensis
ENSCPBG00000010269	-	100	80.723	ENSPCOG00000012771	CPSF4	61	81.212	Propithecus_coquereli
ENSCPBG00000010269	-	99	73.333	ENSPVAG00000007531	CPSF4	61	73.333	Pteropus_vampyrus
ENSCPBG00000010269	-	99	78.788	ENSPNYG00000018559	cpsf4	62	78.788	Pundamilia_nyererei
ENSCPBG00000010269	-	100	80.120	ENSPNAG00000003736	cpsf4	61	80.606	Pygocentrus_nattereri
ENSCPBG00000010269	-	100	80.723	ENSRNOG00000000985	Cpsf4	68	80.723	Rattus_norvegicus
ENSCPBG00000010269	-	79	84.733	ENSRBIG00000033886	CPSF4	56	85.385	Rhinopithecus_bieti
ENSCPBG00000010269	-	100	80.723	ENSRROG00000040431	CPSF4	68	80.723	Rhinopithecus_roxellana
ENSCPBG00000010269	-	100	80.723	ENSSBOG00000020493	CPSF4	59	87.611	Saimiri_boliviensis_boliviensis
ENSCPBG00000010269	-	100	81.325	ENSSHAG00000011533	CPSF4	61	81.818	Sarcophilus_harrisii
ENSCPBG00000010269	-	99	80.000	ENSSFOG00015007883	cpsf4	60	80.000	Scleropages_formosus
ENSCPBG00000010269	-	100	77.108	ENSSMAG00000006374	cpsf4	68	77.108	Scophthalmus_maximus
ENSCPBG00000010269	-	99	78.788	ENSSDUG00000018887	cpsf4	62	78.788	Seriola_dumerili
ENSCPBG00000010269	-	99	78.788	ENSSLDG00000019078	cpsf4	62	78.788	Seriola_lalandi_dorsalis
ENSCPBG00000010269	-	79	84.733	ENSSARG00000012416	CPSF4	56	85.385	Sorex_araneus
ENSCPBG00000010269	-	100	84.337	ENSSPUG00000014803	-	74	84.337	Sphenodon_punctatus
ENSCPBG00000010269	-	99	81.818	ENSSPUG00000003549	CPSF4	61	81.818	Sphenodon_punctatus
ENSCPBG00000010269	-	100	78.313	ENSSPAG00000006174	cpsf4	69	78.313	Stegastes_partitus
ENSCPBG00000010269	-	100	80.723	ENSSSCG00000026896	CPSF4	68	80.723	Sus_scrofa
ENSCPBG00000010269	-	100	80.357	ENSTGUG00000007552	CPSF4	69	80.357	Taeniopygia_guttata
ENSCPBG00000010269	-	100	77.108	ENSTRUG00000024220	cpsf4	63	77.108	Takifugu_rubripes
ENSCPBG00000010269	-	100	77.108	ENSTNIG00000006265	cpsf4	63	77.108	Tetraodon_nigroviridis
ENSCPBG00000010269	-	78	79.231	ENSTBEG00000011406	CPSF4	55	79.231	Tupaia_belangeri
ENSCPBG00000010269	-	100	80.723	ENSTTRG00000003007	CPSF4	62	80.723	Tursiops_truncatus
ENSCPBG00000010269	-	100	80.723	ENSUAMG00000008051	CPSF4	64	80.723	Ursus_americanus
ENSCPBG00000010269	-	100	80.723	ENSUMAG00000009474	CPSF4	68	80.723	Ursus_maritimus
ENSCPBG00000010269	-	100	80.723	ENSVVUG00000008824	CPSF4	68	80.723	Vulpes_vulpes
ENSCPBG00000010269	-	100	76.136	ENSXETG00000009892	cpsf4	63	76.571	Xenopus_tropicalis
ENSCPBG00000010269	-	100	78.313	ENSXETG00000004641	cpsf4l	62	78.313	Xenopus_tropicalis
ENSCPBG00000010269	-	100	79.518	ENSXCOG00000016040	cpsf4	63	79.518	Xiphophorus_couchianus
ENSCPBG00000010269	-	100	79.518	ENSXMAG00000024670	cpsf4	63	79.518	Xiphophorus_maculatus