EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPBG00000010310 (Gene tree)
Gene ID: 101936038
Gene Symbol: RRP1B
Alias: KIAA0179|Nnp1|PPP1R136|RRP1
Full Name: ribosomal RNA processing 1B
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Plus strand
Length: 30601 bases
Position: chrKK083046.1:2240608-2271208
Accession: 23818
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000013826	Nop52	PF05997.12	1.2e-73	1	1
ENSCPBP00000013821	Nop52	PF05997.12	1.4e-73	1	1
ENSCPBP00000013829	Nop52	PF05997.12	1e-63	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000016400	RRP1B-202	3457	-	ENSCPBP00000013826	795 (aa)	-	-
ENSCPBT00000016404	RRP1B-203	2823	-	ENSCPBP00000013829	724 (aa)	-	UPI00038911FB
ENSCPBT00000016395	RRP1B-201	3216	-	ENSCPBP00000013821	835 (aa)	XP_005306877	UPI00046C2DF4

Gene Model

Click here to download ENSCPBG00000010310's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000010310's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000010310	RRP1B	98	51.967	ENSG00000160208	RRP1B	99	52.842	Homo_sapiens
ENSCPBG00000010310	RRP1B	64	51.821	ENSAPOG00000007490	-	54	51.695	Acanthochromis_polyacanthus
ENSCPBG00000010310	RRP1B	65	63.068	ENSAMEG00000011401	RRP1B	66	63.920	Ailuropoda_melanoleuca
ENSCPBG00000010310	RRP1B	58	51.541	ENSAOCG00000017894	-	99	54.737	Amphiprion_ocellaris
ENSCPBG00000010310	RRP1B	64	51.261	ENSAPEG00000024150	-	57	51.667	Amphiprion_percula
ENSCPBG00000010310	RRP1B	98	67.549	ENSAPLG00000004310	RRP1B	100	66.899	Anas_platyrhynchos
ENSCPBG00000010310	RRP1B	99	55.967	ENSACAG00000017851	RRP1B	95	58.621	Anolis_carolinensis
ENSCPBG00000010310	RRP1B	98	50.204	ENSANAG00000034889	RRP1B	99	51.226	Aotus_nancymaae
ENSCPBG00000010310	RRP1B	98	47.188	ENSBTAG00000017418	RRP1B	99	48.966	Bos_taurus
ENSCPBG00000010310	RRP1B	98	49.795	ENSCJAG00000017077	RRP1B	99	51.166	Callithrix_jacchus
ENSCPBG00000010310	RRP1B	54	51.613	ENSCAFG00000010646	RRP1	80	53.947	Canis_familiaris
ENSCPBG00000010310	RRP1B	98	49.171	ENSCAFG00000010621	RRP1B	99	49.864	Canis_familiaris
ENSCPBG00000010310	RRP1B	54	51.613	ENSCAFG00020018979	RRP1	74	58.892	Canis_lupus_dingo
ENSCPBG00000010310	RRP1B	98	48.209	ENSCAFG00020018901	RRP1B	74	64.624	Canis_lupus_dingo
ENSCPBG00000010310	RRP1B	98	48.693	ENSCHIG00000021519	RRP1B	99	49.545	Capra_hircus
ENSCPBG00000010310	RRP1B	98	46.164	ENSCPOG00000002396	RRP1B	99	47.066	Cavia_porcellus
ENSCPBG00000010310	RRP1B	98	50.475	ENSCCAG00000029384	RRP1B	99	51.675	Cebus_capucinus
ENSCPBG00000010310	RRP1B	98	51.626	ENSCATG00000017423	RRP1B	99	52.767	Cercocebus_atys
ENSCPBG00000010310	RRP1B	50	50.990	ENSCLAG00000011639	RRP1	75	56.851	Chinchilla_lanigera
ENSCPBG00000010310	RRP1B	98	46.224	ENSCLAG00000005622	RRP1B	99	46.314	Chinchilla_lanigera
ENSCPBG00000010310	RRP1B	98	51.897	ENSCSAG00000007961	RRP1B	99	52.577	Chlorocebus_sabaeus
ENSCPBG00000010310	RRP1B	54	34.483	ENSCING00000003304	-	75	37.464	Ciona_intestinalis
ENSCPBG00000010310	RRP1B	98	51.355	ENSCANG00000040952	RRP1B	99	52.381	Colobus_angolensis_palliatus
ENSCPBG00000010310	RRP1B	98	47.755	ENSCGRG00001010889	-	99	47.545	Cricetulus_griseus_chok1gshd
ENSCPBG00000010310	RRP1B	98	47.755	ENSCGRG00001023882	-	99	47.545	Cricetulus_griseus_chok1gshd
ENSCPBG00000010310	RRP1B	98	47.755	ENSCGRG00000001553	Rrp1b	99	45.872	Cricetulus_griseus_crigri
ENSCPBG00000010310	RRP1B	55	55.056	ENSCSEG00000020711	-	76	55.085	Cynoglossus_semilaevis
ENSCPBG00000010310	RRP1B	83	54.787	ENSDNOG00000032774	RRP1B	71	65.193	Dasypus_novemcinctus
ENSCPBG00000010310	RRP1B	56	51.902	ENSDNOG00000019880	RRP1	75	60.896	Dasypus_novemcinctus
ENSCPBG00000010310	RRP1B	98	43.666	ENSETEG00000019489	RRP1B	87	70.930	Echinops_telfairi
ENSCPBG00000010310	RRP1B	52	51.765	ENSEASG00005001673	RRP1	77	60.117	Equus_asinus_asinus
ENSCPBG00000010310	RRP1B	98	50.889	ENSEASG00005001687	RRP1B	99	51.871	Equus_asinus_asinus
ENSCPBG00000010310	RRP1B	98	50.822	ENSECAG00000018018	RRP1B	99	51.871	Equus_caballus
ENSCPBG00000010310	RRP1B	52	52.471	ENSECAG00000015703	RRP1	77	60.997	Equus_caballus
ENSCPBG00000010310	RRP1B	60	57.377	ENSELUG00000015885	-	88	52.632	Esox_lucius
ENSCPBG00000010310	RRP1B	73	60.000	ENSFCAG00000010272	RRP1B	73	63.231	Felis_catus
ENSCPBG00000010310	RRP1B	96	63.845	ENSFALG00000002024	RRP1B	100	63.128	Ficedula_albicollis
ENSCPBG00000010310	RRP1B	52	52.758	ENSFDAG00000013728	RRP1	75	59.701	Fukomys_damarensis
ENSCPBG00000010310	RRP1B	99	46.566	ENSFDAG00000010899	RRP1B	96	46.477	Fukomys_damarensis
ENSCPBG00000010310	RRP1B	62	48.725	ENSFHEG00000016314	-	51	49.697	Fundulus_heteroclitus
ENSCPBG00000010310	RRP1B	60	51.818	ENSGMOG00000001953	-	66	51.818	Gadus_morhua
ENSCPBG00000010310	RRP1B	98	65.508	ENSGALG00000035696	RRP1B	99	66.623	Gallus_gallus
ENSCPBG00000010310	RRP1B	99	37.769	ENSGACG00000001438	rrp1	77	52.273	Gasterosteus_aculeatus
ENSCPBG00000010310	RRP1B	98	95.512	ENSGAGG00000000375	RRP1B	99	95.739	Gopherus_agassizii
ENSCPBG00000010310	RRP1B	98	51.832	ENSGGOG00000012069	RRP1B	99	52.713	Gorilla_gorilla
ENSCPBG00000010310	RRP1B	74	54.187	ENSHGLG00100002232	RRP1B	81	55.663	Heterocephalus_glaber_male
ENSCPBG00000010310	RRP1B	57	49.107	ENSIPUG00000000673	-	71	47.043	Ictalurus_punctatus
ENSCPBG00000010310	RRP1B	98	47.123	ENSSTOG00000011790	RRP1B	96	49.481	Ictidomys_tridecemlineatus
ENSCPBG00000010310	RRP1B	51	55.037	ENSSTOG00000011116	RRP1	76	61.377	Ictidomys_tridecemlineatus
ENSCPBG00000010310	RRP1B	98	42.276	ENSJJAG00000021279	Rrp1b	99	44.015	Jaculus_jaculus
ENSCPBG00000010310	RRP1B	61	51.429	ENSKMAG00000005539	rrp1	80	52.291	Kryptolebias_marmoratus
ENSCPBG00000010310	RRP1B	99	46.676	ENSLACG00000017332	-	99	46.461	Latimeria_chalumnae
ENSCPBG00000010310	RRP1B	58	58.252	ENSLOCG00000004064	-	64	57.224	Lepisosteus_oculatus
ENSCPBG00000010310	RRP1B	92	45.180	ENSLAFG00000000766	RRP1B	85	66.205	Loxodonta_africana
ENSCPBG00000010310	RRP1B	98	50.882	ENSMFAG00000039152	RRP1B	99	52.062	Macaca_fascicularis
ENSCPBG00000010310	RRP1B	98	49.524	ENSMMUG00000000104	RRP1B	99	50.775	Macaca_mulatta
ENSCPBG00000010310	RRP1B	98	51.153	ENSMNEG00000034269	RRP1B	99	52.320	Macaca_nemestrina
ENSCPBG00000010310	RRP1B	50	53.784	ENSMLEG00000037797	RRP1	73	58.521	Mandrillus_leucophaeus
ENSCPBG00000010310	RRP1B	98	51.491	ENSMLEG00000040044	RRP1B	99	51.762	Mandrillus_leucophaeus
ENSCPBG00000010310	RRP1B	98	65.369	ENSMGAG00000014591	RRP1B	99	66.623	Meleagris_gallopavo
ENSCPBG00000010310	RRP1B	98	50.607	ENSMICG00000004686	RRP1B	99	50.837	Microcebus_murinus
ENSCPBG00000010310	RRP1B	50	55.831	ENSMICG00000004700	RRP1	78	59.942	Microcebus_murinus
ENSCPBG00000010310	RRP1B	99	56.480	ENSMODG00000021033	RRP1B	99	57.752	Monodelphis_domestica
ENSCPBG00000010310	RRP1B	56	50.947	ENSMODG00000021036	-	51	63.127	Monodelphis_domestica
ENSCPBG00000010310	RRP1B	52	59.813	MGP_CAROLIEiJ_G0015508	Rrp1	80	49.873	Mus_caroli
ENSCPBG00000010310	RRP1B	98	46.217	MGP_CAROLIEiJ_G0021376	Rrp1b	99	47.074	Mus_caroli
ENSCPBG00000010310	RRP1B	98	44.643	ENSMUSG00000058392	Rrp1b	99	45.514	Mus_musculus
ENSCPBG00000010310	RRP1B	98	46.006	MGP_PahariEiJ_G0023695	Rrp1b	99	45.964	Mus_pahari
ENSCPBG00000010310	RRP1B	52	59.813	MGP_SPRETEiJ_G0016321	Rrp1	80	49.367	Mus_spretus
ENSCPBG00000010310	RRP1B	88	45.455	ENSMPUG00000009810	RRP1B	99	45.763	Mustela_putorius_furo
ENSCPBG00000010310	RRP1B	98	50.616	ENSMLUG00000007738	RRP1B	99	51.809	Myotis_lucifugus
ENSCPBG00000010310	RRP1B	98	46.016	ENSNGAG00000021073	Rrp1b	99	47.066	Nannospalax_galili
ENSCPBG00000010310	RRP1B	98	50.822	ENSNLEG00000001490	RRP1B	99	50.518	Nomascus_leucogenys
ENSCPBG00000010310	RRP1B	75	84.615	ENSMEUG00000003226	-	89	80.870	Notamacropus_eugenii
ENSCPBG00000010310	RRP1B	99	50.954	ENSOANG00000006470	RRP1B	99	51.910	Ornithorhynchus_anatinus
ENSCPBG00000010310	RRP1B	98	41.192	ENSOCUG00000025931	RRP1B	92	54.698	Oryctolagus_cuniculus
ENSCPBG00000010310	RRP1B	65	51.368	ENSORLG00020007199	-	62	52.646	Oryzias_latipes_hni
ENSCPBG00000010310	RRP1B	65	51.682	ENSORLG00015004425	-	62	52.925	Oryzias_latipes_hsok
ENSCPBG00000010310	RRP1B	65	49.580	ENSOMEG00000016910	-	58	52.632	Oryzias_melastigma
ENSCPBG00000010310	RRP1B	64	64.371	ENSOGAG00000009872	RRP1B	74	66.000	Otolemur_garnettii
ENSCPBG00000010310	RRP1B	98	47.802	ENSOARG00000011314	RRP1B	100	47.606	Ovis_aries
ENSCPBG00000010310	RRP1B	99	51.687	ENSPPAG00000035319	RRP1B	99	51.421	Pan_paniscus
ENSCPBG00000010310	RRP1B	50	47.397	ENSPTIG00000019473	RRP1	73	52.632	Panthera_tigris_altaica
ENSCPBG00000010310	RRP1B	64	62.500	ENSPTIG00000016894	RRP1B	78	62.500	Panthera_tigris_altaica
ENSCPBG00000010310	RRP1B	98	51.973	ENSPTRG00000013958	RRP1B	99	52.375	Pan_troglodytes
ENSCPBG00000010310	RRP1B	98	51.355	ENSPANG00000011090	RRP1B	99	52.638	Papio_anubis
ENSCPBG00000010310	RRP1B	100	88.154	ENSPSIG00000008152	RRP1B	100	89.210	Pelodiscus_sinensis
ENSCPBG00000010310	RRP1B	98	46.355	ENSPEMG00000022490	Rrp1b	99	47.128	Peromyscus_maniculatus_bairdii
ENSCPBG00000010310	RRP1B	50	48.700	ENSPEMG00000018421	Rrp1	77	59.357	Peromyscus_maniculatus_bairdii
ENSCPBG00000010310	RRP1B	68	47.140	ENSPCIG00000015523	-	74	62.899	Phascolarctos_cinereus
ENSCPBG00000010310	RRP1B	99	57.026	ENSPCIG00000015513	RRP1B	99	58.559	Phascolarctos_cinereus
ENSCPBG00000010310	RRP1B	50	50.123	ENSPLAG00000016684	-	51	53.186	Poecilia_latipinna
ENSCPBG00000010310	RRP1B	70	47.696	ENSPREG00000015673	-	62	51.524	Poecilia_reticulata
ENSCPBG00000010310	RRP1B	98	51.837	ENSPPYG00000011470	RRP1B	99	52.842	Pongo_abelii
ENSCPBG00000010310	RRP1B	89	82.105	ENSPCAG00000013723	RRP1B	91	82.105	Procavia_capensis
ENSCPBG00000010310	RRP1B	98	49.659	ENSPCOG00000017927	RRP1B	99	49.936	Propithecus_coquereli
ENSCPBG00000010310	RRP1B	98	44.415	ENSPVAG00000001436	RRP1B	94	44.399	Pteropus_vampyrus
ENSCPBG00000010310	RRP1B	59	48.913	ENSPNAG00000007718	-	50	50.284	Pygocentrus_nattereri
ENSCPBG00000010310	RRP1B	98	46.008	ENSRNOG00000001194	Rrp1b	99	46.718	Rattus_norvegicus
ENSCPBG00000010310	RRP1B	98	47.425	ENSRBIG00000041689	RRP1B	99	48.777	Rhinopithecus_bieti
ENSCPBG00000010310	RRP1B	98	51.626	ENSRROG00000031499	RRP1B	99	52.767	Rhinopithecus_roxellana
ENSCPBG00000010310	RRP1B	98	48.947	ENSSBOG00000034727	RRP1B	99	48.617	Saimiri_boliviensis_boliviensis
ENSCPBG00000010310	RRP1B	99	57.259	ENSSHAG00000017789	RRP1B	99	58.483	Sarcophilus_harrisii
ENSCPBG00000010310	RRP1B	60	50.151	ENSSMAG00000016847	-	86	49.861	Scophthalmus_maximus
ENSCPBG00000010310	RRP1B	67	51.952	ENSSDUG00000000551	-	60	52.989	Seriola_dumerili
ENSCPBG00000010310	RRP1B	60	50.904	ENSSLDG00000002538	-	60	52.044	Seriola_lalandi_dorsalis
ENSCPBG00000010310	RRP1B	69	57.706	ENSSARG00000003108	-	75	57.706	Sorex_araneus
ENSCPBG00000010310	RRP1B	98	63.064	ENSSPUG00000002834	RRP1B	99	64.062	Sphenodon_punctatus
ENSCPBG00000010310	RRP1B	61	50.262	ENSSPAG00000005370	-	52	50.667	Stegastes_partitus
ENSCPBG00000010310	RRP1B	99	44.567	ENSSSCG00000021698	RRP1B	99	45.584	Sus_scrofa
ENSCPBG00000010310	RRP1B	98	63.966	ENSTGUG00000005926	RRP1B	100	64.106	Taeniopygia_guttata
ENSCPBG00000010310	RRP1B	64	47.632	ENSTNIG00000005053	rrp1	71	53.352	Tetraodon_nigroviridis
ENSCPBG00000010310	RRP1B	74	60.822	ENSTBEG00000000422	RRP1B	87	64.286	Tupaia_belangeri
ENSCPBG00000010310	RRP1B	98	45.890	ENSTTRG00000000723	RRP1B	99	48.755	Tursiops_truncatus
ENSCPBG00000010310	RRP1B	78	59.950	ENSUAMG00000026765	RRP1B	99	49.344	Ursus_americanus
ENSCPBG00000010310	RRP1B	64	63.881	ENSUMAG00000025510	RRP1B	88	63.863	Ursus_maritimus
ENSCPBG00000010310	RRP1B	98	49.044	ENSVVUG00000024509	RRP1B	99	50.000	Vulpes_vulpes
ENSCPBG00000010310	RRP1B	71	47.525	ENSXETG00000013683	rrp1b	71	56.037	Xenopus_tropicalis
ENSCPBG00000010310	RRP1B	63	51.075	ENSXMAG00000023123	-	63	51.771	Xiphophorus_maculatus