EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000010771 (Gene tree)
Gene ID: 101952282
Gene Symbol: LARP6
Alias: FLJ11196|acheron
Full Name: La ribonucleoprotein domain family member 6
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Plus strand
Length: 17524 bases
Position: chrKK088223.1:4602574-4620097
Accession: 24012
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000014472	La	PF05383.17	6e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000017185	LARP6-201	2227	XM_005284969	ENSCPBP00000014472	513 (aa)	XP_005285026	UPI000388DBA8

Gene Model

Click here to download ENSCPBG00000010771's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000010771's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000010771	LARP6	80	43.091	ENSCPBG00000011144	-	88	41.860

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000010771	LARP6	84	70.320	ENSG00000166173	LARP6	89	70.023	Homo_sapiens
ENSCPBG00000010771	LARP6	88	60.000	ENSAPOG00000021773	larp6a	63	61.765	Acanthochromis_polyacanthus
ENSCPBG00000010771	LARP6	81	71.122	ENSAMEG00000008897	LARP6	98	71.122	Ailuropoda_melanoleuca
ENSCPBG00000010771	LARP6	90	60.460	ENSACIG00000005166	larp6a	87	62.222	Amphilophus_citrinellus
ENSCPBG00000010771	LARP6	88	60.000	ENSAOCG00000002284	larp6a	63	61.765	Amphiprion_ocellaris
ENSCPBG00000010771	LARP6	88	60.000	ENSAPEG00000008077	larp6a	84	61.765	Amphiprion_percula
ENSCPBG00000010771	LARP6	88	60.851	ENSATEG00000004018	larp6a	62	62.670	Anabas_testudineus
ENSCPBG00000010771	LARP6	82	83.019	ENSAPLG00000009914	LARP6	100	83.019	Anas_platyrhynchos
ENSCPBG00000010771	LARP6	82	72.066	ENSACAG00000008613	LARP6	100	71.831	Anolis_carolinensis
ENSCPBG00000010771	LARP6	84	70.548	ENSANAG00000024860	LARP6	89	70.252	Aotus_nancymaae
ENSCPBG00000010771	LARP6	90	60.460	ENSACLG00000018561	larp6a	62	62.222	Astatotilapia_calliptera
ENSCPBG00000010771	LARP6	81	41.866	ENSAMXG00000036816	-	95	41.388	Astyanax_mexicanus
ENSCPBG00000010771	LARP6	85	59.031	ENSAMXG00000029387	larp6a	68	59.471	Astyanax_mexicanus
ENSCPBG00000010771	LARP6	84	69.565	ENSBTAG00000003915	LARP6	89	69.565	Bos_taurus
ENSCPBG00000010771	LARP6	90	66.458	ENSCJAG00000046236	-	88	69.838	Callithrix_jacchus
ENSCPBG00000010771	LARP6	83	70.602	ENSCJAG00000018642	-	88	70.602	Callithrix_jacchus
ENSCPBG00000010771	LARP6	81	71.838	ENSCAFG00000017616	LARP6	98	71.838	Canis_familiaris
ENSCPBG00000010771	LARP6	84	70.252	ENSCAFG00020007296	LARP6	89	70.252	Canis_lupus_dingo
ENSCPBG00000010771	LARP6	84	69.336	ENSCHIG00000013742	LARP6	89	69.336	Capra_hircus
ENSCPBG00000010771	LARP6	81	70.883	ENSTSYG00000028124	LARP6	86	70.883	Carlito_syrichta
ENSCPBG00000010771	LARP6	81	71.360	ENSCAPG00000015452	LARP6	99	71.360	Cavia_aperea
ENSCPBG00000010771	LARP6	89	66.667	ENSCPOG00000022687	LARP6	89	70.183	Cavia_porcellus
ENSCPBG00000010771	LARP6	84	70.776	ENSCCAG00000036320	LARP6	89	70.776	Cebus_capucinus
ENSCPBG00000010771	LARP6	84	70.320	ENSCATG00000042432	LARP6	89	70.023	Cercocebus_atys
ENSCPBG00000010771	LARP6	84	70.938	ENSCLAG00000007893	LARP6	89	70.938	Chinchilla_lanigera
ENSCPBG00000010771	LARP6	84	70.320	ENSCSAG00000013672	LARP6	89	70.023	Chlorocebus_sabaeus
ENSCPBG00000010771	LARP6	85	69.794	ENSCHOG00000003318	LARP6	92	69.794	Choloepus_hoffmanni
ENSCPBG00000010771	LARP6	81	71.599	ENSCANG00000025833	LARP6	99	71.599	Colobus_angolensis_palliatus
ENSCPBG00000010771	LARP6	84	69.794	ENSCGRG00001024472	Larp6	89	69.794	Cricetulus_griseus_chok1gshd
ENSCPBG00000010771	LARP6	84	69.794	ENSCGRG00000004527	Larp6	89	69.794	Cricetulus_griseus_crigri
ENSCPBG00000010771	LARP6	88	60.128	ENSCSEG00000011196	larp6a	69	60.128	Cynoglossus_semilaevis
ENSCPBG00000010771	LARP6	88	60.851	ENSCVAG00000009605	larp6a	69	60.851	Cyprinodon_variegatus
ENSCPBG00000010771	LARP6	88	60.768	ENSDARG00000005355	larp6a	96	62.945	Danio_rerio
ENSCPBG00000010771	LARP6	84	69.725	ENSDNOG00000042993	LARP6	89	69.725	Dasypus_novemcinctus
ENSCPBG00000010771	LARP6	89	63.291	ENSDORG00000023910	Larp6	90	65.909	Dipodomys_ordii
ENSCPBG00000010771	LARP6	64	70.476	ENSETEG00000020390	LARP6	68	70.476	Echinops_telfairi
ENSCPBG00000010771	LARP6	84	69.108	ENSEASG00005005490	LARP6	65	69.108	Equus_asinus_asinus
ENSCPBG00000010771	LARP6	84	69.108	ENSECAG00000014190	LARP6	98	68.100	Equus_caballus
ENSCPBG00000010771	LARP6	83	62.387	ENSELUG00000007341	larp6a	64	62.387	Esox_lucius
ENSCPBG00000010771	LARP6	84	69.406	ENSFCAG00000001361	LARP6	89	69.108	Felis_catus
ENSCPBG00000010771	LARP6	85	80.587	ENSFALG00000012389	LARP6	96	80.000	Ficedula_albicollis
ENSCPBG00000010771	LARP6	81	72.792	ENSFDAG00000019994	LARP6	82	72.792	Fukomys_damarensis
ENSCPBG00000010771	LARP6	88	60.426	ENSFHEG00000010312	larp6a	67	60.426	Fundulus_heteroclitus
ENSCPBG00000010771	LARP6	94	78.323	ENSGALG00000004046	LARP6	99	77.710	Gallus_gallus
ENSCPBG00000010771	LARP6	88	60.510	ENSGAFG00000009426	larp6a	67	60.510	Gambusia_affinis
ENSCPBG00000010771	LARP6	80	60.748	ENSGACG00000014622	larp6a	96	60.748	Gasterosteus_aculeatus
ENSCPBG00000010771	LARP6	91	93.617	ENSGAGG00000010802	LARP6	70	93.404	Gopherus_agassizii
ENSCPBG00000010771	LARP6	81	71.599	ENSGGOG00000024151	LARP6	99	71.599	Gorilla_gorilla
ENSCPBG00000010771	LARP6	90	60.460	ENSHBUG00000021014	larp6a	62	62.222	Haplochromis_burtoni
ENSCPBG00000010771	LARP6	84	71.071	ENSHGLG00000015112	LARP6	89	70.843	Heterocephalus_glaber_female
ENSCPBG00000010771	LARP6	81	72.792	ENSHGLG00100013159	LARP6	99	72.792	Heterocephalus_glaber_male
ENSCPBG00000010771	LARP6	90	59.244	ENSHCOG00000001241	larp6a	91	59.454	Hippocampus_comes
ENSCPBG00000010771	LARP6	82	60.045	ENSIPUG00000010187	larp6	67	60.497	Ictalurus_punctatus
ENSCPBG00000010771	LARP6	84	37.923	ENSIPUG00000002828	-	94	38.018	Ictalurus_punctatus
ENSCPBG00000010771	LARP6	84	70.709	ENSSTOG00000024279	LARP6	95	70.709	Ictidomys_tridecemlineatus
ENSCPBG00000010771	LARP6	93	64.228	ENSJJAG00000011013	Larp6	90	69.495	Jaculus_jaculus
ENSCPBG00000010771	LARP6	83	62.132	ENSKMAG00000001702	larp6a	60	61.678	Kryptolebias_marmoratus
ENSCPBG00000010771	LARP6	88	58.298	ENSLBEG00000000170	larp6a	89	58.298	Labrus_bergylta
ENSCPBG00000010771	LARP6	81	43.218	ENSLACG00000002786	-	98	44.340	Latimeria_chalumnae
ENSCPBG00000010771	LARP6	99	68.391	ENSLACG00000018706	LARP6	99	67.946	Latimeria_chalumnae
ENSCPBG00000010771	LARP6	90	60.714	ENSLOCG00000014592	larp6a	66	62.361	Lepisosteus_oculatus
ENSCPBG00000010771	LARP6	81	44.626	ENSLOCG00000008547	-	82	42.991	Lepisosteus_oculatus
ENSCPBG00000010771	LARP6	84	71.167	ENSLAFG00000016343	LARP6	98	71.167	Loxodonta_africana
ENSCPBG00000010771	LARP6	84	70.320	ENSMFAG00000035507	LARP6	97	70.320	Macaca_fascicularis
ENSCPBG00000010771	LARP6	84	70.320	ENSMMUG00000004429	LARP6	91	70.320	Macaca_mulatta
ENSCPBG00000010771	LARP6	84	70.320	ENSMNEG00000045335	LARP6	89	70.023	Macaca_nemestrina
ENSCPBG00000010771	LARP6	81	71.599	ENSMLEG00000038587	LARP6	99	71.599	Mandrillus_leucophaeus
ENSCPBG00000010771	LARP6	88	61.064	ENSMAMG00000005261	larp6a	67	61.064	Mastacembelus_armatus
ENSCPBG00000010771	LARP6	90	60.460	ENSMZEG00005005774	larp6a	62	62.222	Maylandia_zebra
ENSCPBG00000010771	LARP6	82	83.215	ENSMGAG00000005077	LARP6	100	83.215	Meleagris_gallopavo
ENSCPBG00000010771	LARP6	84	70.023	ENSMAUG00000018486	Larp6	89	70.023	Mesocricetus_auratus
ENSCPBG00000010771	LARP6	84	70.276	ENSMICG00000011234	LARP6	90	69.683	Microcebus_murinus
ENSCPBG00000010771	LARP6	84	69.336	ENSMOCG00000010492	Larp6	89	69.336	Microtus_ochrogaster
ENSCPBG00000010771	LARP6	88	60.981	ENSMMOG00000016284	larp6a	86	62.812	Mola_mola
ENSCPBG00000010771	LARP6	84	69.954	ENSMODG00000009034	LARP6	85	69.954	Monodelphis_domestica
ENSCPBG00000010771	LARP6	88	60.426	ENSMALG00000014439	larp6a	89	60.426	Monopterus_albus
ENSCPBG00000010771	LARP6	84	70.252	MGP_CAROLIEiJ_G0032314	Larp6	89	70.252	Mus_caroli
ENSCPBG00000010771	LARP6	84	70.252	ENSMUSG00000034839	Larp6	89	70.252	Mus_musculus
ENSCPBG00000010771	LARP6	84	70.709	MGP_PahariEiJ_G0015180	Larp6	89	70.709	Mus_pahari
ENSCPBG00000010771	LARP6	84	69.794	MGP_SPRETEiJ_G0033452	Larp6	89	69.794	Mus_spretus
ENSCPBG00000010771	LARP6	81	70.883	ENSMPUG00000017086	LARP6	98	70.883	Mustela_putorius_furo
ENSCPBG00000010771	LARP6	84	69.863	ENSMLUG00000010319	LARP6	89	69.565	Myotis_lucifugus
ENSCPBG00000010771	LARP6	84	69.108	ENSNGAG00000014238	Larp6	89	69.108	Nannospalax_galili
ENSCPBG00000010771	LARP6	90	60.669	ENSNBRG00000008120	larp6a	86	62.444	Neolamprologus_brichardi
ENSCPBG00000010771	LARP6	84	70.320	ENSNLEG00000013691	LARP6	89	70.023	Nomascus_leucogenys
ENSCPBG00000010771	LARP6	72	70.000	ENSMEUG00000002270	LARP6	75	70.492	Notamacropus_eugenii
ENSCPBG00000010771	LARP6	68	63.636	ENSOPRG00000004868	-	99	63.533	Ochotona_princeps
ENSCPBG00000010771	LARP6	84	69.816	ENSODEG00000015958	LARP6	88	69.816	Octodon_degus
ENSCPBG00000010771	LARP6	88	60.593	ENSONIG00000002901	larp6a	84	62.387	Oreochromis_niloticus
ENSCPBG00000010771	LARP6	82	63.895	ENSOCUG00000009306	LARP6	99	63.895	Oryctolagus_cuniculus
ENSCPBG00000010771	LARP6	88	61.017	ENSORLG00000014256	larp6a	87	62.528	Oryzias_latipes
ENSCPBG00000010771	LARP6	88	61.017	ENSORLG00020019657	larp6a	63	62.528	Oryzias_latipes_hni
ENSCPBG00000010771	LARP6	88	61.229	ENSORLG00015017915	larp6a	63	62.754	Oryzias_latipes_hsok
ENSCPBG00000010771	LARP6	88	61.017	ENSOMEG00000017049	larp6a	64	62.528	Oryzias_melastigma
ENSCPBG00000010771	LARP6	84	68.879	ENSOGAG00000000522	LARP6	89	69.794	Otolemur_garnettii
ENSCPBG00000010771	LARP6	81	70.883	ENSOARG00000018750	LARP6	97	70.883	Ovis_aries
ENSCPBG00000010771	LARP6	81	71.599	ENSPPAG00000031247	LARP6	99	71.599	Pan_paniscus
ENSCPBG00000010771	LARP6	84	69.406	ENSPPRG00000011282	LARP6	89	69.108	Panthera_pardus
ENSCPBG00000010771	LARP6	81	70.406	ENSPTIG00000015318	LARP6	85	70.406	Panthera_tigris_altaica
ENSCPBG00000010771	LARP6	84	70.320	ENSPTRG00000007234	LARP6	89	70.023	Pan_troglodytes
ENSCPBG00000010771	LARP6	84	70.320	ENSPANG00000016362	LARP6	89	70.023	Papio_anubis
ENSCPBG00000010771	LARP6	88	60.759	ENSPKIG00000004511	LARP6	70	60.759	Paramormyrops_kingsleyae
ENSCPBG00000010771	LARP6	92	59.388	ENSPKIG00000020103	larp6a	84	62.162	Paramormyrops_kingsleyae
ENSCPBG00000010771	LARP6	60	94.286	ENSPSIG00000009071	LARP6	92	90.732	Pelodiscus_sinensis
ENSCPBG00000010771	LARP6	88	61.407	ENSPMGG00000006958	larp6a	86	63.265	Periophthalmus_magnuspinnatus
ENSCPBG00000010771	LARP6	89	66.245	ENSPEMG00000012909	Larp6	89	69.565	Peromyscus_maniculatus_bairdii
ENSCPBG00000010771	LARP6	84	71.461	ENSPCIG00000020765	LARP6	85	71.461	Phascolarctos_cinereus
ENSCPBG00000010771	LARP6	88	60.593	ENSPFOG00000014175	larp6a	90	60.593	Poecilia_formosa
ENSCPBG00000010771	LARP6	88	60.722	ENSPLAG00000011105	larp6a	67	60.722	Poecilia_latipinna
ENSCPBG00000010771	LARP6	88	60.851	ENSPMEG00000011085	larp6a	67	60.851	Poecilia_mexicana
ENSCPBG00000010771	LARP6	88	60.510	ENSPREG00000008067	larp6a	63	62.132	Poecilia_reticulata
ENSCPBG00000010771	LARP6	84	70.320	ENSPPYG00000006604	LARP6	89	70.023	Pongo_abelii
ENSCPBG00000010771	LARP6	61	76.829	ENSPCAG00000014197	LARP6	75	76.829	Procavia_capensis
ENSCPBG00000010771	LARP6	86	68.456	ENSPCOG00000022934	LARP6	89	69.108	Propithecus_coquereli
ENSCPBG00000010771	LARP6	84	69.565	ENSPVAG00000005618	LARP6	89	69.565	Pteropus_vampyrus
ENSCPBG00000010771	LARP6	90	60.669	ENSPNYG00000009835	larp6a	86	62.444	Pundamilia_nyererei
ENSCPBG00000010771	LARP6	85	58.515	ENSPNAG00000017966	larp6a	74	58.952	Pygocentrus_nattereri
ENSCPBG00000010771	LARP6	84	70.023	ENSRNOG00000012438	Larp6	89	70.023	Rattus_norvegicus
ENSCPBG00000010771	LARP6	89	67.462	ENSRBIG00000032902	LARP6	86	71.599	Rhinopithecus_bieti
ENSCPBG00000010771	LARP6	84	70.320	ENSRROG00000043074	LARP6	89	70.023	Rhinopithecus_roxellana
ENSCPBG00000010771	LARP6	81	71.599	ENSSBOG00000024190	LARP6	99	71.599	Saimiri_boliviensis_boliviensis
ENSCPBG00000010771	LARP6	82	68.171	ENSSHAG00000018495	LARP6	98	68.496	Sarcophilus_harrisii
ENSCPBG00000010771	LARP6	88	56.803	ENSSFOG00015002254	LARP6	83	57.373	Scleropages_formosus
ENSCPBG00000010771	LARP6	81	61.305	ENSSFOG00015023268	larp6a	83	61.305	Scleropages_formosus
ENSCPBG00000010771	LARP6	88	61.325	ENSSMAG00000009953	larp6a	66	61.325	Scophthalmus_maximus
ENSCPBG00000010771	LARP6	88	60.638	ENSSDUG00000007438	larp6a	66	60.638	Seriola_dumerili
ENSCPBG00000010771	LARP6	88	60.638	ENSSLDG00000016647	larp6a	67	60.638	Seriola_lalandi_dorsalis
ENSCPBG00000010771	LARP6	81	86.842	ENSSPUG00000011312	LARP6	99	86.842	Sphenodon_punctatus
ENSCPBG00000010771	LARP6	88	60.000	ENSSPAG00000020502	larp6a	63	61.765	Stegastes_partitus
ENSCPBG00000010771	LARP6	84	68.879	ENSSSCG00000004974	LARP6	89	68.879	Sus_scrofa
ENSCPBG00000010771	LARP6	82	81.132	ENSTGUG00000005808	LARP6	100	81.132	Taeniopygia_guttata
ENSCPBG00000010771	LARP6	88	59.873	ENSTRUG00000003151	larp6a	65	61.074	Takifugu_rubripes
ENSCPBG00000010771	LARP6	88	59.355	ENSTNIG00000011926	larp6a	95	59.355	Tetraodon_nigroviridis
ENSCPBG00000010771	LARP6	82	69.668	ENSTBEG00000015077	LARP6	99	69.668	Tupaia_belangeri
ENSCPBG00000010771	LARP6	81	69.928	ENSUAMG00000010467	LARP6	84	69.928	Ursus_americanus
ENSCPBG00000010771	LARP6	85	69.595	ENSVVUG00000015227	LARP6	99	69.595	Vulpes_vulpes
ENSCPBG00000010771	LARP6	93	71.663	ENSXETG00000020340	larp6	96	71.458	Xenopus_tropicalis
ENSCPBG00000010771	LARP6	89	60.504	ENSXCOG00000012654	larp6a	96	60.504	Xiphophorus_couchianus
ENSCPBG00000010771	LARP6	88	60.638	ENSXMAG00000021015	larp6a	64	60.638	Xiphophorus_maculatus