EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000010944 (Gene tree)
Gene ID: 101932127
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Minus strand
Length: 19795 bases
Position: chrKK083496.1:96901-116695
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000014735	Fox-1_C	PF12414.8	3.6e-33	1	1
ENSCPBP00000014735	RRM_1	PF00076.22	2.8e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000017481	-	1383	-	ENSCPBP00000014735	360 (aa)	XP_023969310	UPI000CE646EC

Gene Model

Click here to download ENSCPBG00000010944's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000010944's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000010944	-	93	49.628	ENSCPBG00000023144	RBFOX2	92	54.252
ENSCPBG00000010944	-	97	53.788	ENSCPBG00000026626	RBFOX1	98	47.677
ENSCPBG00000010944	-	92	57.143	ENSCPBG00000010904	RBFOX3	98	56.471

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000010944	-	97	55.641	ENSAPOG00000016304	rbfox1l	98	54.286	Acanthochromis_polyacanthus
ENSCPBG00000010944	-	100	50.769	ENSACIG00000006441	rbfox1l	100	50.129	Amphilophus_citrinellus
ENSCPBG00000010944	-	64	69.672	ENSAOCG00000020938	rbfox1l	73	66.135	Amphiprion_ocellaris
ENSCPBG00000010944	-	100	56.962	ENSAPEG00000008232	rbfox1l	100	54.912	Amphiprion_percula
ENSCPBG00000010944	-	100	54.198	ENSATEG00000022649	rbfox1l	100	54.005	Anabas_testudineus
ENSCPBG00000010944	-	74	80.443	ENSACAG00000011931	-	94	84.739	Anolis_carolinensis
ENSCPBG00000010944	-	100	55.725	ENSACLG00000021394	rbfox1l	100	54.061	Astatotilapia_calliptera
ENSCPBG00000010944	-	100	58.355	ENSAMXG00000010470	rbfox1l	65	69.841	Astyanax_mexicanus
ENSCPBG00000010944	-	100	58.333	ENSCSEG00000018898	rbfox1l	100	57.364	Cynoglossus_semilaevis
ENSCPBG00000010944	-	100	58.779	ENSCVAG00000007986	rbfox1l	100	55.499	Cyprinodon_variegatus
ENSCPBG00000010944	-	100	55.357	ENSDARG00000021184	rbfox1l	100	55.443	Danio_rerio
ENSCPBG00000010944	-	100	53.941	ENSELUG00000015077	rbfox1l	100	54.568	Esox_lucius
ENSCPBG00000010944	-	78	78.049	ENSFHEG00000016557	rbfox1l	95	78.049	Fundulus_heteroclitus
ENSCPBG00000010944	-	100	59.231	ENSGMOG00000005040	rbfox1l	100	57.474	Gadus_morhua
ENSCPBG00000010944	-	74	66.906	ENSGAFG00000013211	rbfox1l	69	69.960	Gambusia_affinis
ENSCPBG00000010944	-	100	57.692	ENSGACG00000010757	rbfox1l	100	56.122	Gasterosteus_aculeatus
ENSCPBG00000010944	-	71	97.244	ENSGAGG00000012440	-	92	97.244	Gopherus_agassizii
ENSCPBG00000010944	-	100	55.725	ENSHBUG00000013406	rbfox1l	100	54.061	Haplochromis_burtoni
ENSCPBG00000010944	-	100	54.950	ENSHCOG00000020771	rbfox1l	100	55.112	Hippocampus_comes
ENSCPBG00000010944	-	99	56.658	ENSIPUG00000000065	rbfox1l	71	71.937	Ictalurus_punctatus
ENSCPBG00000010944	-	100	57.436	ENSKMAG00000005146	rbfox1l	65	70.196	Kryptolebias_marmoratus
ENSCPBG00000010944	-	100	57.653	ENSLBEG00000017089	rbfox1l	100	54.613	Labrus_bergylta
ENSCPBG00000010944	-	100	56.061	ENSMAMG00000019480	rbfox1l	66	68.898	Mastacembelus_armatus
ENSCPBG00000010944	-	100	55.725	ENSMZEG00005016374	rbfox1l	100	54.061	Maylandia_zebra
ENSCPBG00000010944	-	100	59.067	ENSMMOG00000016530	rbfox1l	100	55.065	Mola_mola
ENSCPBG00000010944	-	100	59.894	ENSMALG00000009384	rbfox1l	100	58.021	Monopterus_albus
ENSCPBG00000010944	-	100	55.784	ENSNBRG00000003346	rbfox1l	100	54.103	Neolamprologus_brichardi
ENSCPBG00000010944	-	100	55.980	ENSONIG00000012754	rbfox1l	100	54.061	Oreochromis_niloticus
ENSCPBG00000010944	-	100	57.584	ENSORLG00000011269	rbfox1l	100	53.808	Oryzias_latipes
ENSCPBG00000010944	-	100	57.584	ENSORLG00020000162	rbfox1l	100	53.563	Oryzias_latipes_hni
ENSCPBG00000010944	-	100	57.949	ENSORLG00015013464	rbfox1l	100	53.808	Oryzias_latipes_hsok
ENSCPBG00000010944	-	100	57.436	ENSOMEG00000010584	rbfox1l	100	56.962	Oryzias_melastigma
ENSCPBG00000010944	-	100	57.653	ENSPKIG00000012029	rbfox1l	100	55.128	Paramormyrops_kingsleyae
ENSCPBG00000010944	-	100	55.784	ENSPMGG00000012082	rbfox1l	100	53.247	Periophthalmus_magnuspinnatus
ENSCPBG00000010944	-	100	58.205	ENSPFOG00000009338	rbfox1l	66	69.291	Poecilia_formosa
ENSCPBG00000010944	-	71	59.091	ENSPLAG00000012816	rbfox1l	73	61.506	Poecilia_latipinna
ENSCPBG00000010944	-	100	56.041	ENSPMEG00000017597	rbfox1l	100	53.230	Poecilia_mexicana
ENSCPBG00000010944	-	100	56.701	ENSPREG00000007940	rbfox1l	64	65.600	Poecilia_reticulata
ENSCPBG00000010944	-	100	55.725	ENSPNYG00000002098	rbfox1l	100	54.061	Pundamilia_nyererei
ENSCPBG00000010944	-	100	58.418	ENSPNAG00000001620	rbfox1l	100	55.668	Pygocentrus_nattereri
ENSCPBG00000010944	-	100	57.545	ENSSFOG00015000675	rbfox1l	100	56.736	Scleropages_formosus
ENSCPBG00000010944	-	100	58.031	ENSSMAG00000013090	rbfox1l	100	55.844	Scophthalmus_maximus
ENSCPBG00000010944	-	100	53.713	ENSSDUG00000008705	rbfox1l	100	53.015	Seriola_dumerili
ENSCPBG00000010944	-	100	54.453	ENSSLDG00000022256	rbfox1l	100	52.645	Seriola_lalandi_dorsalis
ENSCPBG00000010944	-	100	57.990	ENSSPAG00000016620	rbfox1l	100	57.326	Stegastes_partitus
ENSCPBG00000010944	-	96	57.182	ENSTRUG00000015905	rbfox1l	99	53.243	Takifugu_rubripes
ENSCPBG00000010944	-	66	67.045	ENSTNIG00000008088	rbfox1l	99	66.540	Tetraodon_nigroviridis
ENSCPBG00000010944	-	100	59.126	ENSXMAG00000023471	rbfox1l	65	69.565	Xiphophorus_maculatus