EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCPBG00000010968 (Gene tree)
Gene ID: 103306052
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Minus strand
Length: 16474 bases
Position: chrKK082917.1:8926940-8943413
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000014768	SMN	PF06003.12	1.3e-131	1	1
ENSCPBP00000014766	SMN	PF06003.12	1.7e-130	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000017517	-	1089	-	ENSCPBP00000014766	260 (aa)	-	-
ENSCPBT00000017519	-	997	-	ENSCPBP00000014768	316 (aa)	-	-

Gene Model

Click here to download ENSCPBG00000010968's gene model file

Pathways

Pathway ID	Pathway Name	Source
cpic03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000010968's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000010968	-	99	62.222	ENSG00000205571	SMN2	99	61.922	Homo_sapiens
ENSCPBG00000010968	-	99	62.222	ENSG00000172062	SMN1	99	61.922	Homo_sapiens
ENSCPBG00000010968	-	97	48.881	ENSAPOG00000011324	smn1	96	49.827	Acanthochromis_polyacanthus
ENSCPBG00000010968	-	99	63.941	ENSAMEG00000003316	-	97	62.752	Ailuropoda_melanoleuca
ENSCPBG00000010968	-	92	46.275	ENSACIG00000019772	-	98	45.956	Amphilophus_citrinellus
ENSCPBG00000010968	-	97	49.434	ENSAOCG00000024444	smn1	96	49.827	Amphiprion_ocellaris
ENSCPBG00000010968	-	97	49.811	ENSAPEG00000016504	smn1	96	50.173	Amphiprion_percula
ENSCPBG00000010968	-	94	48.496	ENSATEG00000002182	smn1	81	48.944	Anabas_testudineus
ENSCPBG00000010968	-	73	71.859	ENSAPLG00000010912	-	99	70.352	Anas_platyrhynchos
ENSCPBG00000010968	-	99	76.538	ENSACAG00000010017	-	99	74.368	Anolis_carolinensis
ENSCPBG00000010968	-	99	62.132	ENSANAG00000032133	-	99	59.866	Aotus_nancymaae
ENSCPBG00000010968	-	97	54.023	ENSACLG00000007308	smn1	91	54.745	Astatotilapia_calliptera
ENSCPBG00000010968	-	99	52.672	ENSAMXG00000013884	smn1	99	52.098	Astyanax_mexicanus
ENSCPBG00000010968	-	96	62.595	ENSBTAG00000005743	SMN2	98	60.702	Bos_taurus
ENSCPBG00000010968	-	99	62.731	ENSCJAG00000016290	-	96	63.636	Callithrix_jacchus
ENSCPBG00000010968	-	99	64.925	ENSCAFG00000007812	SMN	99	63.356	Canis_familiaris
ENSCPBG00000010968	-	99	65.299	ENSCAFG00020019229	-	93	63.356	Canis_lupus_dingo
ENSCPBG00000010968	-	96	62.500	ENSCHIG00000015559	-	98	59.727	Capra_hircus
ENSCPBG00000010968	-	99	62.313	ENSTSYG00000012058	-	98	63.953	Carlito_syrichta
ENSCPBG00000010968	-	75	55.882	ENSCAPG00000011021	-	91	56.373	Cavia_aperea
ENSCPBG00000010968	-	96	60.837	ENSCPOG00000036973	-	92	61.905	Cavia_porcellus
ENSCPBG00000010968	-	96	59.925	ENSCPOG00000012328	-	93	61.011	Cavia_porcellus
ENSCPBG00000010968	-	99	62.082	ENSCCAG00000018127	-	97	61.512	Cebus_capucinus
ENSCPBG00000010968	-	99	61.852	ENSCATG00000037002	-	97	62.455	Cercocebus_atys
ENSCPBG00000010968	-	96	59.848	ENSCLAG00000000284	-	97	60.554	Chinchilla_lanigera
ENSCPBG00000010968	-	99	62.222	ENSCSAG00000015688	-	98	61.017	Chlorocebus_sabaeus
ENSCPBG00000010968	-	63	80.000	ENSCHOG00000007346	-	100	57.037	Choloepus_hoffmanni
ENSCPBG00000010968	-	99	55.426	ENSCANG00000033324	-	89	60.674	Colobus_angolensis_palliatus
ENSCPBG00000010968	-	99	63.060	ENSCANG00000038242	-	99	63.177	Colobus_angolensis_palliatus
ENSCPBG00000010968	-	99	56.667	ENSCGRG00001017959	-	98	57.586	Cricetulus_griseus_chok1gshd
ENSCPBG00000010968	-	85	44.043	ENSCGRG00001016998	-	94	45.487	Cricetulus_griseus_chok1gshd
ENSCPBG00000010968	-	99	56.667	ENSCGRG00000007698	Smn1	98	57.586	Cricetulus_griseus_crigri
ENSCPBG00000010968	-	95	48.315	ENSCSEG00000015227	smn1	96	49.104	Cynoglossus_semilaevis
ENSCPBG00000010968	-	97	47.312	ENSCVAG00000007498	smn1	96	48.789	Cyprinodon_variegatus
ENSCPBG00000010968	-	99	53.025	ENSDARG00000018494	smn1	98	51.379	Danio_rerio
ENSCPBG00000010968	-	70	55.738	ENSDNOG00000045949	-	95	51.739	Dasypus_novemcinctus
ENSCPBG00000010968	-	89	60.082	ENSDNOG00000007283	-	99	61.475	Dasypus_novemcinctus
ENSCPBG00000010968	-	87	57.143	ENSDORG00000007082	Smn1	97	53.405	Dipodomys_ordii
ENSCPBG00000010968	-	70	55.191	ENSETEG00000001406	-	93	54.124	Echinops_telfairi
ENSCPBG00000010968	-	95	39.130	ENSEBUG00000011902	smn1	95	41.786	Eptatretus_burgeri
ENSCPBG00000010968	-	94	59.690	ENSEASG00005018000	-	98	56.429	Equus_asinus_asinus
ENSCPBG00000010968	-	99	61.624	ENSECAG00000015215	-	99	61.356	Equus_caballus
ENSCPBG00000010968	-	93	62.800	ENSEEUG00000015777	-	100	62.000	Erinaceus_europaeus
ENSCPBG00000010968	-	99	53.846	ENSELUG00000018067	smn1	99	53.979	Esox_lucius
ENSCPBG00000010968	-	99	64.815	ENSFCAG00000028292	SMN	99	63.265	Felis_catus
ENSCPBG00000010968	-	99	74.905	ENSFALG00000012320	-	95	74.242	Ficedula_albicollis
ENSCPBG00000010968	-	96	59.245	ENSFDAG00000017683	-	93	60.870	Fukomys_damarensis
ENSCPBG00000010968	-	97	50.936	ENSFHEG00000018508	smn1	97	52.708	Fundulus_heteroclitus
ENSCPBG00000010968	-	97	46.617	ENSGMOG00000017279	smn1	93	50.376	Gadus_morhua
ENSCPBG00000010968	-	99	75.385	ENSGALG00000002430	SMN	98	75.655	Gallus_gallus
ENSCPBG00000010968	-	96	52.400	ENSGAFG00000009501	smn1	96	50.694	Gambusia_affinis
ENSCPBG00000010968	-	99	51.515	ENSGACG00000010584	smn1	93	52.030	Gasterosteus_aculeatus
ENSCPBG00000010968	-	99	95.753	ENSGAGG00000011374	-	100	96.029	Gopherus_agassizii
ENSCPBG00000010968	-	95	38.660	ENSGAGG00000013639	-	93	38.974	Gopherus_agassizii
ENSCPBG00000010968	-	93	60.996	ENSGGOG00000003872	-	99	59.398	Gorilla_gorilla
ENSCPBG00000010968	-	66	66.082	ENSGGOG00000026704	-	90	63.077	Gorilla_gorilla
ENSCPBG00000010968	-	99	51.661	ENSHBUG00000013987	smn1	96	55.556	Haplochromis_burtoni
ENSCPBG00000010968	-	96	60.687	ENSHGLG00000001905	-	94	59.707	Heterocephalus_glaber_female
ENSCPBG00000010968	-	96	62.547	ENSHGLG00000001018	-	93	62.230	Heterocephalus_glaber_female
ENSCPBG00000010968	-	94	61.328	ENSHGLG00100018676	-	96	60.300	Heterocephalus_glaber_male
ENSCPBG00000010968	-	96	62.547	ENSHGLG00100011252	-	93	62.230	Heterocephalus_glaber_male
ENSCPBG00000010968	-	97	46.442	ENSHCOG00000017136	smn1	92	47.518	Hippocampus_comes
ENSCPBG00000010968	-	98	50.746	ENSIPUG00000012580	smn1	86	49.650	Ictalurus_punctatus
ENSCPBG00000010968	-	93	61.660	ENSSTOG00000012288	-	100	58.214	Ictidomys_tridecemlineatus
ENSCPBG00000010968	-	62	53.416	ENSJJAG00000014853	-	87	54.023	Jaculus_jaculus
ENSCPBG00000010968	-	97	47.794	ENSKMAG00000007239	smn1	96	50.714	Kryptolebias_marmoratus
ENSCPBG00000010968	-	97	49.064	ENSLBEG00000022550	smn1	96	50.526	Labrus_bergylta
ENSCPBG00000010968	-	98	36.749	ENSLACG00000009808	-	90	35.231	Latimeria_chalumnae
ENSCPBG00000010968	-	94	33.835	ENSLOCG00000000801	-	91	30.545	Lepisosteus_oculatus
ENSCPBG00000010968	-	97	53.150	ENSLOCG00000011339	smn1	96	56.296	Lepisosteus_oculatus
ENSCPBG00000010968	-	99	63.004	ENSLAFG00000003425	-	97	62.791	Loxodonta_africana
ENSCPBG00000010968	-	99	58.889	ENSMFAG00000008812	-	98	57.627	Macaca_fascicularis
ENSCPBG00000010968	-	99	61.852	ENSMFAG00000031523	SMN1	98	61.538	Macaca_fascicularis
ENSCPBG00000010968	-	99	58.148	ENSMMUG00000030594	-	98	56.949	Macaca_mulatta
ENSCPBG00000010968	-	99	61.852	ENSMMUG00000020214	SMN1	98	61.538	Macaca_mulatta
ENSCPBG00000010968	-	82	51.982	ENSMNEG00000036423	-	87	51.982	Macaca_nemestrina
ENSCPBG00000010968	-	98	61.798	ENSMNEG00000035094	-	98	61.538	Macaca_nemestrina
ENSCPBG00000010968	-	99	62.222	ENSMLEG00000041902	-	98	62.222	Mandrillus_leucophaeus
ENSCPBG00000010968	-	97	53.358	ENSMAMG00000011034	smn1	96	51.408	Mastacembelus_armatus
ENSCPBG00000010968	-	99	53.903	ENSMZEG00005013634	smn1	96	55.197	Maylandia_zebra
ENSCPBG00000010968	-	75	68.020	ENSMGAG00000008889	-	97	66.667	Meleagris_gallopavo
ENSCPBG00000010968	-	99	55.390	ENSMAUG00000010262	Smn1	98	56.207	Mesocricetus_auratus
ENSCPBG00000010968	-	79	60.731	ENSMICG00000034708	-	89	61.957	Microcebus_murinus
ENSCPBG00000010968	-	99	56.296	ENSMOCG00000017833	Smn1	98	57.241	Microtus_ochrogaster
ENSCPBG00000010968	-	96	48.519	ENSMMOG00000005504	smn1	97	51.661	Mola_mola
ENSCPBG00000010968	-	96	71.984	ENSMODG00000001436	-	97	71.631	Monodelphis_domestica
ENSCPBG00000010968	-	97	49.813	ENSMALG00000008025	smn1	96	50.178	Monopterus_albus
ENSCPBG00000010968	-	96	57.795	MGP_CAROLIEiJ_G0018836	Smn1	97	59.155	Mus_caroli
ENSCPBG00000010968	-	99	56.667	ENSMUSG00000021645	Smn1	98	58.076	Mus_musculus
ENSCPBG00000010968	-	99	57.463	MGP_PahariEiJ_G0015911	Smn1	98	57.093	Mus_pahari
ENSCPBG00000010968	-	96	57.034	MGP_SPRETEiJ_G0019718	Smn1	97	58.451	Mus_spretus
ENSCPBG00000010968	-	94	64.981	ENSMPUG00000014470	-	99	64.769	Mustela_putorius_furo
ENSCPBG00000010968	-	99	61.733	ENSMLUG00000010603	-	95	59.934	Myotis_lucifugus
ENSCPBG00000010968	-	96	61.832	ENSNGAG00000019833	Smn1	93	61.538	Nannospalax_galili
ENSCPBG00000010968	-	97	53.788	ENSNBRG00000023000	smn1	96	54.610	Neolamprologus_brichardi
ENSCPBG00000010968	-	99	61.852	ENSNLEG00000004454	-	99	61.566	Nomascus_leucogenys
ENSCPBG00000010968	-	83	69.058	ENSMEUG00000011393	-	100	70.404	Notamacropus_eugenii
ENSCPBG00000010968	-	93	64.706	ENSOPRG00000002015	-	100	64.706	Ochotona_princeps
ENSCPBG00000010968	-	93	62.846	ENSODEG00000015976	-	92	63.118	Octodon_degus
ENSCPBG00000010968	-	97	53.409	ENSONIG00000011799	smn1	96	54.610	Oreochromis_niloticus
ENSCPBG00000010968	-	96	73.228	ENSOANG00000001626	-	98	71.324	Ornithorhynchus_anatinus
ENSCPBG00000010968	-	90	57.200	ENSOCUG00000025183	-	99	52.685	Oryctolagus_cuniculus
ENSCPBG00000010968	-	99	62.214	ENSOCUG00000017097	-	99	61.806	Oryctolagus_cuniculus
ENSCPBG00000010968	-	99	61.049	ENSOCUG00000026649	-	99	60.690	Oryctolagus_cuniculus
ENSCPBG00000010968	-	58	58.667	ENSORLG00000010552	smn1	96	49.296	Oryzias_latipes
ENSCPBG00000010968	-	97	52.713	ENSORLG00020007936	smn1	96	51.894	Oryzias_latipes_hni
ENSCPBG00000010968	-	97	52.045	ENSORLG00015022425	smn1	96	49.286	Oryzias_latipes_hsok
ENSCPBG00000010968	-	99	52.555	ENSOMEG00000007824	smn1	96	49.648	Oryzias_melastigma
ENSCPBG00000010968	-	93	57.692	ENSOGAG00000031414	-	92	57.196	Otolemur_garnettii
ENSCPBG00000010968	-	96	62.595	ENSOARG00000005425	-	97	61.111	Ovis_aries
ENSCPBG00000010968	-	99	61.852	ENSPPAG00000036640	-	99	61.566	Pan_paniscus
ENSCPBG00000010968	-	99	63.704	ENSPPRG00000005575	-	99	63.265	Panthera_pardus
ENSCPBG00000010968	-	99	63.469	ENSPTIG00000007745	-	99	63.051	Panthera_tigris_altaica
ENSCPBG00000010968	-	99	61.538	ENSPTRG00000016955	-	99	61.268	Pan_troglodytes
ENSCPBG00000010968	-	99	59.533	ENSPANG00000000253	-	99	57.823	Papio_anubis
ENSCPBG00000010968	-	99	61.852	ENSPANG00000013601	-	98	61.538	Papio_anubis
ENSCPBG00000010968	-	97	54.789	ENSPKIG00000011096	smn1	96	50.916	Paramormyrops_kingsleyae
ENSCPBG00000010968	-	100	89.272	ENSPSIG00000014787	-	86	91.923	Pelodiscus_sinensis
ENSCPBG00000010968	-	97	51.908	ENSPMGG00000012285	smn1	96	49.813	Periophthalmus_magnuspinnatus
ENSCPBG00000010968	-	99	43.431	ENSPMAG00000005004	smn1	95	40.559	Petromyzon_marinus
ENSCPBG00000010968	-	96	71.484	ENSPCIG00000025764	-	98	71.326	Phascolarctos_cinereus
ENSCPBG00000010968	-	96	51.515	ENSPFOG00000007786	smn1	96	50.694	Poecilia_formosa
ENSCPBG00000010968	-	96	54.000	ENSPLAG00000012071	smn1	96	51.042	Poecilia_latipinna
ENSCPBG00000010968	-	96	53.600	ENSPMEG00000017085	smn1	96	50.694	Poecilia_mexicana
ENSCPBG00000010968	-	96	52.800	ENSPREG00000005824	smn1	96	51.042	Poecilia_reticulata
ENSCPBG00000010968	-	92	48.333	ENSPPYG00000019189	-	99	46.091	Pongo_abelii
ENSCPBG00000010968	-	99	62.222	ENSPPYG00000015533	-	96	62.963	Pongo_abelii
ENSCPBG00000010968	-	99	64.338	ENSPCAG00000004187	-	99	63.235	Procavia_capensis
ENSCPBG00000010968	-	70	63.934	ENSPCOG00000022307	-	83	61.111	Propithecus_coquereli
ENSCPBG00000010968	-	99	63.197	ENSPVAG00000005977	-	99	62.500	Pteropus_vampyrus
ENSCPBG00000010968	-	97	53.788	ENSPNYG00000014148	smn1	96	54.610	Pundamilia_nyererei
ENSCPBG00000010968	-	99	50.545	ENSPNAG00000014007	smn1	87	52.632	Pygocentrus_nattereri
ENSCPBG00000010968	-	99	56.667	ENSRNOG00000018067	Smn1	98	57.931	Rattus_norvegicus
ENSCPBG00000010968	-	99	62.593	ENSRBIG00000037052	-	98	61.538	Rhinopithecus_bieti
ENSCPBG00000010968	-	93	56.855	ENSRBIG00000036775	-	89	57.692	Rhinopithecus_bieti
ENSCPBG00000010968	-	98	55.253	ENSRROG00000031088	-	93	53.285	Rhinopithecus_roxellana
ENSCPBG00000010968	-	99	62.593	ENSRROG00000039399	-	99	62.278	Rhinopithecus_roxellana
ENSCPBG00000010968	-	99	63.296	ENSSBOG00000011665	-	96	63.636	Saimiri_boliviensis_boliviensis
ENSCPBG00000010968	-	89	58.730	ENSSBOG00000020112	-	87	59.684	Saimiri_boliviensis_boliviensis
ENSCPBG00000010968	-	96	71.484	ENSSHAG00000001499	-	98	70.566	Sarcophilus_harrisii
ENSCPBG00000010968	-	97	56.538	ENSSFOG00015015507	smn1	96	57.875	Scleropages_formosus
ENSCPBG00000010968	-	97	46.442	ENSSMAG00000007922	smn1	96	51.264	Scophthalmus_maximus
ENSCPBG00000010968	-	97	50.187	ENSSDUG00000018533	smn1	96	50.000	Seriola_dumerili
ENSCPBG00000010968	-	97	50.562	ENSSLDG00000021135	smn1	96	50.345	Seriola_lalandi_dorsalis
ENSCPBG00000010968	-	99	81.992	ENSSPUG00000000373	-	100	81.004	Sphenodon_punctatus
ENSCPBG00000010968	-	97	52.569	ENSSPAG00000004345	smn1	96	49.110	Stegastes_partitus
ENSCPBG00000010968	-	78	43.750	ENSSSCG00000033865	-	94	42.788	Sus_scrofa
ENSCPBG00000010968	-	99	46.183	ENSSSCG00000029127	-	96	47.368	Sus_scrofa
ENSCPBG00000010968	-	99	62.825	ENSSSCG00000016970	-	99	62.500	Sus_scrofa
ENSCPBG00000010968	-	93	67.843	ENSTGUG00000001548	-	97	66.052	Taeniopygia_guttata
ENSCPBG00000010968	-	99	48.162	ENSTRUG00000000736	smn	98	48.780	Takifugu_rubripes
ENSCPBG00000010968	-	99	44.128	ENSTNIG00000009892	smn1	99	48.084	Tetraodon_nigroviridis
ENSCPBG00000010968	-	65	65.294	ENSTBEG00000002399	-	93	63.402	Tupaia_belangeri
ENSCPBG00000010968	-	96	64.981	ENSTTRG00000005080	-	98	63.287	Tursiops_truncatus
ENSCPBG00000010968	-	66	66.860	ENSUAMG00000024947	-	72	64.322	Ursus_americanus
ENSCPBG00000010968	-	99	63.941	ENSUMAG00000007842	-	75	62.838	Ursus_maritimus
ENSCPBG00000010968	-	93	59.127	ENSVPAG00000009887	-	100	56.429	Vicugna_pacos
ENSCPBG00000010968	-	99	64.925	ENSVVUG00000006934	-	99	63.356	Vulpes_vulpes
ENSCPBG00000010968	-	99	62.500	ENSXETG00000018189	smn2	99	61.592	Xenopus_tropicalis
ENSCPBG00000010968	-	92	33.209	ENSXETG00000004912	-	78	55.932	Xenopus_tropicalis
ENSCPBG00000010968	-	96	53.200	ENSXMAG00000001521	smn1	95	52.190	Xiphophorus_maculatus