EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCPBG00000010998 (Gene tree)
Gene ID: 101932452
Gene Symbol: YARS
Alias: YRS|YTS|tyrRS
Full Name: tyrosyl-tRNA synthetase
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Plus strand
Length: 19777 bases
Position: chrKK082979.1:4154587-4174363
Accession: 12840
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000014824	tRNA_bind	PF01588.20	8.8e-32	1	1
ENSCPBP00000014825	tRNA_bind	PF01588.20	9.4e-32	1	1
ENSCPBP00000014824	tRNA-synt_1b	PF00579.25	1.4e-75	1	1
ENSCPBP00000014825	tRNA-synt_1b	PF00579.25	1.9e-58	1	2
ENSCPBP00000014825	tRNA-synt_1b	PF00579.25	1.9e-58	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000017577	YARS-201	2824	XM_005302151	ENSCPBP00000014824	528 (aa)	XP_005302208	UPI000388BE0D
ENSCPBT00000017580	YARS-202	1506	-	ENSCPBP00000014825	501 (aa)	-	-

Gene Model

Click here to download ENSCPBG00000010998's gene model file

Pathways

Pathway ID	Pathway Name	Source
cpic00970	Aminoacyl-tRNA biosynthesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000010998's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000010998	YARS	100	86.174	ENSG00000134684	YARS	100	86.174	Homo_sapiens
ENSCPBG00000010998	YARS	100	77.298	ENSAPOG00000020788	yars	100	77.861	Acanthochromis_polyacanthus
ENSCPBG00000010998	YARS	100	86.932	ENSAMEG00000007476	YARS	100	86.932	Ailuropoda_melanoleuca
ENSCPBG00000010998	YARS	100	79.167	ENSACIG00000017504	yars	100	79.167	Amphilophus_citrinellus
ENSCPBG00000010998	YARS	100	77.341	ENSAOCG00000009987	yars	100	77.903	Amphiprion_ocellaris
ENSCPBG00000010998	YARS	100	77.341	ENSAPEG00000001273	yars	100	77.903	Amphiprion_percula
ENSCPBG00000010998	YARS	100	77.652	ENSATEG00000005301	yars	100	77.715	Anabas_testudineus
ENSCPBG00000010998	YARS	98	82.205	ENSAPLG00000005739	YARS	98	82.205	Anas_platyrhynchos
ENSCPBG00000010998	YARS	99	85.009	ENSACAG00000003568	YARS	99	85.009	Anolis_carolinensis
ENSCPBG00000010998	YARS	100	86.364	ENSANAG00000034533	YARS	100	86.364	Aotus_nancymaae
ENSCPBG00000010998	YARS	100	77.273	ENSACLG00000004618	yars	100	77.273	Astatotilapia_calliptera
ENSCPBG00000010998	YARS	100	80.189	ENSAMXG00000010993	yars	100	80.189	Astyanax_mexicanus
ENSCPBG00000010998	YARS	100	86.742	ENSBTAG00000018065	YARS	100	86.742	Bos_taurus
ENSCPBG00000010998	YARS	100	86.174	ENSCJAG00000001037	YARS	100	86.220	Callithrix_jacchus
ENSCPBG00000010998	YARS	100	86.742	ENSCAFG00000010481	YARS	94	86.742	Canis_familiaris
ENSCPBG00000010998	YARS	100	86.767	ENSCAFG00020025379	YARS	100	86.767	Canis_lupus_dingo
ENSCPBG00000010998	YARS	100	86.553	ENSCHIG00000014340	YARS	100	86.553	Capra_hircus
ENSCPBG00000010998	YARS	100	86.174	ENSTSYG00000005019	YARS	100	86.174	Carlito_syrichta
ENSCPBG00000010998	YARS	90	59.874	ENSCAPG00000008627	YARS	100	60.888	Cavia_aperea
ENSCPBG00000010998	YARS	100	84.848	ENSCPOG00000009614	YARS	94	84.848	Cavia_porcellus
ENSCPBG00000010998	YARS	100	85.795	ENSCCAG00000036757	YARS	98	85.795	Cebus_capucinus
ENSCPBG00000010998	YARS	100	86.553	ENSCATG00000044394	YARS	100	86.553	Cercocebus_atys
ENSCPBG00000010998	YARS	100	85.606	ENSCLAG00000008977	YARS	93	85.606	Chinchilla_lanigera
ENSCPBG00000010998	YARS	100	86.742	ENSCSAG00000001062	YARS	100	86.742	Chlorocebus_sabaeus
ENSCPBG00000010998	YARS	96	77.996	ENSCHOG00000003939	YARS	100	77.996	Choloepus_hoffmanni
ENSCPBG00000010998	YARS	99	69.376	ENSCING00000005113	-	99	69.754	Ciona_intestinalis
ENSCPBG00000010998	YARS	99	69.011	ENSCSAVG00000003706	-	99	69.011	Ciona_savignyi
ENSCPBG00000010998	YARS	100	86.742	ENSCANG00000038285	YARS	100	86.742	Colobus_angolensis_palliatus
ENSCPBG00000010998	YARS	100	86.742	ENSCGRG00001010863	Yars	100	83.044	Cricetulus_griseus_chok1gshd
ENSCPBG00000010998	YARS	100	86.742	ENSCGRG00000007526	Yars	94	86.742	Cricetulus_griseus_crigri
ENSCPBG00000010998	YARS	100	76.792	ENSCSEG00000009643	yars	100	76.749	Cynoglossus_semilaevis
ENSCPBG00000010998	YARS	100	78.868	ENSCVAG00000016583	yars	100	78.828	Cyprinodon_variegatus
ENSCPBG00000010998	YARS	100	81.664	ENSDARG00000035913	yars	100	90.351	Danio_rerio
ENSCPBG00000010998	YARS	100	86.364	ENSDNOG00000000536	YARS	100	86.364	Dasypus_novemcinctus
ENSCPBG00000010998	YARS	100	86.553	ENSDORG00000011871	Yars	100	86.553	Dipodomys_ordii
ENSCPBG00000010998	YARS	98	66.224	FBgn0027080	TyrRS	99	66.793	Drosophila_melanogaster
ENSCPBG00000010998	YARS	91	88.889	ENSETEG00000000215	YARS	87	88.889	Echinops_telfairi
ENSCPBG00000010998	YARS	99	64.461	ENSEBUG00000004750	yars	100	64.461	Eptatretus_burgeri
ENSCPBG00000010998	YARS	99	85.660	ENSEASG00005011762	YARS	93	85.227	Equus_asinus_asinus
ENSCPBG00000010998	YARS	99	85.851	ENSECAG00000010015	YARS	68	85.417	Equus_caballus
ENSCPBG00000010998	YARS	78	85.714	ENSEEUG00000005992	-	74	85.714	Erinaceus_europaeus
ENSCPBG00000010998	YARS	100	79.924	ENSELUG00000017171	yars	100	79.924	Esox_lucius
ENSCPBG00000010998	YARS	87	91.228	ENSFCAG00000000704	YARS	100	91.228	Felis_catus
ENSCPBG00000010998	YARS	99	88.100	ENSFALG00000000592	YARS	92	88.123	Ficedula_albicollis
ENSCPBG00000010998	YARS	100	85.227	ENSFDAG00000006620	YARS	94	85.227	Fukomys_damarensis
ENSCPBG00000010998	YARS	100	77.820	ENSFHEG00000022444	yars	100	78.383	Fundulus_heteroclitus
ENSCPBG00000010998	YARS	96	75.835	ENSGMOG00000006555	yars	100	75.835	Gadus_morhua
ENSCPBG00000010998	YARS	99	88.506	ENSGALG00000003563	YARS	97	88.506	Gallus_gallus
ENSCPBG00000010998	YARS	100	76.836	ENSGACG00000008516	yars	100	77.024	Gasterosteus_aculeatus
ENSCPBG00000010998	YARS	100	96.780	ENSGAGG00000024290	YARS	100	96.780	Gopherus_agassizii
ENSCPBG00000010998	YARS	100	85.985	ENSGGOG00000014013	YARS	100	85.985	Gorilla_gorilla
ENSCPBG00000010998	YARS	100	76.449	ENSHBUG00000018909	yars	100	76.449	Haplochromis_burtoni
ENSCPBG00000010998	YARS	100	85.227	ENSHGLG00000013843	YARS	94	85.227	Heterocephalus_glaber_female
ENSCPBG00000010998	YARS	70	82.561	ENSHGLG00100020546	-	99	82.561	Heterocephalus_glaber_male
ENSCPBG00000010998	YARS	100	84.091	ENSHGLG00100002785	-	100	84.091	Heterocephalus_glaber_male
ENSCPBG00000010998	YARS	100	74.074	ENSHCOG00000006672	yars	100	74.492	Hippocampus_comes
ENSCPBG00000010998	YARS	99	78.788	ENSIPUG00000021749	yars	99	78.788	Ictalurus_punctatus
ENSCPBG00000010998	YARS	100	87.311	ENSSTOG00000012031	YARS	94	87.311	Ictidomys_tridecemlineatus
ENSCPBG00000010998	YARS	100	85.606	ENSJJAG00000013281	Yars	93	85.606	Jaculus_jaculus
ENSCPBG00000010998	YARS	100	76.504	ENSKMAG00000021752	yars	100	76.692	Kryptolebias_marmoratus
ENSCPBG00000010998	YARS	100	77.383	ENSLBEG00000024080	yars	100	77.383	Labrus_bergylta
ENSCPBG00000010998	YARS	100	80.114	ENSLACG00000015577	YARS	100	80.114	Latimeria_chalumnae
ENSCPBG00000010998	YARS	99	81.594	ENSLOCG00000002165	yars	99	81.594	Lepisosteus_oculatus
ENSCPBG00000010998	YARS	100	86.174	ENSLAFG00000003786	YARS	96	86.174	Loxodonta_africana
ENSCPBG00000010998	YARS	100	81.629	ENSMFAG00000040933	YARS	100	81.629	Macaca_fascicularis
ENSCPBG00000010998	YARS	100	86.742	ENSMMUG00000019746	YARS	100	86.742	Macaca_mulatta
ENSCPBG00000010998	YARS	100	81.096	ENSMNEG00000031865	YARS	100	81.096	Macaca_nemestrina
ENSCPBG00000010998	YARS	100	86.174	ENSMLEG00000041315	YARS	100	86.174	Mandrillus_leucophaeus
ENSCPBG00000010998	YARS	100	77.444	ENSMAMG00000006092	yars	100	77.820	Mastacembelus_armatus
ENSCPBG00000010998	YARS	100	75.797	ENSMZEG00005011426	yars	100	76.360	Maylandia_zebra
ENSCPBG00000010998	YARS	97	88.824	ENSMGAG00000005063	YARS	97	88.824	Meleagris_gallopavo
ENSCPBG00000010998	YARS	97	87.914	ENSMAUG00000021126	Yars	99	87.914	Mesocricetus_auratus
ENSCPBG00000010998	YARS	100	86.932	ENSMICG00000011204	YARS	100	86.932	Microcebus_murinus
ENSCPBG00000010998	YARS	100	86.364	ENSMOCG00000011342	Yars	94	86.364	Microtus_ochrogaster
ENSCPBG00000010998	YARS	100	74.811	ENSMMOG00000021133	yars	100	74.811	Mola_mola
ENSCPBG00000010998	YARS	100	85.985	ENSMODG00000017404	YARS	100	85.985	Monodelphis_domestica
ENSCPBG00000010998	YARS	66	78.963	ENSMALG00000003648	yars	90	82.979	Monopterus_albus
ENSCPBG00000010998	YARS	100	86.553	MGP_CAROLIEiJ_G0026513	Yars	94	86.553	Mus_caroli
ENSCPBG00000010998	YARS	100	87.311	ENSMUSG00000028811	Yars	94	87.311	Mus_musculus
ENSCPBG00000010998	YARS	100	85.985	MGP_PahariEiJ_G0028844	Yars	94	85.985	Mus_pahari
ENSCPBG00000010998	YARS	100	86.932	MGP_SPRETEiJ_G0027493	Yars	94	86.932	Mus_spretus
ENSCPBG00000010998	YARS	100	86.742	ENSMLUG00000000759	YARS	100	86.742	Myotis_lucifugus
ENSCPBG00000010998	YARS	98	85.549	ENSNGAG00000001419	Yars	100	86.640	Nannospalax_galili
ENSCPBG00000010998	YARS	100	77.462	ENSNBRG00000020413	yars	100	77.462	Neolamprologus_brichardi
ENSCPBG00000010998	YARS	100	86.364	ENSNLEG00000002922	YARS	100	86.364	Nomascus_leucogenys
ENSCPBG00000010998	YARS	79	83.529	ENSMEUG00000011824	-	75	83.529	Notamacropus_eugenii
ENSCPBG00000010998	YARS	100	81.439	ENSOPRG00000003669	YARS	100	81.439	Ochotona_princeps
ENSCPBG00000010998	YARS	100	84.659	ENSODEG00000005363	YARS	94	84.659	Octodon_degus
ENSCPBG00000010998	YARS	100	77.196	ENSONIG00000015400	yars	100	77.383	Oreochromis_niloticus
ENSCPBG00000010998	YARS	93	80.645	ENSOANG00000011779	YARS	99	80.808	Ornithorhynchus_anatinus
ENSCPBG00000010998	YARS	100	86.742	ENSOCUG00000010007	YARS	100	86.742	Oryctolagus_cuniculus
ENSCPBG00000010998	YARS	98	77.333	ENSORLG00000013982	yars	96	77.524	Oryzias_latipes
ENSCPBG00000010998	YARS	100	77.589	ENSORLG00020020750	yars	100	77.966	Oryzias_latipes_hni
ENSCPBG00000010998	YARS	100	77.298	ENSORLG00015008963	yars	100	77.674	Oryzias_latipes_hsok
ENSCPBG00000010998	YARS	100	78.343	ENSOMEG00000013016	yars	95	87.179	Oryzias_melastigma
ENSCPBG00000010998	YARS	100	87.311	ENSOGAG00000007359	YARS	100	87.311	Otolemur_garnettii
ENSCPBG00000010998	YARS	100	86.742	ENSOARG00000020897	YARS	93	86.742	Ovis_aries
ENSCPBG00000010998	YARS	100	86.364	ENSPPAG00000035791	YARS	98	86.914	Pan_paniscus
ENSCPBG00000010998	YARS	100	85.985	ENSPPRG00000023768	YARS	100	85.985	Panthera_pardus
ENSCPBG00000010998	YARS	100	85.985	ENSPTIG00000003438	YARS	100	85.985	Panthera_tigris_altaica
ENSCPBG00000010998	YARS	100	86.364	ENSPTRG00000000491	YARS	100	86.364	Pan_troglodytes
ENSCPBG00000010998	YARS	100	86.553	ENSPANG00000009804	YARS	100	86.553	Papio_anubis
ENSCPBG00000010998	YARS	100	79.924	ENSPKIG00000024596	yars	100	79.924	Paramormyrops_kingsleyae
ENSCPBG00000010998	YARS	100	80.943	ENSPSIG00000006945	YARS	100	80.943	Pelodiscus_sinensis
ENSCPBG00000010998	YARS	100	78.030	ENSPMGG00000022917	yars	100	78.030	Periophthalmus_magnuspinnatus
ENSCPBG00000010998	YARS	100	85.417	ENSPEMG00000010746	Yars	94	85.417	Peromyscus_maniculatus_bairdii
ENSCPBG00000010998	YARS	99	85.958	ENSPCIG00000022457	YARS	99	85.958	Phascolarctos_cinereus
ENSCPBG00000010998	YARS	100	76.880	ENSPFOG00000014808	yars	100	77.444	Poecilia_formosa
ENSCPBG00000010998	YARS	100	76.880	ENSPLAG00000020075	yars	100	77.444	Poecilia_latipinna
ENSCPBG00000010998	YARS	100	76.880	ENSPMEG00000002803	yars	100	77.444	Poecilia_mexicana
ENSCPBG00000010998	YARS	100	77.083	ENSPREG00000018280	yars	100	77.083	Poecilia_reticulata
ENSCPBG00000010998	YARS	100	84.181	ENSPPYG00000001585	YARS	100	84.181	Pongo_abelii
ENSCPBG00000010998	YARS	76	85.287	ENSPCAG00000011170	YARS	76	85.287	Procavia_capensis
ENSCPBG00000010998	YARS	100	86.553	ENSPCOG00000021026	YARS	100	86.553	Propithecus_coquereli
ENSCPBG00000010998	YARS	100	85.606	ENSPVAG00000010984	YARS	100	85.606	Pteropus_vampyrus
ENSCPBG00000010998	YARS	100	77.273	ENSPNYG00000000860	yars	100	77.273	Pundamilia_nyererei
ENSCPBG00000010998	YARS	100	80.907	ENSPNAG00000009622	yars	100	80.907	Pygocentrus_nattereri
ENSCPBG00000010998	YARS	100	86.742	ENSRNOG00000007213	Yars	94	86.742	Rattus_norvegicus
ENSCPBG00000010998	YARS	55	72.757	ENSRBIG00000044271	-	90	72.757	Rhinopithecus_bieti
ENSCPBG00000010998	YARS	100	86.553	ENSRROG00000039913	YARS	100	86.553	Rhinopithecus_roxellana
ENSCPBG00000010998	YARS	100	86.364	ENSSBOG00000030205	YARS	100	86.719	Saimiri_boliviensis_boliviensis
ENSCPBG00000010998	YARS	100	85.795	ENSSHAG00000011851	YARS	100	85.795	Sarcophilus_harrisii
ENSCPBG00000010998	YARS	100	80.492	ENSSFOG00015007179	yars	100	80.492	Scleropages_formosus
ENSCPBG00000010998	YARS	100	75.189	ENSSMAG00000020736	yars	100	75.189	Scophthalmus_maximus
ENSCPBG00000010998	YARS	100	78.868	ENSSDUG00000001782	yars	100	78.868	Seriola_dumerili
ENSCPBG00000010998	YARS	100	79.735	ENSSLDG00000008268	yars	100	79.735	Seriola_lalandi_dorsalis
ENSCPBG00000010998	YARS	76	90.909	ENSSARG00000012227	-	72	90.909	Sorex_araneus
ENSCPBG00000010998	YARS	100	89.773	ENSSPUG00000000333	YARS	100	89.773	Sphenodon_punctatus
ENSCPBG00000010998	YARS	100	77.757	ENSSPAG00000020632	yars	100	74.151	Stegastes_partitus
ENSCPBG00000010998	YARS	100	86.553	ENSSSCG00000030369	YARS	100	86.553	Sus_scrofa
ENSCPBG00000010998	YARS	99	87.931	ENSTGUG00000001342	YARS	99	87.931	Taeniopygia_guttata
ENSCPBG00000010998	YARS	99	79.395	ENSTRUG00000014099	yars	99	79.395	Takifugu_rubripes
ENSCPBG00000010998	YARS	99	78.178	ENSTNIG00000009237	yars	99	78.178	Tetraodon_nigroviridis
ENSCPBG00000010998	YARS	96	77.407	ENSTBEG00000014374	YARS	100	77.407	Tupaia_belangeri
ENSCPBG00000010998	YARS	100	85.227	ENSTTRG00000014987	YARS	100	85.227	Tursiops_truncatus
ENSCPBG00000010998	YARS	100	83.333	ENSUAMG00000000392	YARS	100	80.492	Ursus_americanus
ENSCPBG00000010998	YARS	100	77.715	ENSUMAG00000008312	YARS	93	77.715	Ursus_maritimus
ENSCPBG00000010998	YARS	100	75.614	ENSVPAG00000010958	YARS	100	75.614	Vicugna_pacos
ENSCPBG00000010998	YARS	100	86.932	ENSVVUG00000015468	YARS	99	87.476	Vulpes_vulpes
ENSCPBG00000010998	YARS	100	79.545	ENSXETG00000027865	yars	100	79.545	Xenopus_tropicalis
ENSCPBG00000010998	YARS	95	77.535	ENSXMAG00000016348	yars	82	78.131	Xiphophorus_maculatus