EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPBG00000011175 (Gene tree)
Gene ID: 101945111
Gene Symbol: RPUSD4
Alias: FLJ14494
Full Name: RNA pseudouridine synthase D4
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Plus strand
Length: 4503 bases
Position: chrKK082980.1:2751941-2756443
Accession: 25898
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000015070	PseudoU_synth_2	PF00849.22	3.5e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000017856	RPUSD4-201	873	-	ENSCPBP00000015070	290 (aa)	-	-

Gene Model

Click here to download ENSCPBG00000011175's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000011175's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000011175	RPUSD4	98	69.123	ENSG00000165526	RPUSD4	75	68.881	Homo_sapiens
ENSCPBG00000011175	RPUSD4	99	53.287	ENSAPOG00000011024	rpusd4	72	53.287	Acanthochromis_polyacanthus
ENSCPBG00000011175	RPUSD4	99	67.483	ENSAMEG00000000127	-	75	67.483	Ailuropoda_melanoleuca
ENSCPBG00000011175	RPUSD4	98	64.567	ENSAMEG00000005953	-	87	64.567	Ailuropoda_melanoleuca
ENSCPBG00000011175	RPUSD4	98	54.167	ENSACIG00000003533	rpusd4	84	54.167	Amphilophus_citrinellus
ENSCPBG00000011175	RPUSD4	99	52.595	ENSAOCG00000015409	rpusd4	71	52.595	Amphiprion_ocellaris
ENSCPBG00000011175	RPUSD4	99	53.287	ENSAPEG00000018935	rpusd4	71	53.287	Amphiprion_percula
ENSCPBG00000011175	RPUSD4	99	54.325	ENSATEG00000008059	rpusd4	71	54.325	Anabas_testudineus
ENSCPBG00000011175	RPUSD4	96	73.835	ENSAPLG00000013250	RPUSD4	96	73.929	Anas_platyrhynchos
ENSCPBG00000011175	RPUSD4	99	76.042	ENSACAG00000000189	RPUSD4	79	76.042	Anolis_carolinensis
ENSCPBG00000011175	RPUSD4	98	67.719	ENSANAG00000024050	RPUSD4	76	67.719	Aotus_nancymaae
ENSCPBG00000011175	RPUSD4	99	54.671	ENSACLG00000020996	rpusd4	74	54.671	Astatotilapia_calliptera
ENSCPBG00000011175	RPUSD4	99	56.446	ENSAMXG00000031479	rpusd4	81	56.446	Astyanax_mexicanus
ENSCPBG00000011175	RPUSD4	99	66.434	ENSBTAG00000020900	RPUSD4	75	66.434	Bos_taurus
ENSCPBG00000011175	RPUSD4	98	68.662	ENSCJAG00000042850	RPUSD4	71	68.662	Callithrix_jacchus
ENSCPBG00000011175	RPUSD4	99	68.531	ENSCAFG00000010488	RPUSD4	75	68.531	Canis_familiaris
ENSCPBG00000011175	RPUSD4	99	68.531	ENSCAFG00020010621	RPUSD4	75	68.531	Canis_lupus_dingo
ENSCPBG00000011175	RPUSD4	99	65.385	ENSCHIG00000009975	RPUSD4	75	65.385	Capra_hircus
ENSCPBG00000011175	RPUSD4	99	69.580	ENSTSYG00000008456	RPUSD4	76	69.580	Carlito_syrichta
ENSCPBG00000011175	RPUSD4	86	62.097	ENSCAPG00000006040	RPUSD4	95	62.097	Cavia_aperea
ENSCPBG00000011175	RPUSD4	99	66.782	ENSCPOG00000014971	RPUSD4	77	66.782	Cavia_porcellus
ENSCPBG00000011175	RPUSD4	98	68.310	ENSCCAG00000027838	RPUSD4	76	68.310	Cebus_capucinus
ENSCPBG00000011175	RPUSD4	99	67.832	ENSCATG00000041570	RPUSD4	75	67.832	Cercocebus_atys
ENSCPBG00000011175	RPUSD4	99	67.820	ENSCLAG00000016553	RPUSD4	76	67.820	Chinchilla_lanigera
ENSCPBG00000011175	RPUSD4	99	68.881	ENSCSAG00000002274	RPUSD4	75	68.881	Chlorocebus_sabaeus
ENSCPBG00000011175	RPUSD4	93	67.778	ENSCHOG00000010249	RPUSD4	95	67.778	Choloepus_hoffmanni
ENSCPBG00000011175	RPUSD4	93	41.367	ENSCSAVG00000000872	-	54	41.367	Ciona_savignyi
ENSCPBG00000011175	RPUSD4	99	68.531	ENSCANG00000039684	RPUSD4	75	68.531	Colobus_angolensis_palliatus
ENSCPBG00000011175	RPUSD4	98	68.772	ENSCGRG00001024141	Rpusd4	75	68.772	Cricetulus_griseus_chok1gshd
ENSCPBG00000011175	RPUSD4	98	68.772	ENSCGRG00000014415	Rpusd4	75	68.772	Cricetulus_griseus_crigri
ENSCPBG00000011175	RPUSD4	99	56.747	ENSCVAG00000000392	rpusd4	81	56.747	Cyprinodon_variegatus
ENSCPBG00000011175	RPUSD4	99	56.401	ENSCVAG00000008761	rpusd4	73	56.401	Cyprinodon_variegatus
ENSCPBG00000011175	RPUSD4	98	53.147	ENSDARG00000012674	rpusd4	80	53.147	Danio_rerio
ENSCPBG00000011175	RPUSD4	99	68.182	ENSDNOG00000020026	RPUSD4	76	68.182	Dasypus_novemcinctus
ENSCPBG00000011175	RPUSD4	99	66.434	ENSDORG00000016717	Rpusd4	75	66.434	Dipodomys_ordii
ENSCPBG00000011175	RPUSD4	99	67.133	ENSETEG00000013953	RPUSD4	76	67.133	Echinops_telfairi
ENSCPBG00000011175	RPUSD4	99	66.434	ENSEASG00005022982	RPUSD4	75	66.434	Equus_asinus_asinus
ENSCPBG00000011175	RPUSD4	99	66.084	ENSECAG00000000557	RPUSD4	75	66.084	Equus_caballus
ENSCPBG00000011175	RPUSD4	74	76.923	ENSEEUG00000014036	RPUSD4	57	76.923	Erinaceus_europaeus
ENSCPBG00000011175	RPUSD4	99	59.582	ENSELUG00000008075	rpusd4	75	59.582	Esox_lucius
ENSCPBG00000011175	RPUSD4	99	68.531	ENSFCAG00000029789	RPUSD4	75	68.531	Felis_catus
ENSCPBG00000011175	RPUSD4	99	74.825	ENSFALG00000005171	RPUSD4	84	74.825	Ficedula_albicollis
ENSCPBG00000011175	RPUSD4	99	65.744	ENSFDAG00000014307	RPUSD4	77	65.744	Fukomys_damarensis
ENSCPBG00000011175	RPUSD4	99	55.363	ENSFHEG00000004329	rpusd4	74	55.363	Fundulus_heteroclitus
ENSCPBG00000011175	RPUSD4	98	51.568	ENSGMOG00000017726	rpusd4	85	51.568	Gadus_morhua
ENSCPBG00000011175	RPUSD4	96	75.269	ENSGALG00000024326	RPUSD4	79	75.357	Gallus_gallus
ENSCPBG00000011175	RPUSD4	99	52.595	ENSGAFG00000021559	rpusd4	73	52.595	Gambusia_affinis
ENSCPBG00000011175	RPUSD4	98	52.431	ENSGACG00000001657	rpusd4	96	51.079	Gasterosteus_aculeatus
ENSCPBG00000011175	RPUSD4	100	92.414	ENSGAGG00000000132	RPUSD4	81	92.414	Gopherus_agassizii
ENSCPBG00000011175	RPUSD4	99	68.881	ENSGGOG00000016494	RPUSD4	75	68.881	Gorilla_gorilla
ENSCPBG00000011175	RPUSD4	99	54.671	ENSHBUG00000022838	rpusd4	74	54.671	Haplochromis_burtoni
ENSCPBG00000011175	RPUSD4	99	66.782	ENSHGLG00000002285	RPUSD4	76	66.782	Heterocephalus_glaber_female
ENSCPBG00000011175	RPUSD4	99	66.782	ENSHGLG00100006385	RPUSD4	76	66.782	Heterocephalus_glaber_male
ENSCPBG00000011175	RPUSD4	99	54.671	ENSHCOG00000006612	rpusd4	74	54.671	Hippocampus_comes
ENSCPBG00000011175	RPUSD4	99	58.885	ENSIPUG00000023879	rusd4	74	58.885	Ictalurus_punctatus
ENSCPBG00000011175	RPUSD4	98	70.526	ENSSTOG00000025280	RPUSD4	78	70.526	Ictidomys_tridecemlineatus
ENSCPBG00000011175	RPUSD4	99	67.133	ENSJJAG00000018673	Rpusd4	77	67.133	Jaculus_jaculus
ENSCPBG00000011175	RPUSD4	99	56.207	ENSKMAG00000021805	rpusd4	75	56.207	Kryptolebias_marmoratus
ENSCPBG00000011175	RPUSD4	99	53.287	ENSLBEG00000020394	rpusd4	80	53.287	Labrus_bergylta
ENSCPBG00000011175	RPUSD4	99	67.596	ENSLACG00000011028	RPUSD4	73	67.596	Latimeria_chalumnae
ENSCPBG00000011175	RPUSD4	99	49.827	ENSLOCG00000003124	rpusd4	76	49.827	Lepisosteus_oculatus
ENSCPBG00000011175	RPUSD4	99	67.128	ENSLAFG00000005211	RPUSD4	100	57.877	Loxodonta_africana
ENSCPBG00000011175	RPUSD4	99	68.531	ENSMFAG00000039513	RPUSD4	75	68.531	Macaca_fascicularis
ENSCPBG00000011175	RPUSD4	99	68.881	ENSMMUG00000007933	RPUSD4	75	68.881	Macaca_mulatta
ENSCPBG00000011175	RPUSD4	99	68.531	ENSMNEG00000027414	RPUSD4	75	68.531	Macaca_nemestrina
ENSCPBG00000011175	RPUSD4	99	68.531	ENSMLEG00000042461	RPUSD4	75	68.531	Mandrillus_leucophaeus
ENSCPBG00000011175	RPUSD4	98	54.167	ENSMAMG00000023839	rpusd4	74	54.167	Mastacembelus_armatus
ENSCPBG00000011175	RPUSD4	99	54.671	ENSMZEG00005011999	rpusd4	74	54.671	Maylandia_zebra
ENSCPBG00000011175	RPUSD4	96	74.729	ENSMGAG00000000840	RPUSD4	87	75.000	Meleagris_gallopavo
ENSCPBG00000011175	RPUSD4	98	69.123	ENSMAUG00000010280	Rpusd4	75	69.123	Mesocricetus_auratus
ENSCPBG00000011175	RPUSD4	99	67.474	ENSMICG00000015979	RPUSD4	86	67.474	Microcebus_murinus
ENSCPBG00000011175	RPUSD4	98	67.719	ENSMOCG00000000661	Rpusd4	75	67.719	Microtus_ochrogaster
ENSCPBG00000011175	RPUSD4	99	52.595	ENSMMOG00000021731	rpusd4	85	52.595	Mola_mola
ENSCPBG00000011175	RPUSD4	93	71.375	ENSMODG00000004521	RPUSD4	69	71.375	Monodelphis_domestica
ENSCPBG00000011175	RPUSD4	99	52.234	ENSMALG00000005839	rpusd4	88	52.234	Monopterus_albus
ENSCPBG00000011175	RPUSD4	98	68.421	MGP_CAROLIEiJ_G0031954	Rpusd4	75	68.421	Mus_caroli
ENSCPBG00000011175	RPUSD4	98	67.719	ENSMUSG00000032044	Rpusd4	75	67.719	Mus_musculus
ENSCPBG00000011175	RPUSD4	98	69.123	MGP_PahariEiJ_G0014819	Rpusd4	75	69.123	Mus_pahari
ENSCPBG00000011175	RPUSD4	98	68.070	MGP_SPRETEiJ_G0033078	Rpusd4	75	68.070	Mus_spretus
ENSCPBG00000011175	RPUSD4	99	67.832	ENSMPUG00000006608	RPUSD4	76	67.832	Mustela_putorius_furo
ENSCPBG00000011175	RPUSD4	99	67.483	ENSMLUG00000017328	-	75	67.483	Myotis_lucifugus
ENSCPBG00000011175	RPUSD4	88	66.142	ENSMLUG00000029348	-	99	66.142	Myotis_lucifugus
ENSCPBG00000011175	RPUSD4	98	69.825	ENSNGAG00000020847	Rpusd4	75	69.825	Nannospalax_galili
ENSCPBG00000011175	RPUSD4	99	54.671	ENSNBRG00000005207	rpusd4	84	54.671	Neolamprologus_brichardi
ENSCPBG00000011175	RPUSD4	99	68.881	ENSNLEG00000007465	RPUSD4	75	68.881	Nomascus_leucogenys
ENSCPBG00000011175	RPUSD4	99	70.242	ENSMEUG00000004370	RPUSD4	77	70.242	Notamacropus_eugenii
ENSCPBG00000011175	RPUSD4	51	65.541	ENSOPRG00000013141	-	55	65.541	Ochotona_princeps
ENSCPBG00000011175	RPUSD4	99	66.436	ENSODEG00000004577	RPUSD4	76	66.436	Octodon_degus
ENSCPBG00000011175	RPUSD4	99	55.363	ENSONIG00000018879	rpusd4	78	55.363	Oreochromis_niloticus
ENSCPBG00000011175	RPUSD4	97	69.580	ENSOANG00000007247	RPUSD4	91	69.444	Ornithorhynchus_anatinus
ENSCPBG00000011175	RPUSD4	98	68.182	ENSOCUG00000017039	RPUSD4	76	68.182	Oryctolagus_cuniculus
ENSCPBG00000011175	RPUSD4	99	53.979	ENSORLG00000002750	rpusd4	80	53.979	Oryzias_latipes
ENSCPBG00000011175	RPUSD4	99	53.287	ENSORLG00020002044	rpusd4	72	53.287	Oryzias_latipes_hni
ENSCPBG00000011175	RPUSD4	99	53.979	ENSORLG00015020034	rpusd4	72	53.979	Oryzias_latipes_hsok
ENSCPBG00000011175	RPUSD4	99	54.671	ENSOMEG00000004861	rpusd4	71	54.671	Oryzias_melastigma
ENSCPBG00000011175	RPUSD4	99	69.896	ENSOGAG00000008922	RPUSD4	76	69.896	Otolemur_garnettii
ENSCPBG00000011175	RPUSD4	99	65.734	ENSOARG00000012238	RPUSD4	75	65.734	Ovis_aries
ENSCPBG00000011175	RPUSD4	99	68.881	ENSPPAG00000042883	RPUSD4	70	68.881	Pan_paniscus
ENSCPBG00000011175	RPUSD4	99	68.182	ENSPPRG00000003081	RPUSD4	75	68.182	Panthera_pardus
ENSCPBG00000011175	RPUSD4	99	68.182	ENSPTIG00000012059	RPUSD4	81	68.182	Panthera_tigris_altaica
ENSCPBG00000011175	RPUSD4	98	69.123	ENSPTRG00000004454	RPUSD4	75	69.123	Pan_troglodytes
ENSCPBG00000011175	RPUSD4	99	68.531	ENSPANG00000015040	RPUSD4	75	68.531	Papio_anubis
ENSCPBG00000011175	RPUSD4	99	65.854	ENSPKIG00000023986	rpusd4	74	65.854	Paramormyrops_kingsleyae
ENSCPBG00000011175	RPUSD4	100	86.897	ENSPSIG00000014268	RPUSD4	92	86.897	Pelodiscus_sinensis
ENSCPBG00000011175	RPUSD4	99	49.827	ENSPMGG00000002806	rpusd4	80	49.827	Periophthalmus_magnuspinnatus
ENSCPBG00000011175	RPUSD4	98	60.702	ENSPEMG00000000278	Rpusd4	74	60.702	Peromyscus_maniculatus_bairdii
ENSCPBG00000011175	RPUSD4	99	42.902	ENSPMAG00000008183	rpusd4	92	42.902	Petromyzon_marinus
ENSCPBG00000011175	RPUSD4	98	70.526	ENSPCIG00000010212	RPUSD4	78	70.526	Phascolarctos_cinereus
ENSCPBG00000011175	RPUSD4	99	52.921	ENSPFOG00000019030	rpusd4	76	52.921	Poecilia_formosa
ENSCPBG00000011175	RPUSD4	99	53.633	ENSPLAG00000016848	rpusd4	73	53.633	Poecilia_latipinna
ENSCPBG00000011175	RPUSD4	99	52.941	ENSPMEG00000017534	rpusd4	73	52.941	Poecilia_mexicana
ENSCPBG00000011175	RPUSD4	90	55.133	ENSPREG00000005689	rpusd4	68	55.133	Poecilia_reticulata
ENSCPBG00000011175	RPUSD4	99	69.231	ENSPPYG00000004043	RPUSD4	75	69.231	Pongo_abelii
ENSCPBG00000011175	RPUSD4	74	70.000	ENSPCAG00000000753	RPUSD4	58	70.000	Procavia_capensis
ENSCPBG00000011175	RPUSD4	99	60.900	ENSPCOG00000020694	RPUSD4	76	60.900	Propithecus_coquereli
ENSCPBG00000011175	RPUSD4	99	67.483	ENSPVAG00000000988	RPUSD4	76	67.483	Pteropus_vampyrus
ENSCPBG00000011175	RPUSD4	99	54.671	ENSPNYG00000009652	rpusd4	74	54.671	Pundamilia_nyererei
ENSCPBG00000011175	RPUSD4	99	54.704	ENSPNAG00000012264	rpusd4	76	54.704	Pygocentrus_nattereri
ENSCPBG00000011175	RPUSD4	98	68.421	ENSRNOG00000011567	Rpusd4	75	68.421	Rattus_norvegicus
ENSCPBG00000011175	RPUSD4	98	68.772	ENSRBIG00000034842	RPUSD4	75	68.531	Rhinopithecus_bieti
ENSCPBG00000011175	RPUSD4	98	68.772	ENSRROG00000039753	RPUSD4	75	68.531	Rhinopithecus_roxellana
ENSCPBG00000011175	RPUSD4	98	68.310	ENSSBOG00000030413	RPUSD4	76	68.310	Saimiri_boliviensis_boliviensis
ENSCPBG00000011175	RPUSD4	98	70.526	ENSSHAG00000008304	RPUSD4	94	70.526	Sarcophilus_harrisii
ENSCPBG00000011175	RPUSD4	99	62.369	ENSSFOG00015006203	rpusd4	78	62.369	Scleropages_formosus
ENSCPBG00000011175	RPUSD4	99	54.671	ENSSMAG00000020978	rpusd4	75	55.282	Scophthalmus_maximus
ENSCPBG00000011175	RPUSD4	99	52.249	ENSSDUG00000013399	rpusd4	76	52.249	Seriola_dumerili
ENSCPBG00000011175	RPUSD4	99	52.249	ENSSLDG00000023507	rpusd4	76	52.249	Seriola_lalandi_dorsalis
ENSCPBG00000011175	RPUSD4	96	77.419	ENSSPUG00000001401	RPUSD4	79	76.842	Sphenodon_punctatus
ENSCPBG00000011175	RPUSD4	98	54.861	ENSSPAG00000012163	rpusd4	73	54.861	Stegastes_partitus
ENSCPBG00000011175	RPUSD4	99	66.434	ENSSSCG00000015233	RPUSD4	76	66.434	Sus_scrofa
ENSCPBG00000011175	RPUSD4	98	72.632	ENSTGUG00000000773	RPUSD4	95	72.632	Taeniopygia_guttata
ENSCPBG00000011175	RPUSD4	100	52.218	ENSTRUG00000012283	rpusd4	75	52.218	Takifugu_rubripes
ENSCPBG00000011175	RPUSD4	98	52.778	ENSTNIG00000014676	rpusd4	73	52.778	Tetraodon_nigroviridis
ENSCPBG00000011175	RPUSD4	99	66.084	ENSTTRG00000001555	RPUSD4	76	66.084	Tursiops_truncatus
ENSCPBG00000011175	RPUSD4	51	63.265	ENSUAMG00000005500	-	91	63.265	Ursus_americanus
ENSCPBG00000011175	RPUSD4	99	67.832	ENSUMAG00000002219	RPUSD4	75	67.832	Ursus_maritimus
ENSCPBG00000011175	RPUSD4	65	68.783	ENSVPAG00000001066	RPUSD4	71	68.783	Vicugna_pacos
ENSCPBG00000011175	RPUSD4	99	68.182	ENSVVUG00000020101	RPUSD4	75	68.182	Vulpes_vulpes
ENSCPBG00000011175	RPUSD4	99	53.287	ENSXCOG00000004676	rpusd4	75	52.941	Xiphophorus_couchianus
ENSCPBG00000011175	RPUSD4	99	53.287	ENSXMAG00000023351	rpusd4	73	53.287	Xiphophorus_maculatus