EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000011236 (Gene tree)
Gene ID: 101940250
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Minus strand
Length: 6097 bases
Position: chrKK082935.1:1078306-1084402
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000015160	MMR_HSR1	PF01926.23	1.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000017967	-	1039	-	ENSCPBP00000015160	215 (aa)	XP_008167125	UPI00046C01C0

Gene Model

Click here to download ENSCPBG00000011236's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000011236's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000011236	-	76	34.337	ENSCPBG00000002289	RAB36	53	34.337
ENSCPBG00000011236	-	94	35.784	ENSCPBG00000025819	-	97	35.784
ENSCPBG00000011236	-	97	33.810	ENSCPBG00000025817	RAB25	95	33.810
ENSCPBG00000011236	-	73	39.130	ENSCPBG00000016033	RAB9A	73	39.130
ENSCPBG00000011236	-	90	39.594	ENSCPBG00000027605	RAB33B	85	39.594
ENSCPBG00000011236	-	87	41.398	ENSCPBG00000023254	RAB2A	87	41.398
ENSCPBG00000011236	-	75	34.161	ENSCPBG00000018286	RHEB	86	34.161
ENSCPBG00000011236	-	80	39.306	ENSCPBG00000015839	-	83	39.306
ENSCPBG00000011236	-	79	39.412	ENSCPBG00000028375	RAB12	71	38.286
ENSCPBG00000011236	-	82	38.710	ENSCPBG00000001542	RAB9B	91	38.710
ENSCPBG00000011236	-	77	43.976	ENSCPBG00000011914	RAB19	76	43.976
ENSCPBG00000011236	-	72	35.669	ENSCPBG00000020275	RAB34	60	35.669
ENSCPBG00000011236	-	88	35.979	ENSCPBG00000023927	RAB22A	94	35.979
ENSCPBG00000011236	-	85	38.798	ENSCPBG00000016907	RAB15	96	36.150
ENSCPBG00000011236	-	77	38.554	ENSCPBG00000027619	-	81	38.554
ENSCPBG00000011236	-	92	39.394	ENSCPBG00000013243	RAB1A	96	39.394
ENSCPBG00000011236	-	74	38.650	ENSCPBG00000014343	RAB7A	78	38.650
ENSCPBG00000011236	-	58	31.746	ENSCPBG00000016255	ARL4D	62	31.746
ENSCPBG00000011236	-	70	37.748	ENSCPBG00000009289	-	86	36.585
ENSCPBG00000011236	-	76	31.325	ENSCPBG00000028244	RERG	81	31.325
ENSCPBG00000011236	-	97	54.808	ENSCPBG00000011245	RAB42	99	54.589
ENSCPBG00000011236	-	98	36.967	ENSCPBG00000012631	RAB35	98	36.967
ENSCPBG00000011236	-	94	36.538	ENSCPBG00000017056	-	94	36.538
ENSCPBG00000011236	-	54	33.333	ENSCPBG00000011715	-	51	33.333
ENSCPBG00000011236	-	73	41.772	ENSCPBG00000000041	RAB6A	75	41.772
ENSCPBG00000011236	-	68	36.735	ENSCPBG00000022640	RAB23	66	35.849
ENSCPBG00000011236	-	99	31.308	ENSCPBG00000022721	RRAS2	96	31.308
ENSCPBG00000011236	-	97	35.981	ENSCPBG00000021406	RAB6B	94	35.981
ENSCPBG00000011236	-	73	40.764	ENSCPBG00000012712	RAB5B	72	40.764
ENSCPBG00000011236	-	73	34.568	ENSCPBG00000005866	RAB20	65	34.568
ENSCPBG00000011236	-	87	39.785	ENSCPBG00000012691	RAB2B	86	39.785
ENSCPBG00000011236	-	72	30.769	ENSCPBG00000013681	MRAS	80	30.952
ENSCPBG00000011236	-	91	35.385	ENSCPBG00000022559	RAB5A	89	35.385
ENSCPBG00000011236	-	83	41.011	ENSCPBG00000022446	RAB1B	88	41.011
ENSCPBG00000011236	-	79	34.320	ENSCPBG00000013941	-	95	33.516
ENSCPBG00000011236	-	93	39.234	ENSCPBG00000014614	RAB11A	96	39.234
ENSCPBG00000011236	-	81	30.726	ENSCPBG00000022284	DNAJC27	65	30.726
ENSCPBG00000011236	-	97	39.623	ENSCPBG00000014340	RAB41	93	39.623
ENSCPBG00000011236	-	88	39.474	ENSCPBG00000006855	RAB30	90	39.474
ENSCPBG00000011236	-	76	44.311	ENSCPBG00000012042	RAB33A	66	44.311
ENSCPBG00000011236	-	70	36.424	ENSCPBG00000016544	NRAS	85	35.366
ENSCPBG00000011236	-	53	33.628	ENSCPBG00000018802	-	85	33.333
ENSCPBG00000011236	-	70	35.762	ENSCPBG00000015094	-	87	34.756
ENSCPBG00000011236	-	100	55.349	ENSCPBG00000001057	RAB39B	100	55.349
ENSCPBG00000011236	-	98	38.863	ENSCPBG00000009941	RAB14	97	38.863

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000011236	-	99	59.556	ENSACIG00000016958	si:dkey-34d22.5	100	59.556	Amphilophus_citrinellus
ENSCPBG00000011236	-	90	65.990	ENSATEG00000010784	si:dkey-34d22.5	76	65.990	Anabas_testudineus
ENSCPBG00000011236	-	100	56.561	ENSCSEG00000019183	si:dkey-34d22.5	99	56.561	Cynoglossus_semilaevis
ENSCPBG00000011236	-	99	59.091	ENSCVAG00000017064	si:dkey-34d22.5	99	59.091	Cyprinodon_variegatus
ENSCPBG00000011236	-	85	43.956	ENSDARG00000100379	si:dkey-34d22.2	98	43.956	Danio_rerio
ENSCPBG00000011236	-	100	73.023	ENSFALG00000001373	-	100	73.023	Ficedula_albicollis
ENSCPBG00000011236	-	90	63.959	ENSFHEG00000012041	si:dkey-34d22.5	88	63.959	Fundulus_heteroclitus
ENSCPBG00000011236	-	100	70.833	ENSGALG00000000994	-	100	70.833	Gallus_gallus
ENSCPBG00000011236	-	90	62.437	ENSGAFG00000008183	si:dkey-34d22.5	89	62.437	Gambusia_affinis
ENSCPBG00000011236	-	94	97.537	ENSGAGG00000004918	-	100	97.537	Gopherus_agassizii
ENSCPBG00000011236	-	99	60.648	ENSHCOG00000015692	si:dkey-34d22.5	99	60.648	Hippocampus_comes
ENSCPBG00000011236	-	90	65.990	ENSKMAG00000012778	si:dkey-34d22.5	89	65.990	Kryptolebias_marmoratus
ENSCPBG00000011236	-	99	59.276	ENSLBEG00000002926	si:dkey-34d22.5	100	59.276	Labrus_bergylta
ENSCPBG00000011236	-	100	59.535	ENSLACG00000012674	si:dkey-34d22.5	100	59.535	Latimeria_chalumnae
ENSCPBG00000011236	-	100	63.721	ENSLOCG00000003467	si:dkey-34d22.5	100	63.721	Lepisosteus_oculatus
ENSCPBG00000011236	-	100	60.092	ENSMMOG00000006846	si:dkey-34d22.5	99	60.092	Mola_mola
ENSCPBG00000011236	-	99	59.459	ENSMALG00000013152	si:dkey-34d22.5	100	59.459	Monopterus_albus
ENSCPBG00000011236	-	99	60.092	ENSORLG00000014099	si:dkey-34d22.5	99	60.092	Oryzias_latipes
ENSCPBG00000011236	-	99	59.633	ENSORLG00020020277	si:dkey-34d22.5	99	59.633	Oryzias_latipes_hni
ENSCPBG00000011236	-	99	60.092	ENSORLG00015000142	si:dkey-34d22.5	99	60.092	Oryzias_latipes_hsok
ENSCPBG00000011236	-	90	64.975	ENSOMEG00000017958	si:dkey-34d22.5	99	60.000	Oryzias_melastigma
ENSCPBG00000011236	-	100	59.817	ENSPKIG00000021209	si:dkey-34d22.5	100	59.817	Paramormyrops_kingsleyae
ENSCPBG00000011236	-	93	92.500	ENSPSIG00000006606	-	99	92.500	Pelodiscus_sinensis
ENSCPBG00000011236	-	99	61.364	ENSPMGG00000001298	-	99	61.364	Periophthalmus_magnuspinnatus
ENSCPBG00000011236	-	100	66.667	ENSPCIG00000022399	-	97	66.667	Phascolarctos_cinereus
ENSCPBG00000011236	-	90	63.452	ENSPFOG00000014499	si:dkey-34d22.5	89	63.452	Poecilia_formosa
ENSCPBG00000011236	-	90	63.452	ENSPLAG00000007773	si:dkey-34d22.5	89	63.452	Poecilia_latipinna
ENSCPBG00000011236	-	90	63.452	ENSPMEG00000012932	si:dkey-34d22.5	89	63.452	Poecilia_mexicana
ENSCPBG00000011236	-	100	64.651	ENSSHAG00000008520	-	97	64.651	Sarcophilus_harrisii
ENSCPBG00000011236	-	99	60.930	ENSSFOG00015012088	rab42	96	60.930	Scleropages_formosus
ENSCPBG00000011236	-	100	60.181	ENSSLDG00000002646	si:dkey-34d22.5	99	60.181	Seriola_lalandi_dorsalis
ENSCPBG00000011236	-	99	60.455	ENSSPAG00000012955	si:dkey-34d22.5	99	60.455	Stegastes_partitus
ENSCPBG00000011236	-	100	48.148	ENSXETG00000020622	rab39a	100	48.148	Xenopus_tropicalis
ENSCPBG00000011236	-	91	62.814	ENSXCOG00000008410	si:dkey-34d22.5	90	62.814	Xiphophorus_couchianus
ENSCPBG00000011236	-	91	62.814	ENSXMAG00000029317	si:dkey-34d22.5	90	62.814	Xiphophorus_maculatus