EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000011277 (Gene tree)
Gene ID: 101952644
Gene Symbol: PATZ1
Alias: MAZR|PATZ|RIAZ|ZBTB19|ZNF278|ZSG|dJ400N23
Full Name: POZ/BTB and AT hook containing zinc finger 1
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Plus strand
Length: 22111 bases
Position: chrKK083009.1:2326059-2348169
Accession: 13071
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000015219	zf-C2H2	PF00096.26	1.9e-27	1	5
ENSCPBP00000015219	zf-C2H2	PF00096.26	1.9e-27	2	5
ENSCPBP00000015219	zf-C2H2	PF00096.26	1.9e-27	3	5
ENSCPBP00000015219	zf-C2H2	PF00096.26	1.9e-27	4	5
ENSCPBP00000015219	zf-C2H2	PF00096.26	1.9e-27	5	5
ENSCPBP00000015217	zf-C2H2	PF00096.26	1.8e-26	1	5
ENSCPBP00000015217	zf-C2H2	PF00096.26	1.8e-26	2	5
ENSCPBP00000015217	zf-C2H2	PF00096.26	1.8e-26	3	5
ENSCPBP00000015217	zf-C2H2	PF00096.26	1.8e-26	4	5
ENSCPBP00000015217	zf-C2H2	PF00096.26	1.8e-26	5	5
ENSCPBP00000015216	zf-C2H2	PF00096.26	2.1e-26	1	5
ENSCPBP00000015216	zf-C2H2	PF00096.26	2.1e-26	2	5
ENSCPBP00000015216	zf-C2H2	PF00096.26	2.1e-26	3	5
ENSCPBP00000015216	zf-C2H2	PF00096.26	2.1e-26	4	5
ENSCPBP00000015216	zf-C2H2	PF00096.26	2.1e-26	5	5
ENSCPBP00000015221	zf-C2H2	PF00096.26	4.2e-20	1	4
ENSCPBP00000015221	zf-C2H2	PF00096.26	4.2e-20	2	4
ENSCPBP00000015221	zf-C2H2	PF00096.26	4.2e-20	3	4
ENSCPBP00000015221	zf-C2H2	PF00096.26	4.2e-20	4	4
ENSCPBP00000015219	zf-met	PF12874.7	2.7e-11	1	1
ENSCPBP00000015217	zf-met	PF12874.7	5.5e-11	1	1
ENSCPBP00000015216	zf-met	PF12874.7	6.3e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000018037	PATZ1-203	2407	-	ENSCPBP00000015219	684 (aa)	XP_005288704	UPI000389119B
ENSCPBT00000018035	PATZ1-202	2479	-	ENSCPBP00000015217	708 (aa)	XP_005288703	UPI000388F5DA
ENSCPBT00000018034	PATZ1-201	2515	-	ENSCPBP00000015216	720 (aa)	XP_005288702	UPI000388DE20
ENSCPBT00000018039	PATZ1-204	2341	-	ENSCPBP00000015221	662 (aa)	-	-

Gene Model

Click here to download ENSCPBG00000011277's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000011277's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000011277	PATZ1	73	37.037	ENSCPBG00000006929	ZBTB14	94	37.963

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000011277	PATZ1	100	89.130	ENSG00000100105	PATZ1	100	88.986	Homo_sapiens
ENSCPBG00000011277	PATZ1	100	58.106	ENSAPOG00000018447	patz1	100	59.208	Acanthochromis_polyacanthus
ENSCPBG00000011277	PATZ1	100	88.841	ENSAMEG00000007074	PATZ1	100	89.275	Ailuropoda_melanoleuca
ENSCPBG00000011277	PATZ1	100	57.444	ENSACIG00000016779	patz1	100	57.022	Amphilophus_citrinellus
ENSCPBG00000011277	PATZ1	100	57.902	ENSAPEG00000013354	patz1	100	57.483	Amphiprion_percula
ENSCPBG00000011277	PATZ1	100	57.865	ENSATEG00000011260	patz1	100	57.584	Anabas_testudineus
ENSCPBG00000011277	PATZ1	85	97.064	ENSAPLG00000003934	PATZ1	99	97.064	Anas_platyrhynchos
ENSCPBG00000011277	PATZ1	100	89.130	ENSANAG00000029603	PATZ1	100	88.986	Aotus_nancymaae
ENSCPBG00000011277	PATZ1	99	61.255	ENSAMXG00000002273	patz1	99	61.142	Astyanax_mexicanus
ENSCPBG00000011277	PATZ1	100	88.116	ENSBTAG00000005478	PATZ1	100	89.130	Bos_taurus
ENSCPBG00000011277	PATZ1	100	89.130	ENSCJAG00000010978	PATZ1	100	88.986	Callithrix_jacchus
ENSCPBG00000011277	PATZ1	100	88.261	ENSCAFG00000013087	PATZ1	100	89.275	Canis_familiaris
ENSCPBG00000011277	PATZ1	100	88.116	ENSCHIG00000020203	PATZ1	100	88.841	Capra_hircus
ENSCPBG00000011277	PATZ1	100	89.130	ENSTSYG00000033183	PATZ1	100	88.986	Carlito_syrichta
ENSCPBG00000011277	PATZ1	100	89.130	ENSCCAG00000028772	PATZ1	100	88.986	Cebus_capucinus
ENSCPBG00000011277	PATZ1	100	89.565	ENSCATG00000006101	PATZ1	100	88.986	Cercocebus_atys
ENSCPBG00000011277	PATZ1	100	89.565	ENSCANG00000024972	PATZ1	100	88.986	Colobus_angolensis_palliatus
ENSCPBG00000011277	PATZ1	100	86.957	ENSCGRG00001004071	Patz1	100	87.246	Cricetulus_griseus_chok1gshd
ENSCPBG00000011277	PATZ1	93	88.199	ENSCGRG00000004814	Patz1	100	88.509	Cricetulus_griseus_crigri
ENSCPBG00000011277	PATZ1	100	55.062	ENSCSEG00000001385	patz1	100	54.910	Cynoglossus_semilaevis
ENSCPBG00000011277	PATZ1	100	57.143	ENSCVAG00000007684	patz1	100	57.504	Cyprinodon_variegatus
ENSCPBG00000011277	PATZ1	99	57.576	ENSDARG00000076584	patz1	99	56.749	Danio_rerio
ENSCPBG00000011277	PATZ1	90	86.977	ENSDNOG00000003183	PATZ1	100	87.781	Dasypus_novemcinctus
ENSCPBG00000011277	PATZ1	100	88.406	ENSDORG00000023834	Patz1	100	89.420	Dipodomys_ordii
ENSCPBG00000011277	PATZ1	100	88.986	ENSECAG00000025030	PATZ1	100	89.275	Equus_caballus
ENSCPBG00000011277	PATZ1	100	59.898	ENSELUG00000002333	patz1	100	55.571	Esox_lucius
ENSCPBG00000011277	PATZ1	100	88.261	ENSFCAG00000030253	PATZ1	100	89.275	Felis_catus
ENSCPBG00000011277	PATZ1	85	97.774	ENSFALG00000007450	PATZ1	99	97.774	Ficedula_albicollis
ENSCPBG00000011277	PATZ1	96	85.671	ENSFDAG00000005614	PATZ1	100	86.576	Fukomys_damarensis
ENSCPBG00000011277	PATZ1	100	57.302	ENSFHEG00000014755	patz1	100	56.885	Fundulus_heteroclitus
ENSCPBG00000011277	PATZ1	98	55.076	ENSGMOG00000001062	patz1	98	54.683	Gadus_morhua
ENSCPBG00000011277	PATZ1	100	95.518	ENSGALG00000006934	PATZ1	100	95.518	Gallus_gallus
ENSCPBG00000011277	PATZ1	100	56.506	ENSGAFG00000010053	patz1	100	56.890	Gambusia_affinis
ENSCPBG00000011277	PATZ1	85	99.502	ENSGAGG00000003214	PATZ1	100	99.502	Gopherus_agassizii
ENSCPBG00000011277	PATZ1	100	89.275	ENSGGOG00000017171	PATZ1	100	89.130	Gorilla_gorilla
ENSCPBG00000011277	PATZ1	98	59.125	ENSHCOG00000017644	patz1	98	52.995	Hippocampus_comes
ENSCPBG00000011277	PATZ1	99	57.089	ENSIPUG00000017653	patz1	99	53.408	Ictalurus_punctatus
ENSCPBG00000011277	PATZ1	100	88.116	ENSSTOG00000020707	PATZ1	100	89.130	Ictidomys_tridecemlineatus
ENSCPBG00000011277	PATZ1	100	87.391	ENSJJAG00000015259	Patz1	100	87.391	Jaculus_jaculus
ENSCPBG00000011277	PATZ1	100	57.407	ENSKMAG00000008157	patz1	100	57.082	Kryptolebias_marmoratus
ENSCPBG00000011277	PATZ1	100	88.696	ENSLAFG00000002317	PATZ1	100	88.986	Loxodonta_africana
ENSCPBG00000011277	PATZ1	100	89.565	ENSMFAG00000040968	PATZ1	100	88.986	Macaca_fascicularis
ENSCPBG00000011277	PATZ1	100	89.565	ENSMNEG00000037588	PATZ1	100	88.986	Macaca_nemestrina
ENSCPBG00000011277	PATZ1	100	89.565	ENSMLEG00000030938	PATZ1	100	88.986	Mandrillus_leucophaeus
ENSCPBG00000011277	PATZ1	100	57.531	ENSMAMG00000023652	patz1	100	57.123	Mastacembelus_armatus
ENSCPBG00000011277	PATZ1	85	93.448	ENSMGAG00000008439	PATZ1	100	93.448	Meleagris_gallopavo
ENSCPBG00000011277	PATZ1	100	88.696	ENSMAUG00000004129	Patz1	100	88.696	Mesocricetus_auratus
ENSCPBG00000011277	PATZ1	100	89.420	ENSMICG00000005430	PATZ1	100	89.275	Microcebus_murinus
ENSCPBG00000011277	PATZ1	100	88.551	ENSMOCG00000014488	Patz1	100	88.841	Microtus_ochrogaster
ENSCPBG00000011277	PATZ1	100	52.996	ENSMMOG00000021679	patz1	69	54.707	Mola_mola
ENSCPBG00000011277	PATZ1	100	57.062	ENSMALG00000021172	patz1	100	56.497	Monopterus_albus
ENSCPBG00000011277	PATZ1	100	88.406	MGP_CAROLIEiJ_G0016007	Patz1	100	88.696	Mus_caroli
ENSCPBG00000011277	PATZ1	100	88.551	ENSMUSG00000020453	Patz1	100	88.841	Mus_musculus
ENSCPBG00000011277	PATZ1	100	88.551	MGP_PahariEiJ_G0016884	Patz1	100	88.841	Mus_pahari
ENSCPBG00000011277	PATZ1	100	88.551	MGP_SPRETEiJ_G0016846	Patz1	100	88.841	Mus_spretus
ENSCPBG00000011277	PATZ1	100	88.551	ENSMLUG00000009942	PATZ1	100	89.130	Myotis_lucifugus
ENSCPBG00000011277	PATZ1	100	88.841	ENSNGAG00000010268	Patz1	100	89.130	Nannospalax_galili
ENSCPBG00000011277	PATZ1	100	57.865	ENSNBRG00000016032	patz1	100	57.865	Neolamprologus_brichardi
ENSCPBG00000011277	PATZ1	68	93.548	ENSMEUG00000016293	PATZ1	100	93.548	Notamacropus_eugenii
ENSCPBG00000011277	PATZ1	100	88.696	ENSODEG00000003589	PATZ1	100	88.696	Octodon_degus
ENSCPBG00000011277	PATZ1	100	56.084	ENSONIG00000004248	patz1	100	55.524	Oreochromis_niloticus
ENSCPBG00000011277	PATZ1	100	89.565	ENSOANG00000014654	PATZ1	100	89.855	Ornithorhynchus_anatinus
ENSCPBG00000011277	PATZ1	100	56.414	ENSORLG00020010937	patz1	100	55.831	Oryzias_latipes_hni
ENSCPBG00000011277	PATZ1	100	55.735	ENSORLG00015007396	patz1	100	55.466	Oryzias_latipes_hsok
ENSCPBG00000011277	PATZ1	100	57.985	ENSOMEG00000006636	patz1	100	55.319	Oryzias_melastigma
ENSCPBG00000011277	PATZ1	100	89.130	ENSOGAG00000027905	PATZ1	100	88.986	Otolemur_garnettii
ENSCPBG00000011277	PATZ1	100	89.275	ENSPPAG00000033227	PATZ1	100	89.130	Pan_paniscus
ENSCPBG00000011277	PATZ1	100	88.261	ENSPPRG00000001573	PATZ1	100	89.275	Panthera_pardus
ENSCPBG00000011277	PATZ1	85	91.141	ENSPTIG00000007937	PATZ1	90	92.164	Panthera_tigris_altaica
ENSCPBG00000011277	PATZ1	100	89.275	ENSPTRG00000014268	PATZ1	100	89.130	Pan_troglodytes
ENSCPBG00000011277	PATZ1	100	89.565	ENSPANG00000006821	PATZ1	100	88.986	Papio_anubis
ENSCPBG00000011277	PATZ1	100	62.088	ENSPKIG00000019584	patz1	100	61.905	Paramormyrops_kingsleyae
ENSCPBG00000011277	PATZ1	60	90.686	ENSPSIG00000016553	-	91	90.686	Pelodiscus_sinensis
ENSCPBG00000011277	PATZ1	58	99.495	ENSPSIG00000011562	-	100	99.495	Pelodiscus_sinensis
ENSCPBG00000011277	PATZ1	100	57.264	ENSPMGG00000010196	patz1	100	56.841	Periophthalmus_magnuspinnatus
ENSCPBG00000011277	PATZ1	100	88.551	ENSPEMG00000005321	Patz1	100	88.696	Peromyscus_maniculatus_bairdii
ENSCPBG00000011277	PATZ1	100	55.853	ENSPLAG00000010425	patz1	100	57.307	Poecilia_latipinna
ENSCPBG00000011277	PATZ1	100	56.073	ENSPMEG00000000255	patz1	100	55.304	Poecilia_mexicana
ENSCPBG00000011277	PATZ1	100	57.221	ENSPREG00000002440	patz1	100	56.474	Poecilia_reticulata
ENSCPBG00000011277	PATZ1	100	89.275	ENSPPYG00000011732	PATZ1	100	89.130	Pongo_abelii
ENSCPBG00000011277	PATZ1	100	89.275	ENSPCOG00000019729	PATZ1	100	89.130	Propithecus_coquereli
ENSCPBG00000011277	PATZ1	100	88.551	ENSPVAG00000001749	PATZ1	100	89.130	Pteropus_vampyrus
ENSCPBG00000011277	PATZ1	100	58.391	ENSPNYG00000013542	patz1	100	58.391	Pundamilia_nyererei
ENSCPBG00000011277	PATZ1	84	59.150	ENSPNAG00000017222	patz1	99	59.150	Pygocentrus_nattereri
ENSCPBG00000011277	PATZ1	100	89.565	ENSRBIG00000044231	PATZ1	100	88.986	Rhinopithecus_bieti
ENSCPBG00000011277	PATZ1	100	89.565	ENSRROG00000037155	PATZ1	100	88.986	Rhinopithecus_roxellana
ENSCPBG00000011277	PATZ1	100	89.130	ENSSBOG00000003894	PATZ1	100	88.986	Saimiri_boliviensis_boliviensis
ENSCPBG00000011277	PATZ1	81	76.667	ENSSFOG00015013244	patz1	78	76.667	Scleropages_formosus
ENSCPBG00000011277	PATZ1	100	94.571	ENSSPUG00000015298	PATZ1	100	94.571	Sphenodon_punctatus
ENSCPBG00000011277	PATZ1	85	90.566	ENSSSCG00000010027	PATZ1	100	91.595	Sus_scrofa
ENSCPBG00000011277	PATZ1	100	58.140	ENSTRUG00000015366	patz1	100	57.592	Takifugu_rubripes
ENSCPBG00000011277	PATZ1	100	88.116	ENSTTRG00000010279	PATZ1	100	89.130	Tursiops_truncatus
ENSCPBG00000011277	PATZ1	100	84.581	ENSUAMG00000015014	PATZ1	100	85.629	Ursus_americanus
ENSCPBG00000011277	PATZ1	100	72.965	ENSXETG00000004190	patz1	100	72.238	Xenopus_tropicalis
ENSCPBG00000011277	PATZ1	100	57.063	ENSXMAG00000015531	patz1	100	56.052	Xiphophorus_maculatus