EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCPBG00000011331 (Gene tree)
Gene ID: 101936516
Gene Symbol: POP5
Alias: -
Full Name: POP5 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Plus strand
Length: 26270 bases
Position: chrKK083009.1:2773837-2800106
Accession: 17689
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000015314	RNase_P_Rpp14	PF01900.19	4.8e-27	1	1
ENSCPBP00000015312	RNase_P_Rpp14	PF01900.19	8e-27	1	1
ENSCPBP00000015309	RNase_P_Rpp14	PF01900.19	1.1e-26	1	1
ENSCPBP00000015308	RNase_P_Rpp14	PF01900.19	1.1e-26	1	1
ENSCPBP00000015311	RNase_P_Rpp14	PF01900.19	1.3e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000018136	POP5-202	1515	-	ENSCPBP00000015309	217 (aa)	XP_005288733	UPI0003890ED6
ENSCPBT00000018141	POP5-205	917	-	ENSCPBP00000015314	168 (aa)	XP_005288735	UPI000388F020
ENSCPBT00000018135	POP5-201	1931	-	ENSCPBP00000015308	217 (aa)	-	-
ENSCPBT00000018138	POP5-203	1221	-	ENSCPBP00000015311	248 (aa)	-	-
ENSCPBT00000018139	POP5-204	1050	-	ENSCPBP00000015312	191 (aa)	-	-

Gene Model

Click here to download ENSCPBG00000011331's gene model file

Pathways

Pathway ID	Pathway Name	Source
cpic03008	Ribosome biogenesis in eukaryotes	KEGG
cpic03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000011331's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000011331	POP5	88	72.109	ENSG00000167272	POP5	100	68.675	Homo_sapiens
ENSCPBG00000011331	POP5	88	60.135	ENSAPOG00000023686	POP5	100	56.886	Acanthochromis_polyacanthus
ENSCPBG00000011331	POP5	95	66.667	ENSAMEG00000008503	POP5	96	66.667	Ailuropoda_melanoleuca
ENSCPBG00000011331	POP5	88	63.265	ENSACIG00000018362	pop5	100	60.843	Amphilophus_citrinellus
ENSCPBG00000011331	POP5	91	58.170	ENSAOCG00000001930	pop5	100	56.886	Amphiprion_ocellaris
ENSCPBG00000011331	POP5	91	58.170	ENSAPEG00000006795	pop5	100	56.886	Amphiprion_percula
ENSCPBG00000011331	POP5	93	58.333	ENSATEG00000016792	pop5	99	56.970	Anabas_testudineus
ENSCPBG00000011331	POP5	55	76.344	ENSAPLG00000015761	POP5	98	72.477	Anas_platyrhynchos
ENSCPBG00000011331	POP5	100	65.476	ENSACAG00000003091	POP5	100	65.476	Anolis_carolinensis
ENSCPBG00000011331	POP5	88	70.748	ENSANAG00000023744	POP5	98	68.750	Aotus_nancymaae
ENSCPBG00000011331	POP5	90	60.526	ENSACLG00000021131	-	99	59.036	Astatotilapia_calliptera
ENSCPBG00000011331	POP5	90	51.316	ENSAMXG00000038175	pop5	98	48.521	Astyanax_mexicanus
ENSCPBG00000011331	POP5	96	68.293	ENSBTAG00000005385	POP5	96	68.293	Bos_taurus
ENSCPBG00000011331	POP5	88	72.109	ENSCJAG00000001309	POP5	98	70.000	Callithrix_jacchus
ENSCPBG00000011331	POP5	96	67.683	ENSCAFG00000010389	POP5	96	67.683	Canis_familiaris
ENSCPBG00000011331	POP5	96	67.683	ENSCAFG00020020663	POP5	96	67.683	Canis_lupus_dingo
ENSCPBG00000011331	POP5	96	68.902	ENSCHIG00000016402	POP5	96	68.902	Capra_hircus
ENSCPBG00000011331	POP5	99	64.671	ENSTSYG00000027616	POP5	100	65.680	Carlito_syrichta
ENSCPBG00000011331	POP5	66	68.142	ENSCAPG00000016873	POP5	100	68.142	Cavia_aperea
ENSCPBG00000011331	POP5	99	64.881	ENSCPOG00000012337	POP5	100	64.881	Cavia_porcellus
ENSCPBG00000011331	POP5	88	72.789	ENSCCAG00000023154	POP5	98	70.625	Cebus_capucinus
ENSCPBG00000011331	POP5	88	72.109	ENSCATG00000036825	POP5	100	68.072	Cercocebus_atys
ENSCPBG00000011331	POP5	96	68.098	ENSCLAG00000007808	POP5	96	68.098	Chinchilla_lanigera
ENSCPBG00000011331	POP5	88	72.109	ENSCSAG00000002246	POP5	100	68.675	Chlorocebus_sabaeus
ENSCPBG00000011331	POP5	85	62.676	ENSCHOG00000013969	POP5	96	60.366	Choloepus_hoffmanni
ENSCPBG00000011331	POP5	88	71.429	ENSCANG00000028001	POP5	98	68.750	Colobus_angolensis_palliatus
ENSCPBG00000011331	POP5	96	68.098	ENSCGRG00001017974	Pop5	96	68.098	Cricetulus_griseus_chok1gshd
ENSCPBG00000011331	POP5	96	68.098	ENSCGRG00000010102	Pop5	96	68.098	Cricetulus_griseus_crigri
ENSCPBG00000011331	POP5	88	55.782	ENSCSEG00000008332	-	98	53.049	Cynoglossus_semilaevis
ENSCPBG00000011331	POP5	82	58.394	ENSCSEG00000011103	pop5	97	55.172	Cynoglossus_semilaevis
ENSCPBG00000011331	POP5	91	41.558	ENSCVAG00000009152	-	91	41.558	Cyprinodon_variegatus
ENSCPBG00000011331	POP5	91	53.548	ENSDARG00000053452	pop5	100	50.888	Danio_rerio
ENSCPBG00000011331	POP5	85	70.423	ENSDNOG00000045952	-	99	66.071	Dasypus_novemcinctus
ENSCPBG00000011331	POP5	85	68.750	ENSDNOG00000012668	-	89	64.706	Dasypus_novemcinctus
ENSCPBG00000011331	POP5	99	66.667	ENSDORG00000029401	Pop5	100	67.262	Dipodomys_ordii
ENSCPBG00000011331	POP5	85	32.168	FBgn0036696	CG14057	96	32.168	Drosophila_melanogaster
ENSCPBG00000011331	POP5	99	62.500	ENSETEG00000009283	POP5	99	62.500	Echinops_telfairi
ENSCPBG00000011331	POP5	88	44.218	ENSEBUG00000016369	pop5	90	44.218	Eptatretus_burgeri
ENSCPBG00000011331	POP5	87	68.493	ENSEASG00005004714	POP5	96	66.463	Equus_asinus_asinus
ENSCPBG00000011331	POP5	87	68.493	ENSECAG00000010012	POP5	96	66.463	Equus_caballus
ENSCPBG00000011331	POP5	96	59.877	ENSELUG00000023394	pop5	100	59.877	Esox_lucius
ENSCPBG00000011331	POP5	96	66.463	ENSFCAG00000042614	POP5	96	66.463	Felis_catus
ENSCPBG00000011331	POP5	93	78.344	ENSFALG00000007537	POP5	100	77.647	Ficedula_albicollis
ENSCPBG00000011331	POP5	99	65.868	ENSFDAG00000009972	POP5	99	65.868	Fukomys_damarensis
ENSCPBG00000011331	POP5	96	55.488	ENSFHEG00000022341	pop5	99	55.488	Fundulus_heteroclitus
ENSCPBG00000011331	POP5	78	58.779	ENSGMOG00000001073	pop5	99	58.779	Gadus_morhua
ENSCPBG00000011331	POP5	90	71.523	ENSGALG00000007124	POP5	57	70.122	Gallus_gallus
ENSCPBG00000011331	POP5	88	62.585	ENSGAFG00000005937	-	100	57.485	Gambusia_affinis
ENSCPBG00000011331	POP5	97	54.601	ENSGACG00000012710	-	100	54.601	Gasterosteus_aculeatus
ENSCPBG00000011331	POP5	100	95.833	ENSGAGG00000016005	POP5	100	95.833	Gopherus_agassizii
ENSCPBG00000011331	POP5	88	72.109	ENSGGOG00000013505	POP5	100	68.675	Gorilla_gorilla
ENSCPBG00000011331	POP5	90	59.868	ENSHBUG00000011718	-	99	58.434	Haplochromis_burtoni
ENSCPBG00000011331	POP5	99	65.476	ENSHGLG00000011786	POP5	100	65.476	Heterocephalus_glaber_female
ENSCPBG00000011331	POP5	99	65.476	ENSHGLG00100014284	POP5	100	65.476	Heterocephalus_glaber_male
ENSCPBG00000011331	POP5	88	55.782	ENSHCOG00000011809	pop5	99	53.086	Hippocampus_comes
ENSCPBG00000011331	POP5	89	52.349	ENSIPUG00000003437	pop5	100	49.102	Ictalurus_punctatus
ENSCPBG00000011331	POP5	96	67.485	ENSSTOG00000012577	POP5	96	67.485	Ictidomys_tridecemlineatus
ENSCPBG00000011331	POP5	85	70.423	ENSJJAG00000001080	Pop5	100	64.118	Jaculus_jaculus
ENSCPBG00000011331	POP5	88	61.224	ENSKMAG00000011158	-	99	57.143	Kryptolebias_marmoratus
ENSCPBG00000011331	POP5	93	54.487	ENSLBEG00000008652	pop5	91	53.293	Labrus_bergylta
ENSCPBG00000011331	POP5	96	66.049	ENSLACG00000018188	POP5	99	66.049	Latimeria_chalumnae
ENSCPBG00000011331	POP5	88	58.784	ENSLOCG00000002924	pop5	98	55.758	Lepisosteus_oculatus
ENSCPBG00000011331	POP5	98	63.473	ENSLAFG00000014545	POP5	98	63.473	Loxodonta_africana
ENSCPBG00000011331	POP5	88	72.109	ENSMFAG00000045933	POP5	97	71.895	Macaca_fascicularis
ENSCPBG00000011331	POP5	88	72.109	ENSMMUG00000040120	POP5	100	68.675	Macaca_mulatta
ENSCPBG00000011331	POP5	88	72.109	ENSMNEG00000041716	POP5	100	68.675	Macaca_nemestrina
ENSCPBG00000011331	POP5	88	71.429	ENSMLEG00000029377	POP5	100	68.072	Mandrillus_leucophaeus
ENSCPBG00000011331	POP5	88	59.864	ENSMAMG00000002108	pop5	100	55.689	Mastacembelus_armatus
ENSCPBG00000011331	POP5	90	59.868	ENSMZEG00005000069	-	99	58.434	Maylandia_zebra
ENSCPBG00000011331	POP5	96	66.871	ENSMAUG00000019670	Pop5	96	66.871	Mesocricetus_auratus
ENSCPBG00000011331	POP5	96	67.683	ENSMICG00000008692	POP5	96	68.902	Microcebus_murinus
ENSCPBG00000011331	POP5	99	61.078	ENSMOCG00000013322	Pop5	99	61.078	Microtus_ochrogaster
ENSCPBG00000011331	POP5	83	58.571	ENSMMOG00000010471	pop5	95	55.128	Mola_mola
ENSCPBG00000011331	POP5	96	71.605	ENSMODG00000003066	POP5	66	71.605	Monodelphis_domestica
ENSCPBG00000011331	POP5	88	61.905	ENSMALG00000017797	-	99	59.394	Monopterus_albus
ENSCPBG00000011331	POP5	96	67.485	MGP_CAROLIEiJ_G0027618	Pop5	96	67.485	Mus_caroli
ENSCPBG00000011331	POP5	96	67.485	ENSMUSG00000060152	Pop5	96	67.485	Mus_musculus
ENSCPBG00000011331	POP5	96	66.258	MGP_PahariEiJ_G0024198	Pop5	96	66.258	Mus_pahari
ENSCPBG00000011331	POP5	96	66.871	MGP_SPRETEiJ_G0028616	Pop5	96	66.871	Mus_spretus
ENSCPBG00000011331	POP5	89	68.456	ENSMPUG00000003221	POP5	96	66.871	Mustela_putorius_furo
ENSCPBG00000011331	POP5	96	65.854	ENSMLUG00000014657	POP5	98	65.854	Myotis_lucifugus
ENSCPBG00000011331	POP5	87	71.233	ENSNGAG00000002594	Pop5	96	68.902	Nannospalax_galili
ENSCPBG00000011331	POP5	67	59.821	ENSNBRG00000001020	-	83	59.821	Neolamprologus_brichardi
ENSCPBG00000011331	POP5	88	72.109	ENSNLEG00000015839	POP5	100	68.072	Nomascus_leucogenys
ENSCPBG00000011331	POP5	96	70.186	ENSMEUG00000015288	POP5	97	70.186	Notamacropus_eugenii
ENSCPBG00000011331	POP5	87	71.233	ENSOPRG00000004327	POP5	96	67.879	Ochotona_princeps
ENSCPBG00000011331	POP5	95	61.250	ENSODEG00000010351	-	96	61.250	Octodon_degus
ENSCPBG00000011331	POP5	87	68.493	ENSODEG00000006549	-	96	67.485	Octodon_degus
ENSCPBG00000011331	POP5	90	60.526	ENSONIG00000011172	pop5	99	59.036	Oreochromis_niloticus
ENSCPBG00000011331	POP5	54	78.022	ENSOANG00000001792	-	95	73.148	Ornithorhynchus_anatinus
ENSCPBG00000011331	POP5	96	67.683	ENSOCUG00000006537	POP5	98	66.071	Oryctolagus_cuniculus
ENSCPBG00000011331	POP5	97	49.693	ENSORLG00000014745	pop5	98	49.693	Oryzias_latipes
ENSCPBG00000011331	POP5	97	50.000	ENSORLG00020001168	pop5	98	50.000	Oryzias_latipes_hni
ENSCPBG00000011331	POP5	97	48.795	ENSORLG00015013535	pop5	98	48.795	Oryzias_latipes_hsok
ENSCPBG00000011331	POP5	88	55.102	ENSOMEG00000017643	pop5	96	52.174	Oryzias_melastigma
ENSCPBG00000011331	POP5	89	69.128	ENSOGAG00000008528	POP5	91	69.128	Otolemur_garnettii
ENSCPBG00000011331	POP5	96	68.072	ENSOARG00000012764	POP5	97	68.072	Ovis_aries
ENSCPBG00000011331	POP5	88	72.109	ENSPPAG00000043719	POP5	100	68.675	Pan_paniscus
ENSCPBG00000011331	POP5	96	66.463	ENSPPRG00000006474	POP5	96	66.463	Panthera_pardus
ENSCPBG00000011331	POP5	96	66.463	ENSPTIG00000012194	POP5	96	66.463	Panthera_tigris_altaica
ENSCPBG00000011331	POP5	88	72.109	ENSPTRG00000005543	POP5	100	68.675	Pan_troglodytes
ENSCPBG00000011331	POP5	88	72.109	ENSPANG00000014166	POP5	100	68.675	Papio_anubis
ENSCPBG00000011331	POP5	88	61.486	ENSPKIG00000025154	pop5	98	58.896	Paramormyrops_kingsleyae
ENSCPBG00000011331	POP5	68	92.105	ENSPSIG00000013154	POP5	90	92.105	Pelodiscus_sinensis
ENSCPBG00000011331	POP5	97	54.545	ENSPMGG00000000812	-	100	54.545	Periophthalmus_magnuspinnatus
ENSCPBG00000011331	POP5	99	65.680	ENSPEMG00000017493	Pop5	100	65.680	Peromyscus_maniculatus_bairdii
ENSCPBG00000011331	POP5	88	60.811	ENSPFOG00000013000	pop5	94	63.366	Poecilia_formosa
ENSCPBG00000011331	POP5	88	60.544	ENSPLAG00000014070	pop5	99	57.143	Poecilia_latipinna
ENSCPBG00000011331	POP5	88	59.864	ENSPMEG00000024039	pop5	99	56.364	Poecilia_mexicana
ENSCPBG00000011331	POP5	88	59.864	ENSPMEG00000012863	POP5	99	56.364	Poecilia_mexicana
ENSCPBG00000011331	POP5	86	62.500	ENSPREG00000020151	pop5	99	58.084	Poecilia_reticulata
ENSCPBG00000011331	POP5	88	71.429	ENSPPYG00000005036	POP5	84	67.470	Pongo_abelii
ENSCPBG00000011331	POP5	62	67.308	ENSPCAG00000004788	POP5	100	67.308	Procavia_capensis
ENSCPBG00000011331	POP5	87	71.233	ENSPCOG00000017618	POP5	96	68.902	Propithecus_coquereli
ENSCPBG00000011331	POP5	88	70.068	ENSPVAG00000002233	POP5	96	67.683	Pteropus_vampyrus
ENSCPBG00000011331	POP5	90	60.526	ENSPNYG00000002679	pop5	99	59.036	Pundamilia_nyererei
ENSCPBG00000011331	POP5	86	51.034	ENSPNAG00000012662	pop5	92	47.853	Pygocentrus_nattereri
ENSCPBG00000011331	POP5	93	67.925	ENSRNOG00000001199	Pop5	96	67.485	Rattus_norvegicus
ENSCPBG00000011331	POP5	87	70.548	ENSRBIG00000043505	POP5	100	69.620	Rhinopithecus_bieti
ENSCPBG00000011331	POP5	88	70.748	ENSRROG00000045063	POP5	100	69.620	Rhinopithecus_roxellana
ENSCPBG00000011331	POP5	88	72.109	ENSSBOG00000032691	POP5	99	73.134	Saimiri_boliviensis_boliviensis
ENSCPBG00000011331	POP5	88	62.162	ENSSFOG00015005630	pop5	98	58.788	Scleropages_formosus
ENSCPBG00000011331	POP5	91	56.129	ENSSMAG00000018868	pop5	100	53.254	Scophthalmus_maximus
ENSCPBG00000011331	POP5	97	54.545	ENSSDUG00000001282	-	99	54.545	Seriola_dumerili
ENSCPBG00000011331	POP5	97	55.152	ENSSLDG00000003801	-	99	55.152	Seriola_lalandi_dorsalis
ENSCPBG00000011331	POP5	97	55.152	ENSSLDG00000017031	pop5	99	55.152	Seriola_lalandi_dorsalis
ENSCPBG00000011331	POP5	62	68.269	ENSSARG00000005564	POP5	64	68.269	Sorex_araneus
ENSCPBG00000011331	POP5	88	87.838	ENSSPUG00000015531	POP5	99	84.524	Sphenodon_punctatus
ENSCPBG00000011331	POP5	88	61.224	ENSSPAG00000015306	pop5	99	58.788	Stegastes_partitus
ENSCPBG00000011331	POP5	99	68.824	ENSSSCG00000009912	POP5	99	68.824	Sus_scrofa
ENSCPBG00000011331	POP5	97	79.141	ENSTGUG00000009602	POP5	98	79.141	Taeniopygia_guttata
ENSCPBG00000011331	POP5	97	57.669	ENSTRUG00000016214	pop5	97	57.669	Takifugu_rubripes
ENSCPBG00000011331	POP5	98	54.545	ENSTNIG00000011465	pop5	95	54.545	Tetraodon_nigroviridis
ENSCPBG00000011331	POP5	99	63.473	ENSTBEG00000010131	POP5	100	65.680	Tupaia_belangeri
ENSCPBG00000011331	POP5	96	67.683	ENSTTRG00000000153	POP5	96	67.683	Tursiops_truncatus
ENSCPBG00000011331	POP5	92	65.605	ENSUAMG00000015541	POP5	73	65.605	Ursus_americanus
ENSCPBG00000011331	POP5	95	66.871	ENSUMAG00000006137	POP5	96	66.871	Ursus_maritimus
ENSCPBG00000011331	POP5	96	67.683	ENSVPAG00000010365	POP5	96	67.683	Vicugna_pacos
ENSCPBG00000011331	POP5	96	67.683	ENSVVUG00000021154	POP5	96	67.683	Vulpes_vulpes
ENSCPBG00000011331	POP5	67	64.035	ENSXETG00000031793	POP5	100	64.035	Xenopus_tropicalis
ENSCPBG00000011331	POP5	88	62.585	ENSXMAG00000003508	-	87	57.485	Xiphophorus_maculatus