EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000011715 (Gene tree)
Gene ID: 101941262
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Minus strand
Length: 47340 bases
Position: chrKK083183.1:564877-612216
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000015863	MMR_HSR1	PF01926.23	2.4e-05	1	1
ENSCPBP00000015866	MMR_HSR1	PF01926.23	2.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000018779	-	1606	-	ENSCPBP00000015866	225 (aa)	XP_005310885	UPI000388CE32
ENSCPBT00000018775	-	1378	-	ENSCPBP00000015863	225 (aa)	XP_005310885	UPI000388CE32

Gene Model

Click here to download ENSCPBG00000011715's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000011715's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000011715	-	72	33.529	ENSCPBG00000001542	RAB9B	85	33.529
ENSCPBG00000011715	-	51	33.621	ENSCPBG00000011914	RAB19	54	33.621
ENSCPBG00000011715	-	80	34.409	ENSCPBG00000013243	RAB1A	88	34.409
ENSCPBG00000011715	-	70	38.889	ENSCPBG00000027619	-	80	38.889
ENSCPBG00000011715	-	70	34.940	ENSCPBG00000014343	RAB7A	80	34.940
ENSCPBG00000011715	-	66	32.680	ENSCPBG00000014340	RAB41	73	30.719
ENSCPBG00000011715	-	66	30.065	ENSCPBG00000000041	RAB6A	74	30.065
ENSCPBG00000011715	-	64	31.788	ENSCPBG00000011245	RAB42	77	31.788
ENSCPBG00000011715	-	74	31.176	ENSCPBG00000012631	RAB35	85	31.176
ENSCPBG00000011715	-	68	35.256	ENSCPBG00000025819	-	76	35.256
ENSCPBG00000011715	-	73	34.911	ENSCPBG00000012712	RAB5B	79	34.911
ENSCPBG00000011715	-	68	35.443	ENSCPBG00000012691	RAB2B	73	35.443
ENSCPBG00000011715	-	64	30.667	ENSCPBG00000013681	MRAS	77	31.677
ENSCPBG00000011715	-	73	34.911	ENSCPBG00000022559	RAB5A	79	34.911
ENSCPBG00000011715	-	63	38.621	ENSCPBG00000015839	-	70	38.621
ENSCPBG00000011715	-	73	35.714	ENSCPBG00000022446	RAB1B	80	35.714
ENSCPBG00000011715	-	89	30.583	ENSCPBG00000027605	RAB33B	85	30.583
ENSCPBG00000011715	-	67	37.342	ENSCPBG00000023927	RAB22A	79	37.342
ENSCPBG00000011715	-	68	37.580	ENSCPBG00000017056	-	72	37.580
ENSCPBG00000011715	-	89	32.039	ENSCPBG00000014614	RAB11A	89	32.039
ENSCPBG00000011715	-	75	33.333	ENSCPBG00000006855	RAB30	86	33.333
ENSCPBG00000011715	-	76	34.759	ENSCPBG00000012042	RAB33A	74	34.759
ENSCPBG00000011715	-	68	36.709	ENSCPBG00000009941	RAB14	73	36.709
ENSCPBG00000011715	-	76	34.857	ENSCPBG00000028375	RAB12	86	31.674
ENSCPBG00000011715	-	78	30.220	ENSCPBG00000002289	RAB36	55	30.220
ENSCPBG00000011715	-	68	31.646	ENSCPBG00000025817	RAB25	74	31.646
ENSCPBG00000011715	-	73	33.721	ENSCPBG00000016033	RAB9A	79	33.721
ENSCPBG00000011715	-	68	32.911	ENSCPBG00000023254	RAB2A	75	32.911
ENSCPBG00000011715	-	51	33.333	ENSCPBG00000011236	-	54	33.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000011715	-	93	81.043	ENSG00000079974	RABL2B	91	88.889	Homo_sapiens
ENSCPBG00000011715	-	93	81.043	ENSG00000144134	RABL2A	92	87.619	Homo_sapiens
ENSCPBG00000011715	-	95	76.168	ENSAPOG00000023708	rabl2	96	76.168	Acanthochromis_polyacanthus
ENSCPBG00000011715	-	93	80.841	ENSAMEG00000003173	-	95	80.841	Ailuropoda_melanoleuca
ENSCPBG00000011715	-	99	73.423	ENSACIG00000000670	rabl2	99	73.423	Amphilophus_citrinellus
ENSCPBG00000011715	-	95	76.636	ENSAOCG00000008069	rabl2	96	76.636	Amphiprion_ocellaris
ENSCPBG00000011715	-	95	76.168	ENSAPEG00000003164	rabl2	96	76.168	Amphiprion_percula
ENSCPBG00000011715	-	95	76.168	ENSATEG00000001111	rabl2	96	76.168	Anabas_testudineus
ENSCPBG00000011715	-	78	85.795	ENSACAG00000000418	-	100	85.795	Anolis_carolinensis
ENSCPBG00000011715	-	94	79.245	ENSANAG00000021001	-	93	79.245	Aotus_nancymaae
ENSCPBG00000011715	-	99	75.225	ENSACLG00000025632	rabl2	99	75.225	Astatotilapia_calliptera
ENSCPBG00000011715	-	96	81.481	ENSAMXG00000040611	rabl2	96	81.481	Astyanax_mexicanus
ENSCPBG00000011715	-	92	83.495	ENSBTAG00000004876	RABL2B	96	80.180	Bos_taurus
ENSCPBG00000011715	-	98	79.091	ENSCJAG00000018414	-	96	79.091	Callithrix_jacchus
ENSCPBG00000011715	-	94	81.132	ENSCAFG00020006938	-	95	81.132	Canis_lupus_dingo
ENSCPBG00000011715	-	92	82.039	ENSCHIG00000000591	-	92	80.000	Capra_hircus
ENSCPBG00000011715	-	90	81.281	ENSTSYG00000004323	-	89	81.281	Carlito_syrichta
ENSCPBG00000011715	-	91	82.843	ENSCPOG00000026899	-	92	82.843	Cavia_porcellus
ENSCPBG00000011715	-	94	81.132	ENSCCAG00000025944	-	93	81.132	Cebus_capucinus
ENSCPBG00000011715	-	98	78.733	ENSCATG00000034307	-	94	78.733	Cercocebus_atys
ENSCPBG00000011715	-	88	86.364	ENSCLAG00000017218	-	89	86.364	Chinchilla_lanigera
ENSCPBG00000011715	-	93	80.751	ENSCSAG00000004698	-	92	80.751	Chlorocebus_sabaeus
ENSCPBG00000011715	-	80	70.000	ENSCING00000004961	-	84	70.000	Ciona_intestinalis
ENSCPBG00000011715	-	80	70.000	ENSCSAVG00000006042	-	87	70.000	Ciona_savignyi
ENSCPBG00000011715	-	93	81.043	ENSCANG00000030879	-	92	81.043	Colobus_angolensis_palliatus
ENSCPBG00000011715	-	94	79.245	ENSCGRG00001021894	Rabl2	95	79.245	Cricetulus_griseus_chok1gshd
ENSCPBG00000011715	-	89	77.228	ENSCSEG00000005479	rabl2	96	73.953	Cynoglossus_semilaevis
ENSCPBG00000011715	-	95	75.234	ENSCVAG00000011432	rabl2	97	75.234	Cyprinodon_variegatus
ENSCPBG00000011715	-	97	78.899	ENSDARG00000063321	rabl2	98	78.899	Danio_rerio
ENSCPBG00000011715	-	93	83.810	ENSDNOG00000035151	-	95	83.810	Dasypus_novemcinctus
ENSCPBG00000011715	-	94	81.604	ENSDORG00000000003	Rabl2	95	81.604	Dipodomys_ordii
ENSCPBG00000011715	-	95	79.812	ENSEASG00005008239	-	96	79.812	Equus_asinus_asinus
ENSCPBG00000011715	-	95	79.812	ENSECAG00000026942	-	96	79.812	Equus_caballus
ENSCPBG00000011715	-	88	85.859	ENSFCAG00000033642	-	89	85.859	Felis_catus
ENSCPBG00000011715	-	95	79.907	ENSFDAG00000002113	-	96	79.907	Fukomys_damarensis
ENSCPBG00000011715	-	96	76.256	ENSFHEG00000015015	rabl2	83	76.256	Fundulus_heteroclitus
ENSCPBG00000011715	-	89	79.500	ENSGMOG00000018928	rabl2	100	79.500	Gadus_morhua
ENSCPBG00000011715	-	91	87.864	ENSGALG00000032458	RABL2B	92	87.864	Gallus_gallus
ENSCPBG00000011715	-	85	80.729	ENSGAFG00000005188	rabl2	95	77.251	Gambusia_affinis
ENSCPBG00000011715	-	95	73.364	ENSGACG00000012474	rabl2	97	73.364	Gasterosteus_aculeatus
ENSCPBG00000011715	-	99	75.225	ENSHBUG00000010964	rabl2	99	75.225	Haplochromis_burtoni
ENSCPBG00000011715	-	94	82.547	ENSHGLG00000005750	-	95	82.547	Heterocephalus_glaber_female
ENSCPBG00000011715	-	94	82.547	ENSHGLG00100016281	-	95	82.547	Heterocephalus_glaber_male
ENSCPBG00000011715	-	97	79.545	ENSSTOG00000002723	-	99	79.545	Ictidomys_tridecemlineatus
ENSCPBG00000011715	-	97	77.273	ENSJJAG00000010792	Rabl2	99	77.273	Jaculus_jaculus
ENSCPBG00000011715	-	95	77.103	ENSKMAG00000012723	rabl2	96	77.103	Kryptolebias_marmoratus
ENSCPBG00000011715	-	92	77.404	ENSLBEG00000003644	rabl2	93	77.404	Labrus_bergylta
ENSCPBG00000011715	-	98	79.372	ENSLACG00000003722	rabl2	99	79.372	Latimeria_chalumnae
ENSCPBG00000011715	-	92	80.952	ENSLOCG00000016767	rabl2	93	80.952	Lepisosteus_oculatus
ENSCPBG00000011715	-	93	81.991	ENSMFAG00000044775	-	92	81.991	Macaca_fascicularis
ENSCPBG00000011715	-	93	81.991	ENSMMUG00000022914	RABL2B	92	81.991	Macaca_mulatta
ENSCPBG00000011715	-	93	81.517	ENSMNEG00000028460	-	92	81.517	Macaca_nemestrina
ENSCPBG00000011715	-	98	78.281	ENSMLEG00000032621	-	94	78.281	Mandrillus_leucophaeus
ENSCPBG00000011715	-	95	76.168	ENSMAMG00000008168	rabl2	96	76.168	Mastacembelus_armatus
ENSCPBG00000011715	-	99	73.543	ENSMZEG00005019758	rabl2	99	73.543	Maylandia_zebra
ENSCPBG00000011715	-	96	77.880	ENSMAUG00000010955	Rabl2	97	77.880	Mesocricetus_auratus
ENSCPBG00000011715	-	93	82.938	ENSMICG00000031301	-	92	82.938	Microcebus_murinus
ENSCPBG00000011715	-	94	78.774	ENSMOCG00000002775	Rabl2	95	78.774	Microtus_ochrogaster
ENSCPBG00000011715	-	87	89.231	ENSMODG00000010838	-	89	89.231	Monodelphis_domestica
ENSCPBG00000011715	-	96	76.279	ENSMALG00000005944	rabl2	96	76.279	Monopterus_albus
ENSCPBG00000011715	-	94	79.245	MGP_CAROLIEiJ_G0020176	Rabl2	94	79.245	Mus_caroli
ENSCPBG00000011715	-	94	78.774	ENSMUSG00000022621	Rabl2	95	78.774	Mus_musculus
ENSCPBG00000011715	-	94	79.245	MGP_PahariEiJ_G0020181	Rabl2	95	79.245	Mus_pahari
ENSCPBG00000011715	-	94	78.774	MGP_SPRETEiJ_G0021073	Rabl2	95	78.774	Mus_spretus
ENSCPBG00000011715	-	94	80.660	ENSMPUG00000001806	-	95	80.660	Mustela_putorius_furo
ENSCPBG00000011715	-	93	77.512	ENSNGAG00000012843	Rabl2	90	77.512	Nannospalax_galili
ENSCPBG00000011715	-	99	75.225	ENSNBRG00000000489	rabl2	99	75.225	Neolamprologus_brichardi
ENSCPBG00000011715	-	93	80.569	ENSNLEG00000030435	-	92	80.569	Nomascus_leucogenys
ENSCPBG00000011715	-	92	83.173	ENSODEG00000015650	-	93	83.173	Octodon_degus
ENSCPBG00000011715	-	100	75.330	ENSONIG00000014885	rabl2	99	75.676	Oreochromis_niloticus
ENSCPBG00000011715	-	92	75.243	ENSORLG00000009874	rabl2	91	75.243	Oryzias_latipes
ENSCPBG00000011715	-	92	75.243	ENSORLG00020001721	rabl2	91	75.243	Oryzias_latipes_hni
ENSCPBG00000011715	-	92	75.243	ENSORLG00015014268	rabl2	91	75.243	Oryzias_latipes_hsok
ENSCPBG00000011715	-	90	76.733	ENSOMEG00000008576	rabl2	93	76.733	Oryzias_melastigma
ENSCPBG00000011715	-	88	87.374	ENSOGAG00000009123	-	86	87.374	Otolemur_garnettii
ENSCPBG00000011715	-	88	84.422	ENSPPRG00000014642	-	87	84.422	Panthera_pardus
ENSCPBG00000011715	-	88	85.859	ENSPTIG00000018747	-	89	85.859	Panthera_tigris_altaica
ENSCPBG00000011715	-	93	76.818	ENSPTRG00000014555	-	92	76.818	Pan_troglodytes
ENSCPBG00000011715	-	94	77.477	ENSPANG00000036121	-	93	77.477	Papio_anubis
ENSCPBG00000011715	-	95	79.343	ENSPKIG00000025372	rabl2	95	79.343	Paramormyrops_kingsleyae
ENSCPBG00000011715	-	100	94.222	ENSPSIG00000014041	-	100	94.222	Pelodiscus_sinensis
ENSCPBG00000011715	-	89	75.000	ENSPMGG00000012946	rabl2	96	75.000	Periophthalmus_magnuspinnatus
ENSCPBG00000011715	-	94	79.245	ENSPEMG00000024045	Rabl2	95	79.245	Peromyscus_maniculatus_bairdii
ENSCPBG00000011715	-	94	82.075	ENSPCIG00000012436	-	91	79.821	Phascolarctos_cinereus
ENSCPBG00000011715	-	90	78.431	ENSPFOG00000017960	rabl2	92	78.431	Poecilia_formosa
ENSCPBG00000011715	-	90	79.208	ENSPLAG00000015685	rabl2	92	79.208	Poecilia_latipinna
ENSCPBG00000011715	-	90	79.208	ENSPMEG00000004703	rabl2	92	79.208	Poecilia_mexicana
ENSCPBG00000011715	-	86	80.311	ENSPREG00000014761	rabl2	95	80.311	Poecilia_reticulata
ENSCPBG00000011715	-	93	81.517	ENSPPYG00000012000	-	92	81.517	Pongo_abelii
ENSCPBG00000011715	-	99	81.614	ENSPCOG00000024865	-	96	81.614	Propithecus_coquereli
ENSCPBG00000011715	-	94	75.446	ENSPVAG00000004539	-	94	75.446	Pteropus_vampyrus
ENSCPBG00000011715	-	99	75.225	ENSPNYG00000004845	rabl2	99	75.225	Pundamilia_nyererei
ENSCPBG00000011715	-	91	82.843	ENSPNAG00000024254	rabl2	97	80.909	Pygocentrus_nattereri
ENSCPBG00000011715	-	94	79.717	ENSRNOG00000013947	Rabl2	85	79.717	Rattus_norvegicus
ENSCPBG00000011715	-	93	81.043	ENSRBIG00000033607	-	92	81.043	Rhinopithecus_bieti
ENSCPBG00000011715	-	93	81.991	ENSRROG00000031130	-	92	81.991	Rhinopithecus_roxellana
ENSCPBG00000011715	-	94	81.132	ENSSBOG00000033266	-	93	81.132	Saimiri_boliviensis_boliviensis
ENSCPBG00000011715	-	90	82.759	ENSSFOG00015020738	rabl2	95	81.043	Scleropages_formosus
ENSCPBG00000011715	-	96	76.389	ENSSMAG00000004606	rabl2	96	76.389	Scophthalmus_maximus
ENSCPBG00000011715	-	95	76.168	ENSSDUG00000014765	rabl2	96	76.168	Seriola_dumerili
ENSCPBG00000011715	-	77	83.237	ENSSSCG00000025041	-	100	83.237	Sus_scrofa
ENSCPBG00000011715	-	91	82.039	ENSTGUG00000016028	-	99	82.039	Taeniopygia_guttata
ENSCPBG00000011715	-	95	74.299	ENSTRUG00000012454	rabl2	96	74.299	Takifugu_rubripes
ENSCPBG00000011715	-	95	74.299	ENSTNIG00000017951	rabl2	96	74.299	Tetraodon_nigroviridis
ENSCPBG00000011715	-	84	87.766	ENSUAMG00000015761	-	84	87.766	Ursus_americanus
ENSCPBG00000011715	-	88	86.364	ENSUMAG00000017116	-	89	86.364	Ursus_maritimus
ENSCPBG00000011715	-	94	81.132	ENSVVUG00000025761	-	95	81.132	Vulpes_vulpes
ENSCPBG00000011715	-	97	79.018	ENSXETG00000015712	rabl2b	99	79.018	Xenopus_tropicalis
ENSCPBG00000011715	-	87	80.513	ENSXMAG00000004569	rabl2	95	77.251	Xiphophorus_maculatus