EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCPBG00000011958 (Gene tree)
Gene ID: 101933047
Gene Symbol: PARP1
Alias: ADPRT|PARP|PPOL
Full Name: poly(ADP-ribose) polymerase 1
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Plus strand
Length: 54677 bases
Position: chr3:27194951-27249627
Accession: 270
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000016211	PARP	PF00644.20	8e-74	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000019186	PARP1-201	3834	-	ENSCPBP00000016211	1011 (aa)	XP_005289622	UPI000388A458

Gene Model

Click here to download ENSCPBG00000011958's gene model file

Pathways

Pathway ID	Pathway Name	Source
cpic03410	Base excision repair	KEGG
cpic04210	Apoptosis	KEGG
cpic04217	Necroptosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000011958's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000011958	PARP1	100	80.433	ENSG00000143799	PARP1	100	80.452	Homo_sapiens
ENSCPBG00000011958	PARP1	99	73.544	ENSAPOG00000006414	parp1	99	73.544	Acanthochromis_polyacanthus
ENSCPBG00000011958	PARP1	99	78.049	ENSAMEG00000014451	PARP1	100	78.659	Ailuropoda_melanoleuca
ENSCPBG00000011958	PARP1	99	73.195	ENSACIG00000005651	parp1	99	72.970	Amphilophus_citrinellus
ENSCPBG00000011958	PARP1	99	73.741	ENSAOCG00000021005	parp1	99	73.741	Amphiprion_ocellaris
ENSCPBG00000011958	PARP1	99	73.866	ENSAPEG00000004784	parp1	99	73.866	Amphiprion_percula
ENSCPBG00000011958	PARP1	99	73.399	ENSATEG00000010457	parp1	99	73.399	Anabas_testudineus
ENSCPBG00000011958	PARP1	87	88.826	ENSAPLG00000014039	PARP1	100	88.826	Anas_platyrhynchos
ENSCPBG00000011958	PARP1	100	85.079	ENSACAG00000006189	PARP1	100	85.178	Anolis_carolinensis
ENSCPBG00000011958	PARP1	100	79.765	ENSANAG00000032699	PARP1	100	80.217	Aotus_nancymaae
ENSCPBG00000011958	PARP1	99	74.254	ENSACLG00000015489	parp1	99	74.254	Astatotilapia_calliptera
ENSCPBG00000011958	PARP1	99	72.299	ENSAMXG00000006465	parp1	99	72.004	Astyanax_mexicanus
ENSCPBG00000011958	PARP1	100	77.974	ENSBTAG00000000837	PARP1	100	77.974	Bos_taurus
ENSCPBG00000011958	PARP1	83	44.841	WBGene00004049	parp-1	100	46.388	Caenorhabditis_elegans
ENSCPBG00000011958	PARP1	100	79.570	ENSCJAG00000012831	PARP1	100	80.039	Callithrix_jacchus
ENSCPBG00000011958	PARP1	99	78.462	ENSCAFG00000016089	PARP1	100	79.179	Canis_familiaris
ENSCPBG00000011958	PARP1	100	79.113	ENSCAFG00020001660	PARP1	100	79.548	Canis_lupus_dingo
ENSCPBG00000011958	PARP1	100	78.424	ENSCHIG00000018072	PARP1	100	78.487	Capra_hircus
ENSCPBG00000011958	PARP1	98	80.174	ENSTSYG00000003699	PARP1	99	80.174	Carlito_syrichta
ENSCPBG00000011958	PARP1	99	65.746	ENSCAPG00000011113	-	99	65.642	Cavia_aperea
ENSCPBG00000011958	PARP1	100	78.522	ENSCPOG00000015643	-	100	78.522	Cavia_porcellus
ENSCPBG00000011958	PARP1	100	80.236	ENSCCAG00000033484	PARP1	100	80.255	Cebus_capucinus
ENSCPBG00000011958	PARP1	100	79.941	ENSCATG00000038981	PARP1	100	79.941	Cercocebus_atys
ENSCPBG00000011958	PARP1	100	78.761	ENSCLAG00000006637	PARP1	100	78.782	Chinchilla_lanigera
ENSCPBG00000011958	PARP1	65	89.062	ENSCHOG00000003539	PARP1	66	89.062	Choloepus_hoffmanni
ENSCPBG00000011958	PARP1	99	79.632	ENSCANG00000041340	PARP1	100	79.632	Colobus_angolensis_palliatus
ENSCPBG00000011958	PARP1	100	78.248	ENSCGRG00001020559	Parp1	100	78.543	Cricetulus_griseus_chok1gshd
ENSCPBG00000011958	PARP1	99	78.176	ENSCGRG00000004864	Parp1	100	78.484	Cricetulus_griseus_crigri
ENSCPBG00000011958	PARP1	94	78.119	ENSCSEG00000020665	parp1	99	78.119	Cynoglossus_semilaevis
ENSCPBG00000011958	PARP1	99	72.403	ENSCVAG00000021372	parp1	99	72.403	Cyprinodon_variegatus
ENSCPBG00000011958	PARP1	99	72.559	ENSDARG00000019529	parp1	99	72.682	Danio_rerio
ENSCPBG00000011958	PARP1	99	78.520	ENSDNOG00000012059	PARP1	100	78.520	Dasypus_novemcinctus
ENSCPBG00000011958	PARP1	99	77.561	ENSDORG00000005234	Parp1	100	77.766	Dipodomys_ordii
ENSCPBG00000011958	PARP1	99	42.141	FBgn0010247	Parp	99	41.790	Drosophila_melanogaster
ENSCPBG00000011958	PARP1	87	89.062	ENSETEG00000013254	PARP1	88	89.062	Echinops_telfairi
ENSCPBG00000011958	PARP1	99	60.585	ENSEBUG00000005820	parp1	100	60.585	Eptatretus_burgeri
ENSCPBG00000011958	PARP1	98	78.779	ENSEASG00005013275	PARP1	99	79.820	Equus_asinus_asinus
ENSCPBG00000011958	PARP1	100	78.859	ENSECAG00000019207	PARP1	100	80.157	Equus_caballus
ENSCPBG00000011958	PARP1	100	75.859	ENSEEUG00000012253	PARP1	100	75.957	Erinaceus_europaeus
ENSCPBG00000011958	PARP1	99	73.291	ENSELUG00000017336	parp1	99	72.664	Esox_lucius
ENSCPBG00000011958	PARP1	99	78.942	ENSFCAG00000005777	PARP1	100	79.349	Felis_catus
ENSCPBG00000011958	PARP1	99	88.671	ENSFALG00000011578	PARP1	100	88.671	Ficedula_albicollis
ENSCPBG00000011958	PARP1	99	77.584	ENSFDAG00000017662	PARP1	100	77.584	Fukomys_damarensis
ENSCPBG00000011958	PARP1	99	73.176	ENSFHEG00000001117	parp1	99	73.176	Fundulus_heteroclitus
ENSCPBG00000011958	PARP1	99	72.512	ENSGMOG00000014929	parp1	99	72.512	Gadus_morhua
ENSCPBG00000011958	PARP1	100	89.614	ENSGALG00000009228	PARP1	100	89.614	Gallus_gallus
ENSCPBG00000011958	PARP1	99	73.425	ENSGAFG00000010450	parp1	100	73.288	Gambusia_affinis
ENSCPBG00000011958	PARP1	99	71.976	ENSGACG00000011280	parp1	99	71.976	Gasterosteus_aculeatus
ENSCPBG00000011958	PARP1	100	98.220	ENSGAGG00000010066	PARP1	100	98.220	Gopherus_agassizii
ENSCPBG00000011958	PARP1	100	80.236	ENSGGOG00000006308	PARP1	100	80.255	Gorilla_gorilla
ENSCPBG00000011958	PARP1	99	74.260	ENSHBUG00000010490	parp1	99	74.260	Haplochromis_burtoni
ENSCPBG00000011958	PARP1	96	77.869	ENSHGLG00000003992	PARP1	93	77.869	Heterocephalus_glaber_female
ENSCPBG00000011958	PARP1	96	77.869	ENSHGLG00100016965	PARP1	93	77.869	Heterocephalus_glaber_male
ENSCPBG00000011958	PARP1	99	71.148	ENSHCOG00000011619	parp1	99	71.246	Hippocampus_comes
ENSCPBG00000011958	PARP1	99	71.233	ENSIPUG00000020250	parp1	99	71.750	Ictalurus_punctatus
ENSCPBG00000011958	PARP1	100	79.941	ENSSTOG00000016000	PARP1	100	79.941	Ictidomys_tridecemlineatus
ENSCPBG00000011958	PARP1	100	77.974	ENSJJAG00000023497	Parp1	100	78.466	Jaculus_jaculus
ENSCPBG00000011958	PARP1	99	73.445	ENSKMAG00000011627	parp1	99	73.445	Kryptolebias_marmoratus
ENSCPBG00000011958	PARP1	99	72.925	ENSLBEG00000013376	parp1	99	72.925	Labrus_bergylta
ENSCPBG00000011958	PARP1	99	59.980	ENSLACG00000002735	PARP1	100	60.353	Latimeria_chalumnae
ENSCPBG00000011958	PARP1	99	76.342	ENSLOCG00000015798	parp1	99	76.342	Lepisosteus_oculatus
ENSCPBG00000011958	PARP1	99	78.301	ENSLAFG00000007830	PARP1	100	79.017	Loxodonta_africana
ENSCPBG00000011958	PARP1	100	79.961	ENSMFAG00000002526	PARP1	100	79.961	Macaca_fascicularis
ENSCPBG00000011958	PARP1	100	80.059	ENSMMUG00000021820	PARP1	100	80.059	Macaca_mulatta
ENSCPBG00000011958	PARP1	100	79.941	ENSMNEG00000034074	PARP1	100	79.941	Macaca_nemestrina
ENSCPBG00000011958	PARP1	100	78.039	ENSMLEG00000012344	PARP1	100	78.039	Mandrillus_leucophaeus
ENSCPBG00000011958	PARP1	99	74.382	ENSMAMG00000020652	parp1	99	74.382	Mastacembelus_armatus
ENSCPBG00000011958	PARP1	99	74.359	ENSMZEG00005016907	parp1	99	74.359	Maylandia_zebra
ENSCPBG00000011958	PARP1	99	88.568	ENSMGAG00000007760	PARP1	100	89.186	Meleagris_gallopavo
ENSCPBG00000011958	PARP1	100	78.248	ENSMAUG00000008306	Parp1	100	78.346	Mesocricetus_auratus
ENSCPBG00000011958	PARP1	100	76.598	ENSMICG00000017076	PARP1	100	76.598	Microcebus_murinus
ENSCPBG00000011958	PARP1	100	78.543	ENSMOCG00000014315	Parp1	100	78.642	Microtus_ochrogaster
ENSCPBG00000011958	PARP1	99	73.241	ENSMMOG00000015966	parp1	99	73.195	Mola_mola
ENSCPBG00000011958	PARP1	100	83.037	ENSMODG00000006076	PARP1	100	83.235	Monodelphis_domestica
ENSCPBG00000011958	PARP1	99	71.330	ENSMALG00000004057	parp1	99	71.330	Monopterus_albus
ENSCPBG00000011958	PARP1	100	78.269	MGP_CAROLIEiJ_G0014978	Parp1	100	86.735	Mus_caroli
ENSCPBG00000011958	PARP1	100	78.466	ENSMUSG00000026496	Parp1	99	86.735	Mus_musculus
ENSCPBG00000011958	PARP1	100	78.466	MGP_SPRETEiJ_G0015777	Parp1	100	86.735	Mus_spretus
ENSCPBG00000011958	PARP1	100	79.035	ENSMPUG00000004585	PARP1	100	79.626	Mustela_putorius_furo
ENSCPBG00000011958	PARP1	90	65.683	ENSMLUG00000012285	PARP1	100	66.120	Myotis_lucifugus
ENSCPBG00000011958	PARP1	100	79.035	ENSNGAG00000003885	Parp1	100	79.035	Nannospalax_galili
ENSCPBG00000011958	PARP1	99	74.354	ENSNBRG00000017434	parp1	99	74.354	Neolamprologus_brichardi
ENSCPBG00000011958	PARP1	97	79.952	ENSNLEG00000013905	PARP1	100	79.952	Nomascus_leucogenys
ENSCPBG00000011958	PARP1	67	88.955	ENSMEUG00000007720	PARP1	87	88.955	Notamacropus_eugenii
ENSCPBG00000011958	PARP1	100	79.862	ENSOPRG00000011722	PARP1	100	80.255	Ochotona_princeps
ENSCPBG00000011958	PARP1	100	77.286	ENSODEG00000007424	PARP1	100	77.778	Octodon_degus
ENSCPBG00000011958	PARP1	99	74.038	ENSONIG00000013486	parp1	99	74.038	Oreochromis_niloticus
ENSCPBG00000011958	PARP1	99	87.564	ENSOANG00000001488	PARP1	100	87.667	Ornithorhynchus_anatinus
ENSCPBG00000011958	PARP1	100	80.039	ENSOCUG00000017820	PARP1	100	80.433	Oryctolagus_cuniculus
ENSCPBG00000011958	PARP1	99	73.149	ENSORLG00000013691	parp1	99	73.149	Oryzias_latipes
ENSCPBG00000011958	PARP1	99	72.414	ENSORLG00020001074	parp1	99	72.414	Oryzias_latipes_hni
ENSCPBG00000011958	PARP1	99	72.952	ENSORLG00015007090	parp1	99	72.952	Oryzias_latipes_hsok
ENSCPBG00000011958	PARP1	100	79.666	ENSOGAG00000016206	PARP1	100	79.666	Otolemur_garnettii
ENSCPBG00000011958	PARP1	100	78.269	ENSOARG00000000811	PARP1	100	78.782	Ovis_aries
ENSCPBG00000011958	PARP1	100	80.236	ENSPPAG00000040862	PARP1	100	80.255	Pan_paniscus
ENSCPBG00000011958	PARP1	99	78.484	ENSPPRG00000003528	PARP1	100	78.996	Panthera_pardus
ENSCPBG00000011958	PARP1	97	67.227	ENSPTIG00000009102	PARP1	98	67.122	Panthera_tigris_altaica
ENSCPBG00000011958	PARP1	100	80.236	ENSPTRG00000002049	PARP1	100	80.255	Pan_troglodytes
ENSCPBG00000011958	PARP1	100	80.059	ENSPANG00000011198	PARP1	100	80.059	Papio_anubis
ENSCPBG00000011958	PARP1	99	72.628	ENSPKIG00000006039	parp1	100	72.410	Paramormyrops_kingsleyae
ENSCPBG00000011958	PARP1	99	94.564	ENSPSIG00000016374	PARP1	100	94.564	Pelodiscus_sinensis
ENSCPBG00000011958	PARP1	99	68.799	ENSPMGG00000008936	parp1	99	68.799	Periophthalmus_magnuspinnatus
ENSCPBG00000011958	PARP1	100	78.839	ENSPEMG00000020230	Parp1	100	78.839	Peromyscus_maniculatus_bairdii
ENSCPBG00000011958	PARP1	100	83.235	ENSPCIG00000006436	PARP1	100	83.235	Phascolarctos_cinereus
ENSCPBG00000011958	PARP1	99	73.130	ENSPFOG00000002342	parp1	99	73.130	Poecilia_formosa
ENSCPBG00000011958	PARP1	99	74.114	ENSPLAG00000000909	parp1	99	74.114	Poecilia_latipinna
ENSCPBG00000011958	PARP1	99	73.720	ENSPMEG00000013979	parp1	99	73.720	Poecilia_mexicana
ENSCPBG00000011958	PARP1	99	73.228	ENSPREG00000001114	parp1	99	73.228	Poecilia_reticulata
ENSCPBG00000011958	PARP1	99	80.000	ENSPPYG00000000164	PARP1	100	80.000	Pongo_abelii
ENSCPBG00000011958	PARP1	59	87.654	ENSPCAG00000005558	-	59	87.654	Procavia_capensis
ENSCPBG00000011958	PARP1	100	79.548	ENSPCOG00000016918	PARP1	100	80.138	Propithecus_coquereli
ENSCPBG00000011958	PARP1	91	86.792	ENSPVAG00000005543	PARP1	86	86.792	Pteropus_vampyrus
ENSCPBG00000011958	PARP1	99	74.254	ENSPNYG00000009702	parp1	99	74.254	Pundamilia_nyererei
ENSCPBG00000011958	PARP1	99	72.941	ENSPNAG00000002787	parp1	99	73.156	Pygocentrus_nattereri
ENSCPBG00000011958	PARP1	100	77.974	ENSRNOG00000003084	Parp1	100	78.859	Rattus_norvegicus
ENSCPBG00000011958	PARP1	100	79.744	ENSRBIG00000044893	PARP1	100	79.744	Rhinopithecus_bieti
ENSCPBG00000011958	PARP1	100	58.055	ENSRROG00000040615	-	100	62.774	Rhinopithecus_roxellana
ENSCPBG00000011958	PARP1	100	79.744	ENSRROG00000029280	PARP1	100	79.744	Rhinopithecus_roxellana
ENSCPBG00000011958	PARP1	100	79.668	ENSSBOG00000010144	PARP1	100	80.452	Saimiri_boliviensis_boliviensis
ENSCPBG00000011958	PARP1	99	83.025	ENSSHAG00000001991	PARP1	100	83.025	Sarcophilus_harrisii
ENSCPBG00000011958	PARP1	99	72.986	ENSSFOG00015020017	parp1	99	73.281	Scleropages_formosus
ENSCPBG00000011958	PARP1	99	73.176	ENSSMAG00000013799	parp1	99	73.176	Scophthalmus_maximus
ENSCPBG00000011958	PARP1	99	73.202	ENSSDUG00000016626	parp1	99	73.202	Seriola_dumerili
ENSCPBG00000011958	PARP1	99	73.300	ENSSLDG00000006384	parp1	99	73.300	Seriola_lalandi_dorsalis
ENSCPBG00000011958	PARP1	54	87.269	ENSSARG00000009436	-	59	87.269	Sorex_araneus
ENSCPBG00000011958	PARP1	100	86.957	ENSSPUG00000007790	PARP1	100	87.154	Sphenodon_punctatus
ENSCPBG00000011958	PARP1	99	72.294	ENSSPAG00000019074	parp1	99	73.707	Stegastes_partitus
ENSCPBG00000011958	PARP1	100	78.958	ENSSSCG00000023660	PARP1	100	78.958	Sus_scrofa
ENSCPBG00000011958	PARP1	96	87.848	ENSTGUG00000004260	-	100	87.848	Taeniopygia_guttata
ENSCPBG00000011958	PARP1	99	72.925	ENSTRUG00000014490	parp1	99	72.925	Takifugu_rubripes
ENSCPBG00000011958	PARP1	100	72.098	ENSTNIG00000016384	parp1	100	72.098	Tetraodon_nigroviridis
ENSCPBG00000011958	PARP1	85	83.091	ENSTBEG00000002364	PARP1	92	83.091	Tupaia_belangeri
ENSCPBG00000011958	PARP1	100	74.409	ENSTTRG00000000188	PARP1	100	74.926	Tursiops_truncatus
ENSCPBG00000011958	PARP1	99	78.016	ENSUAMG00000014388	PARP1	100	78.630	Ursus_americanus
ENSCPBG00000011958	PARP1	96	70.889	ENSUMAG00000014555	PARP1	99	71.502	Ursus_maritimus
ENSCPBG00000011958	PARP1	84	88.722	ENSVPAG00000011411	PARP1	84	88.722	Vicugna_pacos
ENSCPBG00000011958	PARP1	96	78.359	ENSVVUG00000001655	PARP1	100	79.179	Vulpes_vulpes
ENSCPBG00000011958	PARP1	98	76.358	ENSXETG00000022610	parp1	99	76.358	Xenopus_tropicalis
ENSCPBG00000011958	PARP1	99	73.228	ENSXMAG00000003632	parp1	99	73.228	Xiphophorus_maculatus