EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000012105 (Gene tree)
Gene ID: -
Gene Symbol: DDX28
Alias: FLJ11282|MDDX28
Full Name: DEAD-box helicase 28
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Plus strand
Length: 4766 bases
Position: chr15:4503595-4508360
Accession: 17330
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000016425	DEAD	PF00270.29	1.3e-34	1	1
ENSCPBP00000016420	DEAD	PF00270.29	8.6e-34	1	1
ENSCPBP00000016421	DEAD	PF00270.29	8.7e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000019421	DDX28-202	1683	-	ENSCPBP00000016421	560 (aa)	-	-
ENSCPBT00000019420	DDX28-201	1677	-	ENSCPBP00000016420	558 (aa)	-	-
ENSCPBT00000019425	DDX28-203	1458	-	ENSCPBP00000016425	485 (aa)	-	-

Gene Model

Click here to download ENSCPBG00000012105's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000012105's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000012105	DDX28	77	31.300	ENSCPBG00000012500	DDX49	76	31.362
ENSCPBG00000012105	DDX28	81	33.838	ENSCPBG00000020967	-	81	33.838
ENSCPBG00000012105	DDX28	73	32.402	ENSCPBG00000021215	DDX31	63	32.402
ENSCPBG00000012105	DDX28	74	31.593	ENSCPBG00000023015	-	53	32.203
ENSCPBG00000012105	DDX28	78	30.529	ENSCPBG00000024556	DDX56	72	30.529
ENSCPBG00000012105	DDX28	72	31.180	ENSCPBG00000009227	DDX5	57	31.180
ENSCPBG00000012105	DDX28	75	30.027	ENSCPBG00000022192	DDX41	63	30.027
ENSCPBG00000012105	DDX28	74	43.333	ENSCPBG00000013330	DDX1	68	43.333
ENSCPBG00000012105	DDX28	61	30.976	ENSCPBG00000017801	EIF4A3	75	30.976

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000012105	DDX28	86	59.770	ENSG00000182810	DDX28	87	59.746	Homo_sapiens
ENSCPBG00000012105	DDX28	81	54.074	ENSAPOG00000000991	ddx28	81	51.620	Acanthochromis_polyacanthus
ENSCPBG00000012105	DDX28	87	58.215	ENSAMEG00000019426	DDX28	90	58.215	Ailuropoda_melanoleuca
ENSCPBG00000012105	DDX28	81	53.808	ENSACIG00000021615	ddx28	82	50.855	Amphilophus_citrinellus
ENSCPBG00000012105	DDX28	81	54.074	ENSAOCG00000004610	ddx28	81	51.836	Amphiprion_ocellaris
ENSCPBG00000012105	DDX28	81	53.827	ENSAPEG00000002143	ddx28	81	51.620	Amphiprion_percula
ENSCPBG00000012105	DDX28	85	50.413	ENSATEG00000018691	ddx28	85	50.413	Anabas_testudineus
ENSCPBG00000012105	DDX28	85	63.869	ENSACAG00000009755	DDX28	88	63.410	Anolis_carolinensis
ENSCPBG00000012105	DDX28	81	51.471	ENSACLG00000012984	ddx28	81	49.467	Astatotilapia_calliptera
ENSCPBG00000012105	DDX28	86	51.494	ENSAMXG00000005878	ddx28	84	50.104	Astyanax_mexicanus
ENSCPBG00000012105	DDX28	85	60.557	ENSBTAG00000004290	DDX28	86	60.722	Bos_taurus
ENSCPBG00000012105	DDX28	84	61.085	ENSCAFG00000020327	DDX28	88	60.981	Canis_familiaris
ENSCPBG00000012105	DDX28	84	61.085	ENSCAFG00020019785	DDX28	88	60.981	Canis_lupus_dingo
ENSCPBG00000012105	DDX28	85	60.325	ENSCHIG00000009658	DDX28	86	60.297	Capra_hircus
ENSCPBG00000012105	DDX28	87	56.939	ENSCPOG00000013746	DDX28	91	56.939	Cavia_porcellus
ENSCPBG00000012105	DDX28	85	60.185	ENSCSAG00000018472	DDX28	86	59.322	Chlorocebus_sabaeus
ENSCPBG00000012105	DDX28	75	37.795	ENSCSAVG00000006341	-	98	37.795	Ciona_savignyi
ENSCPBG00000012105	DDX28	82	60.606	ENSCGRG00001024412	Ddx28	88	60.606	Cricetulus_griseus_chok1gshd
ENSCPBG00000012105	DDX28	85	48.760	ENSCSEG00000011651	ddx28	85	48.760	Cynoglossus_semilaevis
ENSCPBG00000012105	DDX28	81	52.605	ENSCVAG00000004044	ddx28	82	50.980	Cyprinodon_variegatus
ENSCPBG00000012105	DDX28	86	51.034	ENSDARG00000060411	ddx28	83	50.426	Danio_rerio
ENSCPBG00000012105	DDX28	72	64.110	ENSDNOG00000033593	DDX28	97	65.278	Dasypus_novemcinctus
ENSCPBG00000012105	DDX28	85	57.077	ENSDORG00000028868	Ddx28	87	57.325	Dipodomys_ordii
ENSCPBG00000012105	DDX28	83	35.084	FBgn0086130	Dbp21E2	94	33.654	Drosophila_melanogaster
ENSCPBG00000012105	DDX28	85	61.485	ENSETEG00000001062	-	87	62.076	Echinops_telfairi
ENSCPBG00000012105	DDX28	59	48.515	ENSEBUG00000004791	ddx28	62	48.515	Eptatretus_burgeri
ENSCPBG00000012105	DDX28	85	60.093	ENSEASG00005020387	DDX28	87	59.873	Equus_asinus_asinus
ENSCPBG00000012105	DDX28	85	60.880	ENSECAG00000006451	DDX28	87	60.593	Equus_caballus
ENSCPBG00000012105	DDX28	65	53.908	ENSEEUG00000005017	DDX28	86	53.908	Erinaceus_europaeus
ENSCPBG00000012105	DDX28	86	52.681	ENSELUG00000005302	ddx28	88	51.828	Esox_lucius
ENSCPBG00000012105	DDX28	85	59.028	ENSFCAG00000012858	DDX28	87	59.110	Felis_catus
ENSCPBG00000012105	DDX28	85	51.522	ENSFHEG00000012573	ddx28	82	51.852	Fundulus_heteroclitus
ENSCPBG00000012105	DDX28	86	50.575	ENSGMOG00000017045	ddx28	86	50.327	Gadus_morhua
ENSCPBG00000012105	DDX28	85	61.785	ENSGALG00000048700	DDX28	92	58.101	Gallus_gallus
ENSCPBG00000012105	DDX28	81	52.605	ENSGAFG00000009249	ddx28	81	50.652	Gambusia_affinis
ENSCPBG00000012105	DDX28	87	51.963	ENSGACG00000016367	ddx28	85	51.860	Gasterosteus_aculeatus
ENSCPBG00000012105	DDX28	78	89.954	ENSGAGG00000004565	DDX28	95	89.954	Gopherus_agassizii
ENSCPBG00000012105	DDX28	86	60.000	ENSGGOG00000001220	DDX28	87	59.958	Gorilla_gorilla
ENSCPBG00000012105	DDX28	81	53.676	ENSHBUG00000001016	ddx28	82	51.173	Haplochromis_burtoni
ENSCPBG00000012105	DDX28	81	52.463	ENSHCOG00000017590	ddx28	81	50.661	Hippocampus_comes
ENSCPBG00000012105	DDX28	86	52.336	ENSIPUG00000017350	Ddx28	81	51.844	Ictalurus_punctatus
ENSCPBG00000012105	DDX28	85	59.861	ENSSTOG00000002064	DDX28	87	59.873	Ictidomys_tridecemlineatus
ENSCPBG00000012105	DDX28	85	57.968	ENSJJAG00000012460	-	89	57.350	Jaculus_jaculus
ENSCPBG00000012105	DDX28	81	50.985	ENSKMAG00000018183	ddx28	82	48.922	Kryptolebias_marmoratus
ENSCPBG00000012105	DDX28	81	50.611	ENSLBEG00000006072	ddx28	82	49.134	Labrus_bergylta
ENSCPBG00000012105	DDX28	81	59.753	ENSLACG00000005578	DDX28	81	56.410	Latimeria_chalumnae
ENSCPBG00000012105	DDX28	82	57.457	ENSLOCG00000017604	ddx28	84	54.989	Lepisosteus_oculatus
ENSCPBG00000012105	DDX28	85	61.072	ENSLAFG00000031239	DDX28	87	60.934	Loxodonta_africana
ENSCPBG00000012105	DDX28	85	59.954	ENSMMUG00000010836	DDX28	86	59.110	Macaca_mulatta
ENSCPBG00000012105	DDX28	81	52.346	ENSMAMG00000020220	ddx28	82	50.216	Mastacembelus_armatus
ENSCPBG00000012105	DDX28	81	54.412	ENSMZEG00005009292	ddx28	82	52.026	Maylandia_zebra
ENSCPBG00000012105	DDX28	85	45.221	ENSMICG00000012346	-	85	46.072	Microcebus_murinus
ENSCPBG00000012105	DDX28	85	60.093	ENSMOCG00000009815	Ddx28	90	59.063	Microtus_ochrogaster
ENSCPBG00000012105	DDX28	81	52.593	ENSMMOG00000000270	ddx28	82	50.980	Mola_mola
ENSCPBG00000012105	DDX28	85	63.256	ENSMODG00000005303	DDX28	88	62.241	Monodelphis_domestica
ENSCPBG00000012105	DDX28	81	54.187	ENSMALG00000008864	ddx28	80	52.759	Monopterus_albus
ENSCPBG00000012105	DDX28	85	60.557	MGP_CAROLIEiJ_G0031510	Ddx28	87	61.359	Mus_caroli
ENSCPBG00000012105	DDX28	85	59.861	ENSMUSG00000045538	Ddx28	87	60.934	Mus_musculus
ENSCPBG00000012105	DDX28	87	60.285	MGP_PahariEiJ_G0023110	Ddx28	90	60.285	Mus_pahari
ENSCPBG00000012105	DDX28	85	60.557	MGP_SPRETEiJ_G0032628	Ddx28	87	61.571	Mus_spretus
ENSCPBG00000012105	DDX28	80	59.091	ENSMPUG00000006915	DDX28	100	59.091	Mustela_putorius_furo
ENSCPBG00000012105	DDX28	84	60.000	ENSMLUG00000005899	DDX28	89	58.178	Myotis_lucifugus
ENSCPBG00000012105	DDX28	85	60.046	ENSNGAG00000015762	Ddx28	87	60.677	Nannospalax_galili
ENSCPBG00000012105	DDX28	81	53.695	ENSNBRG00000001337	ddx28	83	51.836	Neolamprologus_brichardi
ENSCPBG00000012105	DDX28	81	54.054	ENSONIG00000020597	ddx28	82	51.812	Oreochromis_niloticus
ENSCPBG00000012105	DDX28	54	56.777	ENSOANG00000003551	-	95	57.875	Ornithorhynchus_anatinus
ENSCPBG00000012105	DDX28	85	61.343	ENSOCUG00000023074	DDX28	90	59.553	Oryctolagus_cuniculus
ENSCPBG00000012105	DDX28	81	51.852	ENSORLG00000011968	ddx28	83	49.892	Oryzias_latipes
ENSCPBG00000012105	DDX28	81	51.852	ENSORLG00020001951	ddx28	84	49.892	Oryzias_latipes_hni
ENSCPBG00000012105	DDX28	81	51.852	ENSORLG00015023030	ddx28	85	49.041	Oryzias_latipes_hsok
ENSCPBG00000012105	DDX28	85	49.687	ENSOMEG00000012445	ddx28	85	49.687	Oryzias_melastigma
ENSCPBG00000012105	DDX28	85	59.861	ENSOGAG00000016895	DDX28	87	59.660	Otolemur_garnettii
ENSCPBG00000012105	DDX28	85	56.381	ENSOARG00000003313	DDX28	98	57.631	Ovis_aries
ENSCPBG00000012105	DDX28	86	56.322	ENSPPAG00000036971	DDX28	86	56.356	Pan_paniscus
ENSCPBG00000012105	DDX28	85	59.722	ENSPPRG00000018322	DDX28	87	59.746	Panthera_pardus
ENSCPBG00000012105	DDX28	85	59.722	ENSPTIG00000006444	DDX28	85	60.706	Panthera_tigris_altaica
ENSCPBG00000012105	DDX28	86	59.770	ENSPTRG00000008258	DDX28	87	59.534	Pan_troglodytes
ENSCPBG00000012105	DDX28	81	53.731	ENSPKIG00000021200	ddx28	86	51.178	Paramormyrops_kingsleyae
ENSCPBG00000012105	DDX28	58	86.505	ENSPSIG00000001127	DDX28	95	89.437	Pelodiscus_sinensis
ENSCPBG00000012105	DDX28	86	48.037	ENSPMGG00000007908	ddx28	80	48.565	Periophthalmus_magnuspinnatus
ENSCPBG00000012105	DDX28	85	58.430	ENSPEMG00000003395	Ddx28	87	59.197	Peromyscus_maniculatus_bairdii
ENSCPBG00000012105	DDX28	55	48.214	ENSPMAG00000006983	DDX28	95	48.252	Petromyzon_marinus
ENSCPBG00000012105	DDX28	81	53.846	ENSPFOG00000020838	DDX28	81	51.739	Poecilia_formosa
ENSCPBG00000012105	DDX28	81	53.846	ENSPFOG00000020952	ddx28	80	51.739	Poecilia_formosa
ENSCPBG00000012105	DDX28	81	53.598	ENSPLAG00000016292	ddx28	80	51.522	Poecilia_latipinna
ENSCPBG00000012105	DDX28	81	53.846	ENSPMEG00000011311	ddx28	80	51.739	Poecilia_mexicana
ENSCPBG00000012105	DDX28	81	53.598	ENSPREG00000002899	ddx28	80	51.304	Poecilia_reticulata
ENSCPBG00000012105	DDX28	85	59.722	ENSPPYG00000007481	DDX28	87	59.534	Pongo_abelii
ENSCPBG00000012105	DDX28	85	60.325	ENSPCOG00000024632	DDX28	87	59.660	Propithecus_coquereli
ENSCPBG00000012105	DDX28	81	53.808	ENSPNYG00000018804	ddx28	82	51.599	Pundamilia_nyererei
ENSCPBG00000012105	DDX28	88	50.801	ENSPNAG00000014597	ddx28	87	50.955	Pygocentrus_nattereri
ENSCPBG00000012105	DDX28	87	58.656	ENSRNOG00000019817	Ddx28	90	58.656	Rattus_norvegicus
ENSCPBG00000012105	DDX28	86	52.093	ENSSFOG00015010181	ddx28	84	51.717	Scleropages_formosus
ENSCPBG00000012105	DDX28	81	53.580	ENSSMAG00000006831	ddx28	86	50.972	Scophthalmus_maximus
ENSCPBG00000012105	DDX28	81	52.099	ENSSDUG00000003257	ddx28	81	49.460	Seriola_dumerili
ENSCPBG00000012105	DDX28	85	48.554	ENSSLDG00000004513	ddx28	81	49.676	Seriola_lalandi_dorsalis
ENSCPBG00000012105	DDX28	85	61.253	ENSSARG00000014169	DDX28	87	60.897	Sorex_araneus
ENSCPBG00000012105	DDX28	81	53.202	ENSSPAG00000000988	ddx28	82	51.193	Stegastes_partitus
ENSCPBG00000012105	DDX28	85	59.861	ENSSSCG00000026038	DDX28	90	58.367	Sus_scrofa
ENSCPBG00000012105	DDX28	81	50.617	ENSTRUG00000007815	ddx28	83	49.782	Takifugu_rubripes
ENSCPBG00000012105	DDX28	79	52.020	ENSTNIG00000011352	ddx28	91	49.345	Tetraodon_nigroviridis
ENSCPBG00000012105	DDX28	73	67.290	ENSTBEG00000017695	DDX28	73	67.943	Tupaia_belangeri
ENSCPBG00000012105	DDX28	88	58.400	ENSUAMG00000016116	DDX28	90	58.400	Ursus_americanus
ENSCPBG00000012105	DDX28	85	60.233	ENSUMAG00000019200	DDX28	96	57.411	Ursus_maritimus
ENSCPBG00000012105	DDX28	66	57.256	ENSVVUG00000012876	DDX28	75	57.256	Vulpes_vulpes
ENSCPBG00000012105	DDX28	81	52.346	ENSXETG00000005435	ddx28	89	51.204	Xenopus_tropicalis
ENSCPBG00000012105	DDX28	81	53.350	ENSXCOG00000012364	ddx28	81	51.304	Xiphophorus_couchianus
ENSCPBG00000012105	DDX28	81	53.102	ENSXMAG00000019603	ddx28	83	51.087	Xiphophorus_maculatus