EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000012151 (Gene tree)
Gene ID: 101946542
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Minus strand
Length: 207839 bases
Position: chrKK083191.1:328773-536611
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000016481	KH_1	PF00013.29	1.4e-55	1	3
ENSCPBP00000016481	KH_1	PF00013.29	1.4e-55	2	3
ENSCPBP00000016481	KH_1	PF00013.29	1.4e-55	3	3
ENSCPBP00000016486	KH_1	PF00013.29	1.5e-55	1	3
ENSCPBP00000016486	KH_1	PF00013.29	1.5e-55	2	3
ENSCPBP00000016486	KH_1	PF00013.29	1.5e-55	3	3
ENSCPBP00000016489	KH_1	PF00013.29	1.5e-55	1	3
ENSCPBP00000016489	KH_1	PF00013.29	1.5e-55	2	3
ENSCPBP00000016489	KH_1	PF00013.29	1.5e-55	3	3
ENSCPBP00000016479	KH_1	PF00013.29	1.8e-55	1	3
ENSCPBP00000016479	KH_1	PF00013.29	1.8e-55	2	3
ENSCPBP00000016479	KH_1	PF00013.29	1.8e-55	3	3
ENSCPBP00000016482	KH_1	PF00013.29	1.8e-55	1	3
ENSCPBP00000016482	KH_1	PF00013.29	1.8e-55	2	3
ENSCPBP00000016482	KH_1	PF00013.29	1.8e-55	3	3
ENSCPBP00000016486	KH_2	PF07650.17	9.1e-16	1	1
ENSCPBP00000016489	KH_2	PF07650.17	9.1e-16	1	1
ENSCPBP00000016479	KH_2	PF07650.17	1.4e-15	1	1
ENSCPBP00000016482	KH_2	PF07650.17	1.4e-15	1	1
ENSCPBP00000016481	KH_2	PF07650.17	2.5e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000019492	-	1707	-	ENSCPBP00000016479	356 (aa)	-	-
ENSCPBT00000019503	-	1997	-	ENSCPBP00000016489	339 (aa)	-	UPI0002038475
ENSCPBT00000019499	-	2163	-	ENSCPBP00000016486	339 (aa)	-	UPI0002038475
ENSCPBT00000019494	-	1647	-	ENSCPBP00000016481	336 (aa)	-	-
ENSCPBT00000019495	-	1660	-	ENSCPBP00000016482	356 (aa)	-	-

Gene Model

Click here to download ENSCPBG00000012151's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000012151's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000012151	-	97	80.342	ENSCPBG00000000733	-	69	93.750
ENSCPBG00000012151	-	90	36.029	ENSCPBG00000007370	IGF2BP2	60	37.410
ENSCPBG00000012151	-	99	76.923	ENSCPBG00000001467	PCBP2	97	81.935
ENSCPBG00000012151	-	95	32.000	ENSCPBG00000022635	FUBP3	64	41.270
ENSCPBG00000012151	-	86	39.062	ENSCPBG00000016987	-	51	39.062
ENSCPBG00000012151	-	73	31.897	ENSCPBG00000005286	KHSRP	51	37.143
ENSCPBG00000012151	-	70	42.254	ENSCPBG00000007153	NOVA2	50	42.254
ENSCPBG00000012151	-	94	40.351	ENSCPBG00000027677	NOVA1	66	40.351
ENSCPBG00000012151	-	74	52.857	ENSCPBG00000021776	HNRNPK	57	52.857
ENSCPBG00000012151	-	89	34.307	ENSCPBG00000022464	IGF2BP3	65	32.593
ENSCPBG00000012151	-	97	63.110	ENSCPBG00000016554	PCBP4	72	67.208

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000012151	-	98	86.486	ENSAPOG00000020003	pcbp3	84	94.059	Acanthochromis_polyacanthus
ENSCPBG00000012151	-	95	93.438	ENSAPOG00000016582	-	98	93.438	Acanthochromis_polyacanthus
ENSCPBG00000012151	-	100	94.100	ENSAMEG00000001697	-	92	94.100	Ailuropoda_melanoleuca
ENSCPBG00000012151	-	95	83.673	ENSACIG00000010933	pcbp3	98	83.673	Amphilophus_citrinellus
ENSCPBG00000012151	-	99	87.390	ENSACIG00000002739	-	95	92.926	Amphilophus_citrinellus
ENSCPBG00000012151	-	90	96.700	ENSAOCG00000008592	-	96	96.700	Amphiprion_ocellaris
ENSCPBG00000012151	-	96	91.694	ENSAOCG00000007806	-	100	91.694	Amphiprion_ocellaris
ENSCPBG00000012151	-	99	90.120	ENSAPEG00000005209	-	95	96.053	Amphiprion_percula
ENSCPBG00000012151	-	95	85.507	ENSAPEG00000008011	pcbp3	98	85.507	Amphiprion_percula
ENSCPBG00000012151	-	99	89.521	ENSATEG00000009833	-	95	95.395	Anabas_testudineus
ENSCPBG00000012151	-	90	87.423	ENSATEG00000015787	-	98	87.423	Anabas_testudineus
ENSCPBG00000012151	-	97	75.000	ENSAPLG00000008951	-	80	79.213	Anas_platyrhynchos
ENSCPBG00000012151	-	100	94.690	ENSAPLG00000002975	-	100	94.690	Anas_platyrhynchos
ENSCPBG00000012151	-	99	80.886	ENSACAG00000009819	-	96	85.801	Anolis_carolinensis
ENSCPBG00000012151	-	100	89.503	ENSACAG00000004607	-	100	89.503	Anolis_carolinensis
ENSCPBG00000012151	-	96	91.085	ENSANAG00000030702	-	96	98.684	Aotus_nancymaae
ENSCPBG00000012151	-	99	91.317	ENSACLG00000003801	-	95	97.368	Astatotilapia_calliptera
ENSCPBG00000012151	-	95	85.507	ENSACLG00000011835	pcbp3	98	85.507	Astatotilapia_calliptera
ENSCPBG00000012151	-	97	63.611	ENSAMXG00000001760	zgc:110045	73	67.353	Astyanax_mexicanus
ENSCPBG00000012151	-	95	87.172	ENSAMXG00000003440	pcbp3	98	87.172	Astyanax_mexicanus
ENSCPBG00000012151	-	90	92.409	ENSAMXG00000013588	-	98	92.409	Astyanax_mexicanus
ENSCPBG00000012151	-	88	98.718	ENSCAFG00020019472	-	83	98.718	Canis_lupus_dingo
ENSCPBG00000012151	-	100	92.920	ENSCSAG00000007440	-	88	99.029	Chlorocebus_sabaeus
ENSCPBG00000012151	-	90	92.739	ENSCSEG00000000822	pcbp3	97	92.739	Cynoglossus_semilaevis
ENSCPBG00000012151	-	99	77.971	ENSCSEG00000016984	-	98	77.971	Cynoglossus_semilaevis
ENSCPBG00000012151	-	95	85.217	ENSCVAG00000014482	pcbp3	98	85.217	Cyprinodon_variegatus
ENSCPBG00000012151	-	99	91.420	ENSCVAG00000005262	-	96	97.403	Cyprinodon_variegatus
ENSCPBG00000012151	-	99	86.150	ENSDARG00000054378	pcbp3	96	91.239	Danio_rerio
ENSCPBG00000012151	-	100	80.236	ENSETEG00000015988	-	97	84.790	Echinops_telfairi
ENSCPBG00000012151	-	96	69.900	ENSEBUG00000016192	pcbp3	99	75.093	Eptatretus_burgeri
ENSCPBG00000012151	-	98	77.448	ENSEBUG00000007485	-	92	83.105	Eptatretus_burgeri
ENSCPBG00000012151	-	92	75.556	ENSEBUG00000005495	pcbp3	73	71.138	Eptatretus_burgeri
ENSCPBG00000012151	-	95	86.297	ENSELUG00000003521	pcbp3	96	87.500	Esox_lucius
ENSCPBG00000012151	-	95	93.417	ENSELUG00000001560	-	88	93.417	Esox_lucius
ENSCPBG00000012151	-	100	93.215	ENSFALG00000003949	-	97	99.353	Ficedula_albicollis
ENSCPBG00000012151	-	97	75.000	ENSFALG00000004411	-	75	79.213	Ficedula_albicollis
ENSCPBG00000012151	-	99	89.349	ENSFHEG00000006539	-	96	95.130	Fundulus_heteroclitus
ENSCPBG00000012151	-	92	92.857	ENSFHEG00000016615	pcbp3	94	92.857	Fundulus_heteroclitus
ENSCPBG00000012151	-	95	70.859	ENSGMOG00000008611	-	98	70.859	Gadus_morhua
ENSCPBG00000012151	-	96	80.793	ENSGMOG00000011992	pcbp3	95	80.793	Gadus_morhua
ENSCPBG00000012151	-	99	79.722	ENSGALG00000013155	-	98	83.742	Gallus_gallus
ENSCPBG00000012151	-	100	91.160	ENSGALG00000004394	-	100	91.160	Gallus_gallus
ENSCPBG00000012151	-	95	93.125	ENSGAFG00000010274	-	98	93.125	Gambusia_affinis
ENSCPBG00000012151	-	97	80.057	ENSGAFG00000011430	pcbp3	94	85.583	Gambusia_affinis
ENSCPBG00000012151	-	99	78.992	ENSGACG00000014955	-	98	78.992	Gasterosteus_aculeatus
ENSCPBG00000012151	-	99	91.071	ENSGACG00000002266	-	98	91.071	Gasterosteus_aculeatus
ENSCPBG00000012151	-	87	91.760	ENSGAGG00000000271	-	100	91.760	Gopherus_agassizii
ENSCPBG00000012151	-	82	90.256	ENSGAGG00000006956	-	78	90.256	Gopherus_agassizii
ENSCPBG00000012151	-	99	91.317	ENSHBUG00000021782	-	95	97.368	Haplochromis_burtoni
ENSCPBG00000012151	-	90	93.399	ENSHBUG00000010697	pcbp3	96	93.399	Haplochromis_burtoni
ENSCPBG00000012151	-	95	85.465	ENSHCOG00000017868	pcbp3	98	85.465	Hippocampus_comes
ENSCPBG00000012151	-	99	87.425	ENSHCOG00000006067	-	95	93.421	Hippocampus_comes
ENSCPBG00000012151	-	99	89.645	ENSIPUG00000006238	pcbp3	96	95.455	Ictalurus_punctatus
ENSCPBG00000012151	-	95	92.500	ENSKMAG00000018530	-	98	92.500	Kryptolebias_marmoratus
ENSCPBG00000012151	-	95	85.507	ENSKMAG00000003046	pcbp3	98	85.507	Kryptolebias_marmoratus
ENSCPBG00000012151	-	98	87.009	ENSLBEG00000006201	pcbp3	95	92.532	Labrus_bergylta
ENSCPBG00000012151	-	99	76.106	ENSLBEG00000006542	-	98	76.923	Labrus_bergylta
ENSCPBG00000012151	-	97	75.067	ENSLACG00000010804	zgc:110045	74	79.320	Latimeria_chalumnae
ENSCPBG00000012151	-	99	81.365	ENSLACG00000010386	pcbp3	80	81.365	Latimeria_chalumnae
ENSCPBG00000012151	-	100	93.215	ENSLOCG00000009369	pcbp3	100	93.215	Lepisosteus_oculatus
ENSCPBG00000012151	-	97	79.487	ENSLOCG00000005058	zgc:110045	81	84.036	Lepisosteus_oculatus
ENSCPBG00000012151	-	90	93.729	ENSMAMG00000022336	pcbp3	91	93.729	Mastacembelus_armatus
ENSCPBG00000012151	-	99	88.922	ENSMAMG00000011620	-	95	94.737	Mastacembelus_armatus
ENSCPBG00000012151	-	95	83.673	ENSMZEG00005008993	pcbp3	96	86.239	Maylandia_zebra
ENSCPBG00000012151	-	99	82.421	ENSMZEG00005014882	-	98	83.686	Maylandia_zebra
ENSCPBG00000012151	-	97	82.303	ENSMGAG00000001883	-	97	83.714	Meleagris_gallopavo
ENSCPBG00000012151	-	97	75.266	ENSMGAG00000006794	-	75	79.494	Meleagris_gallopavo
ENSCPBG00000012151	-	90	92.787	ENSMMOG00000000730	pcbp3	86	92.787	Mola_mola
ENSCPBG00000012151	-	99	88.623	ENSMMOG00000005216	-	95	94.737	Mola_mola
ENSCPBG00000012151	-	69	88.318	ENSMODG00000027884	-	97	85.586	Monodelphis_domestica
ENSCPBG00000012151	-	93	85.075	ENSMALG00000000691	pcbp3	96	85.075	Monopterus_albus
ENSCPBG00000012151	-	100	88.201	ENSMPUG00000001779	-	92	88.201	Mustela_putorius_furo
ENSCPBG00000012151	-	99	82.235	ENSNBRG00000016714	-	97	85.494	Neolamprologus_brichardi
ENSCPBG00000012151	-	95	83.382	ENSNBRG00000016409	-	98	83.382	Neolamprologus_brichardi
ENSCPBG00000012151	-	96	88.857	ENSOPRG00000003431	-	100	88.857	Ochotona_princeps
ENSCPBG00000012151	-	95	85.260	ENSONIG00000012122	-	96	85.260	Oreochromis_niloticus
ENSCPBG00000012151	-	99	91.317	ENSONIG00000004611	-	95	97.368	Oreochromis_niloticus
ENSCPBG00000012151	-	100	92.625	ENSOCUG00000002696	-	88	98.382	Oryctolagus_cuniculus
ENSCPBG00000012151	-	90	96.700	ENSORLG00000000059	pcbp3	98	96.700	Oryzias_latipes
ENSCPBG00000012151	-	99	91.617	ENSORLG00000022739	-	95	97.697	Oryzias_latipes
ENSCPBG00000012151	-	98	89.458	ENSORLG00020012671	pcbp3	95	96.700	Oryzias_latipes_hni
ENSCPBG00000012151	-	99	91.317	ENSORLG00020006124	-	95	97.368	Oryzias_latipes_hni
ENSCPBG00000012151	-	98	89.458	ENSORLG00015000429	pcbp3	95	96.700	Oryzias_latipes_hsok
ENSCPBG00000012151	-	95	94.025	ENSORLG00015008051	-	97	94.025	Oryzias_latipes_hsok
ENSCPBG00000012151	-	96	87.419	ENSOMEG00000020811	pcbp3	97	95.018	Oryzias_melastigma
ENSCPBG00000012151	-	99	91.317	ENSOMEG00000020162	-	95	97.368	Oryzias_melastigma
ENSCPBG00000012151	-	100	86.141	ENSOGAG00000008044	-	100	86.141	Otolemur_garnettii
ENSCPBG00000012151	-	99	90.120	ENSPKIG00000019329	pcbp3	95	96.382	Paramormyrops_kingsleyae
ENSCPBG00000012151	-	83	84.103	ENSPKIG00000020913	-	84	84.103	Paramormyrops_kingsleyae
ENSCPBG00000012151	-	100	84.548	ENSPSIG00000014970	-	100	85.131	Pelodiscus_sinensis
ENSCPBG00000012151	-	87	83.333	ENSPSIG00000008350	-	68	83.333	Pelodiscus_sinensis
ENSCPBG00000012151	-	93	87.425	ENSPMGG00000022383	pcbp3	96	87.425	Periophthalmus_magnuspinnatus
ENSCPBG00000012151	-	84	89.119	ENSPMAG00000004637	-	100	89.119	Petromyzon_marinus
ENSCPBG00000012151	-	98	70.359	ENSPMAG00000004551	pcbp3	93	73.089	Petromyzon_marinus
ENSCPBG00000012151	-	100	87.845	ENSPCIG00000028092	-	99	94.144	Phascolarctos_cinereus
ENSCPBG00000012151	-	97	81.020	ENSPLAG00000011449	pcbp3	87	81.020	Poecilia_latipinna
ENSCPBG00000012151	-	99	90.120	ENSPLAG00000004074	-	91	90.120	Poecilia_latipinna
ENSCPBG00000012151	-	93	86.686	ENSPMEG00000021239	pcbp3	96	86.686	Poecilia_mexicana
ENSCPBG00000012151	-	100	86.080	ENSPMEG00000006653	-	100	86.364	Poecilia_mexicana
ENSCPBG00000012151	-	99	89.521	ENSPREG00000020585	-	95	95.395	Poecilia_reticulata
ENSCPBG00000012151	-	90	91.803	ENSPREG00000015736	pcbp3	97	91.803	Poecilia_reticulata
ENSCPBG00000012151	-	99	88.922	ENSPNYG00000013205	-	95	94.737	Pundamilia_nyererei
ENSCPBG00000012151	-	90	93.729	ENSPNYG00000012326	pcbp3	93	93.729	Pundamilia_nyererei
ENSCPBG00000012151	-	90	93.023	ENSPNAG00000008541	-	96	93.023	Pygocentrus_nattereri
ENSCPBG00000012151	-	99	91.716	ENSPNAG00000015104	pcbp3	96	97.727	Pygocentrus_nattereri
ENSCPBG00000012151	-	100	93.215	ENSRNOG00000001245	Pcbp3	97	99.029	Rattus_norvegicus
ENSCPBG00000012151	-	100	86.628	ENSRBIG00000028177	-	100	82.620	Rhinopithecus_bieti
ENSCPBG00000012151	-	100	99.115	ENSSHAG00000007890	-	100	99.115	Sarcophilus_harrisii
ENSCPBG00000012151	-	99	78.994	ENSSFOG00015007118	-	94	85.342	Scleropages_formosus
ENSCPBG00000012151	-	90	97.697	ENSSFOG00015010205	pcbp3	93	97.697	Scleropages_formosus
ENSCPBG00000012151	-	96	84.150	ENSSFOG00015014706	pcbp3	93	89.297	Scleropages_formosus
ENSCPBG00000012151	-	92	92.258	ENSSMAG00000011929	pcbp3	97	92.258	Scophthalmus_maximus
ENSCPBG00000012151	-	99	91.617	ENSSMAG00000003135	-	95	97.697	Scophthalmus_maximus
ENSCPBG00000012151	-	95	82.081	ENSSDUG00000011608	pcbp3	97	86.585	Seriola_dumerili
ENSCPBG00000012151	-	95	86.997	ENSSDUG00000008502	-	98	86.997	Seriola_dumerili
ENSCPBG00000012151	-	95	82.081	ENSSLDG00000008518	pcbp3	97	86.585	Seriola_lalandi_dorsalis
ENSCPBG00000012151	-	95	93.438	ENSSLDG00000020161	-	98	93.438	Seriola_lalandi_dorsalis
ENSCPBG00000012151	-	86	85.854	ENSSPUG00000013214	-	92	85.854	Sphenodon_punctatus
ENSCPBG00000012151	-	96	92.027	ENSSPAG00000004190	-	100	92.027	Stegastes_partitus
ENSCPBG00000012151	-	95	72.886	ENSSPAG00000023341	-	98	72.886	Stegastes_partitus
ENSCPBG00000012151	-	100	96.460	ENSTGUG00000003316	-	100	96.460	Taeniopygia_guttata
ENSCPBG00000012151	-	99	86.095	ENSTGUG00000008158	-	97	91.883	Taeniopygia_guttata
ENSCPBG00000012151	-	95	86.787	ENSTRUG00000013604	pcbp3	98	86.787	Takifugu_rubripes
ENSCPBG00000012151	-	96	90.909	ENSTRUG00000006280	-	89	97.482	Takifugu_rubripes
ENSCPBG00000012151	-	100	91.713	ENSTTRG00000015075	-	100	91.713	Tursiops_truncatus
ENSCPBG00000012151	-	92	76.420	ENSXETG00000010491	pcbp2	77	76.420	Xenopus_tropicalis
ENSCPBG00000012151	-	100	92.920	ENSXETG00000011483	pcbp1	100	92.920	Xenopus_tropicalis
ENSCPBG00000012151	-	93	86.686	ENSXCOG00000020481	pcbp3	96	86.686	Xiphophorus_couchianus
ENSCPBG00000012151	-	95	85.507	ENSXMAG00000008175	pcbp3	98	85.507	Xiphophorus_maculatus
ENSCPBG00000012151	-	95	93.438	ENSXMAG00000028711	-	98	93.438	Xiphophorus_maculatus