EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPBG00000012293 (Gene tree)
Gene ID: -
Gene Symbol: SRRM4
Alias: KIAA1853|nSR100
Full Name: serine/arginine repetitive matrix 4
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Plus strand
Length: 307803 bases
Position: chrKK082991.1:3655525-3963327
Accession: 29389
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000016722	SRRM_C	PF15230.6	1.9e-28	1	1
ENSCPBP00000016718	SRRM_C	PF15230.6	4.2e-28	1	1
ENSCPBP00000016709	SRRM_C	PF15230.6	4.6e-28	1	1
ENSCPBP00000016706	SRRM_C	PF15230.6	4.7e-28	1	1
ENSCPBP00000016713	SRRM_C	PF15230.6	4.7e-28	1	1
ENSCPBP00000016716	SRRM_C	PF15230.6	4.7e-28	1	1
ENSCPBP00000016711	SRRM_C	PF15230.6	4.7e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000019768	SRRM4-207	2083	-	ENSCPBP00000016722	360 (aa)	-	-
ENSCPBT00000019754	SRRM4-202	2996	-	ENSCPBP00000016709	605 (aa)	-	-
ENSCPBT00000019757	SRRM4-203	3104	-	ENSCPBP00000016711	624 (aa)	-	-
ENSCPBT00000019751	SRRM4-201	3099	-	ENSCPBP00000016706	611 (aa)	-	-
ENSCPBT00000019764	SRRM4-206	2770	-	ENSCPBP00000016718	589 (aa)	-	-
ENSCPBT00000019762	SRRM4-205	3347	-	ENSCPBP00000016716	615 (aa)	-	-
ENSCPBT00000019759	SRRM4-204	2571	-	ENSCPBP00000016713	615 (aa)	-	-

Gene Model

Click here to download ENSCPBG00000012293's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000012293's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000012293	SRRM4	88	61.243	ENSG00000139767	SRRM4	85	60.662	Homo_sapiens
ENSCPBG00000012293	SRRM4	82	61.983	ENSAMEG00000016072	SRRM4	86	59.714	Ailuropoda_melanoleuca
ENSCPBG00000012293	SRRM4	87	76.111	ENSAPLG00000009202	SRRM4	91	74.217	Anas_platyrhynchos
ENSCPBG00000012293	SRRM4	87	56.434	ENSACAG00000004139	SRRM4	88	54.098	Anolis_carolinensis
ENSCPBG00000012293	SRRM4	79	61.324	ENSANAG00000020333	SRRM4	58	59.587	Aotus_nancymaae
ENSCPBG00000012293	SRRM4	65	57.921	ENSBTAG00000008676	SRRM4	87	62.500	Bos_taurus
ENSCPBG00000012293	SRRM4	88	61.949	ENSCJAG00000009146	SRRM4	85	61.029	Callithrix_jacchus
ENSCPBG00000012293	SRRM4	87	63.838	ENSCAFG00000023113	SRRM4	86	61.765	Canis_familiaris
ENSCPBG00000012293	SRRM4	78	60.000	ENSCAFG00020018665	SRRM4	56	58.702	Canis_lupus_dingo
ENSCPBG00000012293	SRRM4	65	40.976	ENSCHIG00000019151	SRRM4	57	59.531	Capra_hircus
ENSCPBG00000012293	SRRM4	80	62.083	ENSTSYG00000012239	SRRM4	80	58.836	Carlito_syrichta
ENSCPBG00000012293	SRRM4	76	60.294	ENSCAPG00000008729	SRRM4	84	58.531	Cavia_aperea
ENSCPBG00000012293	SRRM4	88	59.519	ENSCPOG00000003544	SRRM4	86	60.813	Cavia_porcellus
ENSCPBG00000012293	SRRM4	88	61.949	ENSCCAG00000022479	SRRM4	86	61.029	Cebus_capucinus
ENSCPBG00000012293	SRRM4	88	60.695	ENSCATG00000036343	SRRM4	85	60.256	Cercocebus_atys
ENSCPBG00000012293	SRRM4	87	62.222	ENSCLAG00000009764	SRRM4	85	62.107	Chinchilla_lanigera
ENSCPBG00000012293	SRRM4	88	60.695	ENSCSAG00000002300	SRRM4	85	60.256	Chlorocebus_sabaeus
ENSCPBG00000012293	SRRM4	79	60.976	ENSCANG00000031719	SRRM4	85	56.410	Colobus_angolensis_palliatus
ENSCPBG00000012293	SRRM4	87	63.216	ENSCGRG00001000544	Srrm4	52	60.234	Cricetulus_griseus_chok1gshd
ENSCPBG00000012293	SRRM4	87	61.781	ENSDNOG00000000260	SRRM4	88	61.922	Dasypus_novemcinctus
ENSCPBG00000012293	SRRM4	88	54.265	ENSDORG00000015243	Srrm4	66	55.283	Dipodomys_ordii
ENSCPBG00000012293	SRRM4	87	61.070	ENSEASG00005008759	SRRM4	87	61.213	Equus_asinus_asinus
ENSCPBG00000012293	SRRM4	87	61.255	ENSECAG00000021729	SRRM4	87	61.397	Equus_caballus
ENSCPBG00000012293	SRRM4	87	63.451	ENSFCAG00000010536	SRRM4	84	61.131	Felis_catus
ENSCPBG00000012293	SRRM4	67	75.300	ENSFALG00000007700	SRRM4	89	76.051	Ficedula_albicollis
ENSCPBG00000012293	SRRM4	87	57.356	ENSFDAG00000007218	SRRM4	85	60.332	Fukomys_damarensis
ENSCPBG00000012293	SRRM4	84	93.387	ENSGAGG00000017218	SRRM4	87	89.414	Gopherus_agassizii
ENSCPBG00000012293	SRRM4	88	61.243	ENSGGOG00000005338	SRRM4	85	60.662	Gorilla_gorilla
ENSCPBG00000012293	SRRM4	87	60.517	ENSHGLG00000007830	SRRM4	86	60.405	Heterocephalus_glaber_female
ENSCPBG00000012293	SRRM4	86	55.098	ENSJJAG00000016448	Srrm4	82	54.159	Jaculus_jaculus
ENSCPBG00000012293	SRRM4	87	62.825	ENSLAFG00000003731	SRRM4	85	61.808	Loxodonta_africana
ENSCPBG00000012293	SRRM4	88	60.695	ENSMFAG00000041271	SRRM4	84	60.256	Macaca_fascicularis
ENSCPBG00000012293	SRRM4	86	51.838	ENSMMUG00000021230	SRRM4	59	53.439	Macaca_mulatta
ENSCPBG00000012293	SRRM4	88	60.695	ENSMNEG00000044154	SRRM4	85	60.256	Macaca_nemestrina
ENSCPBG00000012293	SRRM4	88	60.512	ENSMLEG00000034455	SRRM4	85	60.256	Mandrillus_leucophaeus
ENSCPBG00000012293	SRRM4	87	71.910	ENSMGAG00000009082	SRRM4	87	73.013	Meleagris_gallopavo
ENSCPBG00000012293	SRRM4	87	63.031	ENSMAUG00000013203	Srrm4	55	60.641	Mesocricetus_auratus
ENSCPBG00000012293	SRRM4	88	62.132	ENSMICG00000012386	SRRM4	85	62.868	Microcebus_murinus
ENSCPBG00000012293	SRRM4	87	59.150	ENSMOCG00000006737	Srrm4	86	62.637	Microtus_ochrogaster
ENSCPBG00000012293	SRRM4	87	55.867	ENSMODG00000015283	SRRM4	52	54.839	Monodelphis_domestica
ENSCPBG00000012293	SRRM4	87	62.018	MGP_CAROLIEiJ_G0027638	Srrm4	75	61.938	Mus_caroli
ENSCPBG00000012293	SRRM4	87	61.765	ENSMUSG00000063919	Srrm4	52	59.531	Mus_musculus
ENSCPBG00000012293	SRRM4	65	57.882	MGP_PahariEiJ_G0024219	Srrm4	75	62.630	Mus_pahari
ENSCPBG00000012293	SRRM4	87	61.835	MGP_SPRETEiJ_G0028637	Srrm4	52	59.531	Mus_spretus
ENSCPBG00000012293	SRRM4	66	61.671	ENSMPUG00000002930	SRRM4	87	61.581	Mustela_putorius_furo
ENSCPBG00000012293	SRRM4	88	61.765	ENSNGAG00000020807	Srrm4	87	61.314	Nannospalax_galili
ENSCPBG00000012293	SRRM4	88	61.243	ENSNLEG00000000200	SRRM4	85	60.662	Nomascus_leucogenys
ENSCPBG00000012293	SRRM4	87	59.665	ENSOPRG00000016981	SRRM4	77	60.221	Ochotona_princeps
ENSCPBG00000012293	SRRM4	87	62.477	ENSODEG00000006291	SRRM4	85	60.813	Octodon_degus
ENSCPBG00000012293	SRRM4	87	61.224	ENSOCUG00000004503	SRRM4	59	60.688	Oryctolagus_cuniculus
ENSCPBG00000012293	SRRM4	88	62.132	ENSOGAG00000015431	SRRM4	85	61.397	Otolemur_garnettii
ENSCPBG00000012293	SRRM4	62	53.826	ENSOARG00000002063	SRRM4	87	62.684	Ovis_aries
ENSCPBG00000012293	SRRM4	83	59.596	ENSPPAG00000028134	SRRM4	80	59.329	Pan_paniscus
ENSCPBG00000012293	SRRM4	87	63.265	ENSPPRG00000002659	SRRM4	84	61.213	Panthera_pardus
ENSCPBG00000012293	SRRM4	88	61.243	ENSPTRG00000005517	SRRM4	85	60.662	Pan_troglodytes
ENSCPBG00000012293	SRRM4	88	61.213	ENSPANG00000022544	SRRM4	99	59.551	Papio_anubis
ENSCPBG00000012293	SRRM4	87	62.847	ENSPEMG00000001823	Srrm4	57	60.234	Peromyscus_maniculatus_bairdii
ENSCPBG00000012293	SRRM4	79	61.538	ENSPPYG00000005014	SRRM4	51	61.189	Pongo_abelii
ENSCPBG00000012293	SRRM4	88	61.243	ENSPCOG00000013803	SRRM4	87	62.500	Propithecus_coquereli
ENSCPBG00000012293	SRRM4	83	60.569	ENSPVAG00000017487	SRRM4	84	58.740	Pteropus_vampyrus
ENSCPBG00000012293	SRRM4	65	58.374	ENSRNOG00000001141	Srrm4	52	59.649	Rattus_norvegicus
ENSCPBG00000012293	SRRM4	79	60.279	ENSRBIG00000040107	SRRM4	55	58.651	Rhinopithecus_bieti
ENSCPBG00000012293	SRRM4	79	60.976	ENSRROG00000035868	SRRM4	56	59.238	Rhinopithecus_roxellana
ENSCPBG00000012293	SRRM4	88	59.375	ENSSBOG00000035310	SRRM4	63	57.951	Saimiri_boliviensis_boliviensis
ENSCPBG00000012293	SRRM4	83	66.934	ENSSHAG00000017330	SRRM4	87	66.667	Sarcophilus_harrisii
ENSCPBG00000012293	SRRM4	79	62.369	ENSSARG00000012647	SRRM4	56	60.177	Sorex_araneus
ENSCPBG00000012293	SRRM4	88	61.949	ENSSSCG00000009845	SRRM4	85	61.029	Sus_scrofa
ENSCPBG00000012293	SRRM4	78	71.678	ENSTGUG00000009228	SRRM4	91	72.545	Taeniopygia_guttata
ENSCPBG00000012293	SRRM4	78	60.000	ENSVVUG00000013334	SRRM4	74	60.135	Vulpes_vulpes
ENSCPBG00000012293	SRRM4	64	50.000	ENSXETG00000019934	SRRM4	97	54.463	Xenopus_tropicalis