EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000012459 (Gene tree)
Gene ID: 101945718
Gene Symbol: CHD9
Alias: BC022889|FLJ12178|KIAA0308
Full Name: chromodomain helicase DNA binding protein 9
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Minus strand
Length: 161958 bases
Position: chr15:7338715-7500672
Accession: 25701
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000022200	ResIII	PF04851.15	8e-07	1	1
ENSCPBP00000022242	ResIII	PF04851.15	1.2e-06	1	1
ENSCPBP00000022232	ResIII	PF04851.15	1.8e-06	1	1
ENSCPBP00000022214	ResIII	PF04851.15	1.9e-06	1	1
ENSCPBP00000022226	ResIII	PF04851.15	1.9e-06	1	1
ENSCPBP00000022217	ResIII	PF04851.15	2e-06	1	1
ENSCPBP00000022238	ResIII	PF04851.15	6.3e-06	1	1
ENSCPBP00000022236	ResIII	PF04851.15	6.8e-06	1	1
ENSCPBP00000022181	ResIII	PF04851.15	7.2e-06	1	1
ENSCPBP00000022174	ResIII	PF04851.15	7.2e-06	1	1
ENSCPBP00000022232	BRK	PF07533.16	3.8e-33	1	2
ENSCPBP00000022232	BRK	PF07533.16	3.8e-33	2	2
ENSCPBP00000022226	BRK	PF07533.16	3.9e-33	1	2
ENSCPBP00000022226	BRK	PF07533.16	3.9e-33	2	2
ENSCPBP00000022217	BRK	PF07533.16	3.9e-33	1	2
ENSCPBP00000022217	BRK	PF07533.16	3.9e-33	2	2
ENSCPBP00000022214	BRK	PF07533.16	4.1e-33	1	2
ENSCPBP00000022214	BRK	PF07533.16	4.1e-33	2	2
ENSCPBP00000022238	BRK	PF07533.16	4.4e-33	1	2
ENSCPBP00000022238	BRK	PF07533.16	4.4e-33	2	2
ENSCPBP00000022200	BRK	PF07533.16	4.4e-33	1	2
ENSCPBP00000022200	BRK	PF07533.16	4.4e-33	2	2
ENSCPBP00000022236	BRK	PF07533.16	5e-33	1	2
ENSCPBP00000022236	BRK	PF07533.16	5e-33	2	2
ENSCPBP00000022181	BRK	PF07533.16	5.5e-33	1	2
ENSCPBP00000022181	BRK	PF07533.16	5.5e-33	2	2
ENSCPBP00000022174	BRK	PF07533.16	5.6e-33	1	2
ENSCPBP00000022174	BRK	PF07533.16	5.6e-33	2	2
ENSCPBP00000022242	BRK	PF07533.16	1.1e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000026109	CHD9-202	8631	-	ENSCPBP00000022181	2876 (aa)	-	-
ENSCPBT00000026102	CHD9-201	8652	-	ENSCPBP00000022174	2883 (aa)	-	-
ENSCPBT00000026180	CHD9-207	7356	-	ENSCPBP00000022232	2451 (aa)	-	-
ENSCPBT00000026191	CHD9-210	7275	-	ENSCPBP00000022242	2424 (aa)	-	-
ENSCPBT00000026157	CHD9-204	7563	-	ENSCPBP00000022214	2520 (aa)	-	-
ENSCPBT00000026143	CHD9-203	7752	-	ENSCPBP00000022200	2583 (aa)	-	-
ENSCPBT00000026184	CHD9-208	8229	-	ENSCPBP00000022236	2742 (aa)	-	-
ENSCPBT00000026174	CHD9-206	7383	-	ENSCPBP00000022226	2460 (aa)	-	-
ENSCPBT00000026165	CHD9-205	7434	-	ENSCPBP00000022217	2477 (aa)	-	-
ENSCPBT00000026187	CHD9-209	7806	-	ENSCPBP00000022238	2601 (aa)	-	-

Gene Model

Click here to download ENSCPBG00000012459's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000012459's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000012459	CHD9	97	59.799	ENSCPBG00000021517	CHD7	95	73.086
ENSCPBG00000012459	CHD9	74	65.763	ENSCPBG00000012687	CHD8	76	66.708
ENSCPBG00000012459	CHD9	80	64.990	ENSCPBG00000019382	CHD6	83	62.120

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000012459	CHD9	99	91.835	ENSG00000177200	CHD9	100	98.113	Homo_sapiens
ENSCPBG00000012459	CHD9	84	81.091	ENSAPOG00000023034	chd9	90	82.774	Acanthochromis_polyacanthus
ENSCPBG00000012459	CHD9	99	92.052	ENSAMEG00000016232	CHD9	99	85.571	Ailuropoda_melanoleuca
ENSCPBG00000012459	CHD9	84	78.622	ENSACIG00000004097	chd9	89	80.769	Amphilophus_citrinellus
ENSCPBG00000012459	CHD9	84	80.084	ENSAOCG00000005487	chd9	90	82.748	Amphiprion_ocellaris
ENSCPBG00000012459	CHD9	84	81.405	ENSAPEG00000009859	chd9	90	83.296	Amphiprion_percula
ENSCPBG00000012459	CHD9	84	80.602	ENSATEG00000002748	chd9	89	84.091	Anabas_testudineus
ENSCPBG00000012459	CHD9	99	95.300	ENSAPLG00000002826	CHD9	92	95.300	Anas_platyrhynchos
ENSCPBG00000012459	CHD9	99	91.685	ENSACAG00000016150	CHD9	98	85.367	Anolis_carolinensis
ENSCPBG00000012459	CHD9	99	91.474	ENSANAG00000015630	CHD9	98	86.813	Aotus_nancymaae
ENSCPBG00000012459	CHD9	85	78.761	ENSACLG00000016899	chd9	89	83.333	Astatotilapia_calliptera
ENSCPBG00000012459	CHD9	85	79.614	ENSAMXG00000005652	chd9	94	76.710	Astyanax_mexicanus
ENSCPBG00000012459	CHD9	99	90.000	ENSBTAG00000002287	CHD9	99	85.109	Bos_taurus
ENSCPBG00000012459	CHD9	99	91.474	ENSCJAG00000001573	CHD9	98	87.179	Callithrix_jacchus
ENSCPBG00000012459	CHD9	99	91.980	ENSCAFG00000009699	CHD9	99	85.744	Canis_familiaris
ENSCPBG00000012459	CHD9	99	91.980	ENSCAFG00020002879	CHD9	98	88.278	Canis_lupus_dingo
ENSCPBG00000012459	CHD9	99	90.512	ENSCHIG00000021000	CHD9	99	81.480	Capra_hircus
ENSCPBG00000012459	CHD9	99	91.878	ENSTSYG00000007693	CHD9	96	91.878	Carlito_syrichta
ENSCPBG00000012459	CHD9	92	87.029	ENSCAPG00000011604	CHD9	84	87.029	Cavia_aperea
ENSCPBG00000012459	CHD9	99	85.766	ENSCPOG00000036544	CHD9	99	81.783	Cavia_porcellus
ENSCPBG00000012459	CHD9	99	91.402	ENSCCAG00000036178	CHD9	98	86.813	Cebus_capucinus
ENSCPBG00000012459	CHD9	99	91.618	ENSCATG00000036753	CHD9	98	86.813	Cercocebus_atys
ENSCPBG00000012459	CHD9	99	91.908	ENSCLAG00000007137	CHD9	99	92.405	Chinchilla_lanigera
ENSCPBG00000012459	CHD9	99	91.546	ENSCSAG00000005311	CHD9	99	85.402	Chlorocebus_sabaeus
ENSCPBG00000012459	CHD9	73	94.231	ENSCHOG00000003935	CHD9	76	94.231	Choloepus_hoffmanni
ENSCPBG00000012459	CHD9	99	91.618	ENSCANG00000030349	CHD9	98	86.813	Colobus_angolensis_palliatus
ENSCPBG00000012459	CHD9	99	90.968	ENSCGRG00001016150	Chd9	92	90.968	Cricetulus_griseus_chok1gshd
ENSCPBG00000012459	CHD9	99	90.968	ENSCGRG00000012850	Chd9	99	91.484	Cricetulus_griseus_crigri
ENSCPBG00000012459	CHD9	83	78.134	ENSCSEG00000009209	chd9	88	80.772	Cynoglossus_semilaevis
ENSCPBG00000012459	CHD9	85	80.170	ENSCVAG00000016195	chd9	82	81.691	Cyprinodon_variegatus
ENSCPBG00000012459	CHD9	81	77.431	ENSDARG00000074498	chd9	87	80.311	Danio_rerio
ENSCPBG00000012459	CHD9	83	89.300	ENSDNOG00000006045	CHD9	99	88.208	Dasypus_novemcinctus
ENSCPBG00000012459	CHD9	74	91.221	ENSDORG00000008523	-	99	86.072	Dipodomys_ordii
ENSCPBG00000012459	CHD9	93	92.614	ENSETEG00000009565	CHD9	92	92.614	Echinops_telfairi
ENSCPBG00000012459	CHD9	99	91.980	ENSEASG00005014832	CHD9	99	92.213	Equus_asinus_asinus
ENSCPBG00000012459	CHD9	99	91.908	ENSECAG00000011505	CHD9	99	85.154	Equus_caballus
ENSCPBG00000012459	CHD9	84	93.370	ENSEEUG00000014515	CHD9	86	93.370	Erinaceus_europaeus
ENSCPBG00000012459	CHD9	79	80.333	ENSELUG00000006031	chd9	85	80.156	Esox_lucius
ENSCPBG00000012459	CHD9	99	92.269	ENSFCAG00000022534	CHD9	98	88.645	Felis_catus
ENSCPBG00000012459	CHD9	82	94.794	ENSFALG00000013276	CHD9	99	92.860	Ficedula_albicollis
ENSCPBG00000012459	CHD9	98	91.618	ENSFDAG00000021037	CHD9	99	84.802	Fukomys_damarensis
ENSCPBG00000012459	CHD9	84	78.566	ENSFHEG00000006068	chd9	90	82.191	Fundulus_heteroclitus
ENSCPBG00000012459	CHD9	72	76.809	ENSGMOG00000006040	chd9	83	77.341	Gadus_morhua
ENSCPBG00000012459	CHD9	99	90.239	ENSGALG00000039178	CHD9	99	92.143	Gallus_gallus
ENSCPBG00000012459	CHD9	83	79.529	ENSGAFG00000010014	chd9	90	82.027	Gambusia_affinis
ENSCPBG00000012459	CHD9	78	81.791	ENSGACG00000016694	chd9	88	81.852	Gasterosteus_aculeatus
ENSCPBG00000012459	CHD9	99	91.618	ENSGGOG00000014816	CHD9	98	87.179	Gorilla_gorilla
ENSCPBG00000012459	CHD9	85	78.951	ENSHBUG00000023322	chd9	90	83.483	Haplochromis_burtoni
ENSCPBG00000012459	CHD9	99	91.908	ENSHGLG00000014938	CHD9	99	92.405	Heterocephalus_glaber_female
ENSCPBG00000012459	CHD9	88	76.560	ENSHCOG00000000937	chd9	88	80.311	Hippocampus_comes
ENSCPBG00000012459	CHD9	81	80.169	ENSIPUG00000016448	chd9	91	79.349	Ictalurus_punctatus
ENSCPBG00000012459	CHD9	99	91.546	ENSSTOG00000022273	CHD9	99	92.520	Ictidomys_tridecemlineatus
ENSCPBG00000012459	CHD9	74	91.722	ENSJJAG00000015741	-	99	86.044	Jaculus_jaculus
ENSCPBG00000012459	CHD9	81	82.524	ENSKMAG00000016784	chd9	87	82.524	Kryptolebias_marmoratus
ENSCPBG00000012459	CHD9	82	80.394	ENSLBEG00000012077	chd9	87	81.777	Labrus_bergylta
ENSCPBG00000012459	CHD9	99	82.107	ENSLACG00000005557	CHD9	92	82.107	Latimeria_chalumnae
ENSCPBG00000012459	CHD9	88	82.814	ENSLOCG00000007225	chd9	89	83.896	Lepisosteus_oculatus
ENSCPBG00000012459	CHD9	99	91.618	ENSLAFG00000015374	CHD9	99	84.882	Loxodonta_africana
ENSCPBG00000012459	CHD9	99	91.546	ENSMFAG00000041354	CHD9	97	87.935	Macaca_fascicularis
ENSCPBG00000012459	CHD9	99	91.546	ENSMMUG00000016310	CHD9	98	86.813	Macaca_mulatta
ENSCPBG00000012459	CHD9	99	91.679	ENSMNEG00000031494	CHD9	100	85.862	Macaca_nemestrina
ENSCPBG00000012459	CHD9	99	91.618	ENSMLEG00000043219	CHD9	98	86.813	Mandrillus_leucophaeus
ENSCPBG00000012459	CHD9	93	78.557	ENSMAMG00000003909	chd9	90	82.366	Mastacembelus_armatus
ENSCPBG00000012459	CHD9	85	78.707	ENSMZEG00005006581	chd9	94	83.060	Maylandia_zebra
ENSCPBG00000012459	CHD9	99	86.354	ENSMGAG00000004642	CHD9	94	84.553	Meleagris_gallopavo
ENSCPBG00000012459	CHD9	99	91.763	ENSMICG00000016679	CHD9	98	87.179	Microcebus_murinus
ENSCPBG00000012459	CHD9	84	79.537	ENSMMOG00000016406	chd9	90	82.671	Mola_mola
ENSCPBG00000012459	CHD9	78	85.380	ENSMODG00000013142	-	99	93.469	Monodelphis_domestica
ENSCPBG00000012459	CHD9	84	81.195	ENSMALG00000013306	chd9	89	82.296	Monopterus_albus
ENSCPBG00000012459	CHD9	99	90.679	MGP_CAROLIEiJ_G0031364	Chd9	92	90.679	Mus_caroli
ENSCPBG00000012459	CHD9	99	90.390	ENSMUSG00000056608	Chd9	99	90.449	Mus_musculus
ENSCPBG00000012459	CHD9	99	90.751	MGP_PahariEiJ_G0022964	Chd9	91	90.751	Mus_pahari
ENSCPBG00000012459	CHD9	99	90.318	MGP_SPRETEiJ_G0032483	Chd9	92	90.318	Mus_spretus
ENSCPBG00000012459	CHD9	99	92.197	ENSMPUG00000003285	CHD9	99	85.958	Mustela_putorius_furo
ENSCPBG00000012459	CHD9	99	91.474	ENSMLUG00000004456	CHD9	99	84.663	Myotis_lucifugus
ENSCPBG00000012459	CHD9	86	78.514	ENSNBRG00000009423	chd9	94	83.134	Neolamprologus_brichardi
ENSCPBG00000012459	CHD9	99	84.376	ENSNLEG00000001026	CHD9	100	86.217	Nomascus_leucogenys
ENSCPBG00000012459	CHD9	81	99.346	ENSMEUG00000008222	-	84	99.346	Notamacropus_eugenii
ENSCPBG00000012459	CHD9	86	95.143	ENSOPRG00000011168	CHD9	84	95.143	Ochotona_princeps
ENSCPBG00000012459	CHD9	99	91.625	ENSODEG00000004466	CHD9	92	91.625	Octodon_degus
ENSCPBG00000012459	CHD9	81	77.852	ENSONIG00000002816	chd9	88	83.196	Oreochromis_niloticus
ENSCPBG00000012459	CHD9	99	94.003	ENSOANG00000013401	CHD9	99	87.786	Ornithorhynchus_anatinus
ENSCPBG00000012459	CHD9	82	91.763	ENSOCUG00000001016	CHD9	98	88.375	Oryctolagus_cuniculus
ENSCPBG00000012459	CHD9	84	79.330	ENSORLG00000013810	chd9	87	81.981	Oryzias_latipes
ENSCPBG00000012459	CHD9	93	80.696	ENSORLG00020020665	chd9	89	83.019	Oryzias_latipes_hni
ENSCPBG00000012459	CHD9	85	79.066	ENSORLG00015019126	chd9	93	76.610	Oryzias_latipes_hsok
ENSCPBG00000012459	CHD9	70	76.980	ENSOMEG00000015978	chd9	92	82.286	Oryzias_melastigma
ENSCPBG00000012459	CHD9	99	91.835	ENSOGAG00000002110	CHD9	92	91.835	Otolemur_garnettii
ENSCPBG00000012459	CHD9	99	89.814	ENSOARG00000017664	CHD9	99	84.917	Ovis_aries
ENSCPBG00000012459	CHD9	81	91.763	ENSPPAG00000039388	-	95	91.763	Pan_paniscus
ENSCPBG00000012459	CHD9	99	92.197	ENSPPRG00000004801	CHD9	98	88.278	Panthera_pardus
ENSCPBG00000012459	CHD9	99	89.957	ENSPTIG00000021854	CHD9	99	84.386	Panthera_tigris_altaica
ENSCPBG00000012459	CHD9	99	91.763	ENSPTRG00000008113	CHD9	98	87.179	Pan_troglodytes
ENSCPBG00000012459	CHD9	99	91.546	ENSPANG00000019307	CHD9	99	88.421	Papio_anubis
ENSCPBG00000012459	CHD9	95	77.344	ENSPKIG00000025401	-	95	77.722	Paramormyrops_kingsleyae
ENSCPBG00000012459	CHD9	95	82.258	ENSPKIG00000021876	chd9	89	83.772	Paramormyrops_kingsleyae
ENSCPBG00000012459	CHD9	76	91.703	ENSPSIG00000008099	CHD9	99	94.957	Pelodiscus_sinensis
ENSCPBG00000012459	CHD9	59	70.721	ENSPMAG00000006035	-	94	65.934	Petromyzon_marinus
ENSCPBG00000012459	CHD9	99	87.002	ENSPCIG00000017215	CHD9	97	89.565	Phascolarctos_cinereus
ENSCPBG00000012459	CHD9	86	76.913	ENSPFOG00000015839	chd9	90	81.953	Poecilia_formosa
ENSCPBG00000012459	CHD9	86	76.980	ENSPLAG00000011118	chd9	90	82.027	Poecilia_latipinna
ENSCPBG00000012459	CHD9	83	80.403	ENSPMEG00000015106	chd9	90	82.823	Poecilia_mexicana
ENSCPBG00000012459	CHD9	84	79.126	ENSPREG00000006473	chd9	90	81.939	Poecilia_reticulata
ENSCPBG00000012459	CHD9	99	91.835	ENSPPYG00000007348	CHD9	99	85.566	Pongo_abelii
ENSCPBG00000012459	CHD9	85	89.798	ENSPCAG00000007564	CHD9	86	92.844	Procavia_capensis
ENSCPBG00000012459	CHD9	99	88.873	ENSPCOG00000028433	CHD9	98	87.912	Propithecus_coquereli
ENSCPBG00000012459	CHD9	96	87.149	ENSPVAG00000015617	CHD9	97	82.421	Pteropus_vampyrus
ENSCPBG00000012459	CHD9	85	78.707	ENSPNYG00000010947	chd9	94	83.060	Pundamilia_nyererei
ENSCPBG00000012459	CHD9	90	80.666	ENSPNAG00000024141	chd9	93	84.198	Pygocentrus_nattereri
ENSCPBG00000012459	CHD9	99	78.715	ENSRNOG00000049302	Chd9	92	94.379	Rattus_norvegicus
ENSCPBG00000012459	CHD9	82	91.474	ENSRBIG00000035553	CHD9	99	88.407	Rhinopithecus_bieti
ENSCPBG00000012459	CHD9	81	91.546	ENSRROG00000033278	CHD9	99	88.126	Rhinopithecus_roxellana
ENSCPBG00000012459	CHD9	99	91.618	ENSSBOG00000030240	CHD9	98	87.179	Saimiri_boliviensis_boliviensis
ENSCPBG00000012459	CHD9	99	93.001	ENSSHAG00000002719	CHD9	99	87.036	Sarcophilus_harrisii
ENSCPBG00000012459	CHD9	84	80.145	ENSSFOG00015001327	chd9	91	80.000	Scleropages_formosus
ENSCPBG00000012459	CHD9	96	82.362	ENSSFOG00015020209	chd9	90	84.389	Scleropages_formosus
ENSCPBG00000012459	CHD9	83	79.161	ENSSMAG00000008953	chd9	93	81.501	Scophthalmus_maximus
ENSCPBG00000012459	CHD9	84	79.190	ENSSDUG00000006139	chd9	87	82.282	Seriola_dumerili
ENSCPBG00000012459	CHD9	96	80.275	ENSSLDG00000017818	chd9	90	82.406	Seriola_lalandi_dorsalis
ENSCPBG00000012459	CHD9	96	92.453	ENSSARG00000010632	CHD9	96	86.295	Sorex_araneus
ENSCPBG00000012459	CHD9	84	79.749	ENSSPAG00000021649	chd9	90	82.388	Stegastes_partitus
ENSCPBG00000012459	CHD9	99	90.870	ENSSSCG00000033591	CHD9	95	84.449	Sus_scrofa
ENSCPBG00000012459	CHD9	99	90.292	ENSTGUG00000007476	CHD9	100	92.449	Taeniopygia_guttata
ENSCPBG00000012459	CHD9	86	79.181	ENSTRUG00000009125	chd9	89	81.777	Takifugu_rubripes
ENSCPBG00000012459	CHD9	60	83.902	ENSTNIG00000003825	chd9	87	83.902	Tetraodon_nigroviridis
ENSCPBG00000012459	CHD9	69	88.000	ENSTBEG00000016052	-	81	83.333	Tupaia_belangeri
ENSCPBG00000012459	CHD9	99	85.010	ENSTTRG00000012674	CHD9	90	85.222	Tursiops_truncatus
ENSCPBG00000012459	CHD9	68	89.469	ENSUAMG00000022706	CHD9	98	88.278	Ursus_americanus
ENSCPBG00000012459	CHD9	99	82.356	ENSUMAG00000004043	CHD9	97	95.802	Ursus_maritimus
ENSCPBG00000012459	CHD9	96	89.694	ENSVPAG00000001374	CHD9	97	86.820	Vicugna_pacos
ENSCPBG00000012459	CHD9	99	91.980	ENSVVUG00000019435	CHD9	99	85.675	Vulpes_vulpes
ENSCPBG00000012459	CHD9	99	86.143	ENSXETG00000000349	chd9	92	86.143	Xenopus_tropicalis
ENSCPBG00000012459	CHD9	76	81.865	ENSXCOG00000012997	chd9	87	82.379	Xiphophorus_couchianus
ENSCPBG00000012459	CHD9	86	77.047	ENSXMAG00000016192	chd9	90	82.027	Xiphophorus_maculatus