EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPBG00000012618 (Gene tree)
Gene ID: 101930890
Gene Symbol: SARNP
Alias: CIP29|Hcc-1|THO1
Full Name: SAP domain containing ribonucleoprotein
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Minus strand
Length: 55655 bases
Position: chrKK083195.1:17717-73371
Accession: 24432
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000017174	SAP	PF02037.27	4.8e-12	1	1
ENSCPBP00000017171	SAP	PF02037.27	5e-12	1	1
ENSCPBP00000017172	SAP	PF02037.27	7.1e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000020324	SARNP-201	734	-	ENSCPBP00000017171	211 (aa)	-	-
ENSCPBT00000020325	SARNP-202	3250	-	ENSCPBP00000017172	242 (aa)	-	-
ENSCPBT00000020327	SARNP-203	3154	XM_005311060	ENSCPBP00000017174	210 (aa)	XP_005311117	UPI000388EBB6

Gene Model

Click here to download ENSCPBG00000012618's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000012618's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000012618	SARNP	99	87.081	ENSG00000205323	SARNP	99	87.081	Homo_sapiens
ENSCPBG00000012618	SARNP	94	55.924	ENSAPOG00000005247	sarnp	82	54.902	Acanthochromis_polyacanthus
ENSCPBG00000012618	SARNP	99	87.560	ENSAMEG00000011769	SARNP	99	87.560	Ailuropoda_melanoleuca
ENSCPBG00000012618	SARNP	99	59.276	ENSAPEG00000016710	sarnp	99	58.605	Amphiprion_percula
ENSCPBG00000012618	SARNP	99	60.748	ENSATEG00000024594	sarnp	99	58.491	Anabas_testudineus
ENSCPBG00000012618	SARNP	99	88.038	ENSACAG00000015446	SARNP	98	88.038	Anolis_carolinensis
ENSCPBG00000012618	SARNP	99	74.641	ENSANAG00000025021	-	99	77.033	Aotus_nancymaae
ENSCPBG00000012618	SARNP	99	86.124	ENSANAG00000027405	-	99	86.124	Aotus_nancymaae
ENSCPBG00000012618	SARNP	99	55.157	ENSACLG00000016479	sarnp	99	55.450	Astatotilapia_calliptera
ENSCPBG00000012618	SARNP	99	59.009	ENSAMXG00000004834	sarnp	99	61.321	Astyanax_mexicanus
ENSCPBG00000012618	SARNP	95	72.637	ENSBTAG00000032446	-	94	72.637	Bos_taurus
ENSCPBG00000012618	SARNP	99	87.081	ENSBTAG00000020662	SARNP	99	87.081	Bos_taurus
ENSCPBG00000012618	SARNP	99	86.124	ENSCJAG00000007853	-	99	86.124	Callithrix_jacchus
ENSCPBG00000012618	SARNP	95	86.432	ENSCAFG00000023714	SARNP	95	86.432	Canis_familiaris
ENSCPBG00000012618	SARNP	99	76.415	ENSCAFG00020026107	SARNP	99	76.415	Canis_lupus_dingo
ENSCPBG00000012618	SARNP	99	69.712	ENSCHIG00000017443	-	99	72.115	Capra_hircus
ENSCPBG00000012618	SARNP	98	79.126	ENSCHIG00000013335	-	98	79.126	Capra_hircus
ENSCPBG00000012618	SARNP	99	88.038	ENSTSYG00000009225	SARNP	99	88.038	Carlito_syrichta
ENSCPBG00000012618	SARNP	99	87.081	ENSCPOG00000011755	-	99	87.081	Cavia_porcellus
ENSCPBG00000012618	SARNP	99	76.555	ENSCCAG00000004296	-	95	76.098	Cebus_capucinus
ENSCPBG00000012618	SARNP	99	67.464	ENSCCAG00000030892	-	97	67.464	Cebus_capucinus
ENSCPBG00000012618	SARNP	99	87.081	ENSCCAG00000019247	-	99	87.081	Cebus_capucinus
ENSCPBG00000012618	SARNP	99	87.081	ENSCATG00000045088	SARNP	99	87.081	Cercocebus_atys
ENSCPBG00000012618	SARNP	99	77.512	ENSCATG00000042076	-	97	77.512	Cercocebus_atys
ENSCPBG00000012618	SARNP	99	87.560	ENSCLAG00000007774	-	99	87.560	Chinchilla_lanigera
ENSCPBG00000012618	SARNP	99	87.081	ENSCSAG00000005303	SARNP	97	87.081	Chlorocebus_sabaeus
ENSCPBG00000012618	SARNP	94	83.756	ENSCHOG00000005081	SARNP	99	83.756	Choloepus_hoffmanni
ENSCPBG00000012618	SARNP	100	35.808	ENSCING00000015811	-	100	37.872	Ciona_intestinalis
ENSCPBG00000012618	SARNP	99	87.560	ENSCANG00000027918	-	99	87.560	Colobus_angolensis_palliatus
ENSCPBG00000012618	SARNP	99	69.856	ENSCGRG00001013880	-	99	69.856	Cricetulus_griseus_chok1gshd
ENSCPBG00000012618	SARNP	98	63.768	ENSCGRG00001022403	-	78	60.784	Cricetulus_griseus_chok1gshd
ENSCPBG00000012618	SARNP	99	86.603	ENSCGRG00001018129	-	99	86.603	Cricetulus_griseus_chok1gshd
ENSCPBG00000012618	SARNP	99	69.856	ENSCGRG00000000109	-	76	67.157	Cricetulus_griseus_crigri
ENSCPBG00000012618	SARNP	99	69.856	ENSCGRG00000004298	-	99	69.856	Cricetulus_griseus_crigri
ENSCPBG00000012618	SARNP	99	86.603	ENSCGRG00000015182	-	99	86.603	Cricetulus_griseus_crigri
ENSCPBG00000012618	SARNP	99	59.817	ENSCVAG00000010924	sarnp	99	58.294	Cyprinodon_variegatus
ENSCPBG00000012618	SARNP	99	61.682	ENSDARG00000059357	sarnp	99	61.722	Danio_rerio
ENSCPBG00000012618	SARNP	99	87.560	ENSDNOG00000014518	SARNP	99	87.560	Dasypus_novemcinctus
ENSCPBG00000012618	SARNP	99	87.081	ENSDORG00000001065	-	99	87.081	Dipodomys_ordii
ENSCPBG00000012618	SARNP	100	54.717	ENSEBUG00000016080	sarnp	99	52.381	Eptatretus_burgeri
ENSCPBG00000012618	SARNP	99	87.560	ENSECAG00000000708	SARNP	99	87.560	Equus_caballus
ENSCPBG00000012618	SARNP	98	62.085	ENSELUG00000020983	sarnp	99	58.571	Esox_lucius
ENSCPBG00000012618	SARNP	99	56.696	ENSELUG00000006786	HCC1	99	57.746	Esox_lucius
ENSCPBG00000012618	SARNP	99	86.124	ENSFCAG00000037076	SARNP	99	86.124	Felis_catus
ENSCPBG00000012618	SARNP	90	81.915	ENSFALG00000000679	SARNP	73	82.353	Ficedula_albicollis
ENSCPBG00000012618	SARNP	99	87.560	ENSFDAG00000007766	SARNP	99	87.560	Fukomys_damarensis
ENSCPBG00000012618	SARNP	99	58.904	ENSFHEG00000012192	sarnp	99	57.547	Fundulus_heteroclitus
ENSCPBG00000012618	SARNP	99	54.067	ENSGMOG00000011467	sarnp	99	54.067	Gadus_morhua
ENSCPBG00000012618	SARNP	100	91.905	ENSGALG00000030342	SARNP	100	91.905	Gallus_gallus
ENSCPBG00000012618	SARNP	99	57.991	ENSGAFG00000019183	sarnp	99	56.604	Gambusia_affinis
ENSCPBG00000012618	SARNP	99	57.339	ENSGACG00000011615	sarnp	99	57.820	Gasterosteus_aculeatus
ENSCPBG00000012618	SARNP	99	73.206	ENSGGOG00000041309	-	99	74.163	Gorilla_gorilla
ENSCPBG00000012618	SARNP	99	87.081	ENSGGOG00000013217	SARNP	99	87.081	Gorilla_gorilla
ENSCPBG00000012618	SARNP	99	55.605	ENSHBUG00000008761	sarnp	99	55.924	Haplochromis_burtoni
ENSCPBG00000012618	SARNP	99	87.081	ENSHGLG00000016869	SARNP	99	87.081	Heterocephalus_glaber_female
ENSCPBG00000012618	SARNP	99	87.081	ENSHGLG00100014657	SARNP	99	87.081	Heterocephalus_glaber_male
ENSCPBG00000012618	SARNP	99	56.075	ENSHCOG00000015510	sarnp	99	55.607	Hippocampus_comes
ENSCPBG00000012618	SARNP	99	62.857	ENSIPUG00000012503	Sarnp	99	62.857	Ictalurus_punctatus
ENSCPBG00000012618	SARNP	99	87.560	ENSSTOG00000000283	SARNP	99	87.560	Ictidomys_tridecemlineatus
ENSCPBG00000012618	SARNP	97	73.399	ENSJJAG00000011057	-	90	76.684	Jaculus_jaculus
ENSCPBG00000012618	SARNP	99	84.689	ENSJJAG00000001070	-	99	84.689	Jaculus_jaculus
ENSCPBG00000012618	SARNP	99	57.466	ENSKMAG00000013400	sarnp	99	57.746	Kryptolebias_marmoratus
ENSCPBG00000012618	SARNP	99	57.547	ENSLBEG00000025038	sarnp	99	58.962	Labrus_bergylta
ENSCPBG00000012618	SARNP	95	72.000	ENSLACG00000018719	SARNP	89	74.000	Latimeria_chalumnae
ENSCPBG00000012618	SARNP	85	42.935	ENSLACG00000014810	-	96	40.984	Latimeria_chalumnae
ENSCPBG00000012618	SARNP	99	66.047	ENSLOCG00000003621	sarnp	99	66.667	Lepisosteus_oculatus
ENSCPBG00000012618	SARNP	99	86.603	ENSLAFG00000015053	SARNP	99	86.603	Loxodonta_africana
ENSCPBG00000012618	SARNP	99	87.081	ENSMFAG00000045270	SARNP	99	87.081	Macaca_fascicularis
ENSCPBG00000012618	SARNP	99	79.904	ENSMFAG00000032419	-	97	79.904	Macaca_fascicularis
ENSCPBG00000012618	SARNP	99	80.383	ENSMMUG00000037731	-	99	80.383	Macaca_mulatta
ENSCPBG00000012618	SARNP	99	87.081	ENSMMUG00000006289	-	99	87.081	Macaca_mulatta
ENSCPBG00000012618	SARNP	99	78.846	ENSMNEG00000041520	-	96	79.208	Macaca_nemestrina
ENSCPBG00000012618	SARNP	99	70.335	ENSMNEG00000030688	-	97	67.943	Macaca_nemestrina
ENSCPBG00000012618	SARNP	99	87.081	ENSMNEG00000044633	-	99	87.081	Macaca_nemestrina
ENSCPBG00000012618	SARNP	67	84.286	ENSMLEG00000038545	-	86	84.286	Mandrillus_leucophaeus
ENSCPBG00000012618	SARNP	99	77.033	ENSMLEG00000037790	-	97	77.033	Mandrillus_leucophaeus
ENSCPBG00000012618	SARNP	99	57.009	ENSMAMG00000005942	sarnp	99	57.209	Mastacembelus_armatus
ENSCPBG00000012618	SARNP	99	55.605	ENSMZEG00005023533	sarnp	99	55.924	Maylandia_zebra
ENSCPBG00000012618	SARNP	100	91.905	ENSMGAG00000001807	SARNP	100	91.905	Meleagris_gallopavo
ENSCPBG00000012618	SARNP	99	87.081	ENSMAUG00000005256	-	99	87.081	Mesocricetus_auratus
ENSCPBG00000012618	SARNP	99	86.603	ENSMICG00000010902	-	99	86.603	Microcebus_murinus
ENSCPBG00000012618	SARNP	99	87.081	ENSMOCG00000006502	-	99	87.081	Microtus_ochrogaster
ENSCPBG00000012618	SARNP	99	53.555	ENSMMOG00000013258	sarnp	99	52.885	Mola_mola
ENSCPBG00000012618	SARNP	97	57.416	ENSMALG00000009106	sarnp	90	56.459	Monopterus_albus
ENSCPBG00000012618	SARNP	99	86.124	MGP_CAROLIEiJ_G0015958	-	99	86.124	Mus_caroli
ENSCPBG00000012618	SARNP	99	86.124	ENSMUSG00000078427	Sarnp	99	86.124	Mus_musculus
ENSCPBG00000012618	SARNP	94	86.294	MGP_PahariEiJ_G0031126	-	100	86.294	Mus_pahari
ENSCPBG00000012618	SARNP	99	86.124	MGP_SPRETEiJ_G0016783	-	99	86.124	Mus_spretus
ENSCPBG00000012618	SARNP	99	87.560	ENSMPUG00000000885	SARNP	99	87.560	Mustela_putorius_furo
ENSCPBG00000012618	SARNP	80	80.240	ENSMLUG00000003565	SARNP	100	80.240	Myotis_lucifugus
ENSCPBG00000012618	SARNP	99	87.081	ENSNGAG00000010245	-	99	87.081	Nannospalax_galili
ENSCPBG00000012618	SARNP	87	81.967	ENSNLEG00000017599	-	99	81.967	Nomascus_leucogenys
ENSCPBG00000012618	SARNP	99	81.340	ENSMEUG00000014879	SARNP	87	94.737	Notamacropus_eugenii
ENSCPBG00000012618	SARNP	99	69.378	ENSOPRG00000007733	SARNP	99	69.378	Ochotona_princeps
ENSCPBG00000012618	SARNP	99	87.081	ENSODEG00000004608	-	99	87.081	Octodon_degus
ENSCPBG00000012618	SARNP	99	68.421	ENSODEG00000012047	-	99	70.335	Octodon_degus
ENSCPBG00000012618	SARNP	99	56.054	ENSONIG00000016523	sarnp	99	56.398	Oreochromis_niloticus
ENSCPBG00000012618	SARNP	95	85.644	ENSOANG00000002882	SARNP	99	84.653	Ornithorhynchus_anatinus
ENSCPBG00000012618	SARNP	98	85.437	ENSOCUG00000010117	SARNP	98	86.700	Oryctolagus_cuniculus
ENSCPBG00000012618	SARNP	99	61.137	ENSORLG00000029565	sarnp	89	58.411	Oryzias_latipes
ENSCPBG00000012618	SARNP	99	61.137	ENSORLG00015021649	sarnp	89	58.411	Oryzias_latipes_hsok
ENSCPBG00000012618	SARNP	99	60.664	ENSOMEG00000014699	sarnp	99	60.190	Oryzias_melastigma
ENSCPBG00000012618	SARNP	75	82.803	ENSOGAG00000001693	SARNP	94	82.803	Otolemur_garnettii
ENSCPBG00000012618	SARNP	99	87.081	ENSOARG00000011218	SARNP	99	87.081	Ovis_aries
ENSCPBG00000012618	SARNP	99	87.081	ENSPPAG00000039513	SARNP	99	87.081	Pan_paniscus
ENSCPBG00000012618	SARNP	99	69.378	ENSPPAG00000042587	-	98	70.335	Pan_paniscus
ENSCPBG00000012618	SARNP	99	86.124	ENSPPRG00000020704	SARNP	99	86.124	Panthera_pardus
ENSCPBG00000012618	SARNP	99	87.081	ENSPTRG00000029747	SARNP	99	87.081	Pan_troglodytes
ENSCPBG00000012618	SARNP	99	69.378	ENSPTRG00000046696	-	98	70.335	Pan_troglodytes
ENSCPBG00000012618	SARNP	99	87.081	ENSPANG00000013149	-	99	87.081	Papio_anubis
ENSCPBG00000012618	SARNP	99	78.469	ENSPANG00000006001	-	97	78.469	Papio_anubis
ENSCPBG00000012618	SARNP	99	63.551	ENSPKIG00000002212	sarnp	99	64.319	Paramormyrops_kingsleyae
ENSCPBG00000012618	SARNP	100	92.381	ENSPSIG00000002998	SARNP	98	94.175	Pelodiscus_sinensis
ENSCPBG00000012618	SARNP	99	86.124	ENSPEMG00000000923	-	99	86.124	Peromyscus_maniculatus_bairdii
ENSCPBG00000012618	SARNP	98	52.804	ENSPMAG00000009808	sarnp	94	53.052	Petromyzon_marinus
ENSCPBG00000012618	SARNP	94	89.394	ENSPCIG00000024663	SARNP	98	89.394	Phascolarctos_cinereus
ENSCPBG00000012618	SARNP	99	56.621	ENSPFOG00000013517	sarnp	99	56.338	Poecilia_formosa
ENSCPBG00000012618	SARNP	99	56.881	ENSPLAG00000017096	sarnp	99	57.075	Poecilia_latipinna
ENSCPBG00000012618	SARNP	99	56.881	ENSPMEG00000014306	sarnp	99	57.075	Poecilia_mexicana
ENSCPBG00000012618	SARNP	98	48.058	ENSPREG00000019598	sarnp	79	48.718	Poecilia_reticulata
ENSCPBG00000012618	SARNP	99	87.081	ENSPPYG00000004630	SARNP	99	87.081	Pongo_abelii
ENSCPBG00000012618	SARNP	99	60.465	ENSPNAG00000000975	sarnp	99	60.190	Pygocentrus_nattereri
ENSCPBG00000012618	SARNP	99	86.124	ENSRNOG00000030520	Sarnp	99	86.124	Rattus_norvegicus
ENSCPBG00000012618	SARNP	99	65.550	ENSRBIG00000037388	-	97	63.636	Rhinopithecus_bieti
ENSCPBG00000012618	SARNP	97	83.824	ENSRBIG00000019503	-	99	83.824	Rhinopithecus_bieti
ENSCPBG00000012618	SARNP	99	77.358	ENSRBIG00000026928	-	97	77.830	Rhinopithecus_bieti
ENSCPBG00000012618	SARNP	99	87.560	ENSRBIG00000039295	-	99	87.560	Rhinopithecus_bieti
ENSCPBG00000012618	SARNP	99	87.560	ENSRROG00000035177	-	99	87.560	Rhinopithecus_roxellana
ENSCPBG00000012618	SARNP	99	77.358	ENSRROG00000044575	-	97	77.830	Rhinopithecus_roxellana
ENSCPBG00000012618	SARNP	99	87.081	ENSSBOG00000035337	-	99	87.081	Saimiri_boliviensis_boliviensis
ENSCPBG00000012618	SARNP	99	69.378	ENSSBOG00000022787	-	96	72.105	Saimiri_boliviensis_boliviensis
ENSCPBG00000012618	SARNP	99	84.689	ENSSBOG00000028635	-	98	84.689	Saimiri_boliviensis_boliviensis
ENSCPBG00000012618	SARNP	99	90.431	ENSSHAG00000008865	SARNP	99	90.431	Sarcophilus_harrisii
ENSCPBG00000012618	SARNP	99	63.801	ENSSFOG00015020709	sarnp	99	62.745	Scleropages_formosus
ENSCPBG00000012618	SARNP	98	56.667	ENSSMAG00000018587	sarnp	99	55.238	Scophthalmus_maximus
ENSCPBG00000012618	SARNP	99	59.906	ENSSDUG00000005484	sarnp	99	58.491	Seriola_dumerili
ENSCPBG00000012618	SARNP	99	59.906	ENSSLDG00000003775	sarnp	99	58.491	Seriola_lalandi_dorsalis
ENSCPBG00000012618	SARNP	99	63.158	ENSSARG00000004858	SARNP	99	63.158	Sorex_araneus
ENSCPBG00000012618	SARNP	95	71.921	ENSSPUG00000015135	SARNP	97	71.429	Sphenodon_punctatus
ENSCPBG00000012618	SARNP	99	86.603	ENSSSCG00000000364	SARNP	99	86.603	Sus_scrofa
ENSCPBG00000012618	SARNP	94	79.695	ENSTGUG00000016126	SARNP	100	79.695	Taeniopygia_guttata
ENSCPBG00000012618	SARNP	99	58.216	ENSTRUG00000009497	-	99	59.242	Takifugu_rubripes
ENSCPBG00000012618	SARNP	99	54.167	ENSTNIG00000012432	sarnp	99	54.167	Tetraodon_nigroviridis
ENSCPBG00000012618	SARNP	99	80.383	ENSTTRG00000009735	SARNP	99	80.383	Tursiops_truncatus
ENSCPBG00000012618	SARNP	79	79.518	ENSUAMG00000015093	-	86	79.518	Ursus_americanus
ENSCPBG00000012618	SARNP	94	87.310	ENSVPAG00000009515	SARNP	100	87.310	Vicugna_pacos
ENSCPBG00000012618	SARNP	99	87.560	ENSVVUG00000022779	SARNP	99	87.560	Vulpes_vulpes
ENSCPBG00000012618	SARNP	99	77.885	ENSXETG00000024657	sarnp	99	77.885	Xenopus_tropicalis
ENSCPBG00000012618	SARNP	99	58.904	ENSXMAG00000009356	sarnp	99	57.547	Xiphophorus_maculatus