EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000012712 (Gene tree)
Gene ID: 101934577
Gene Symbol: RAB5B
Alias: -
Full Name: RAB5B%2C member RAS oncogene family
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Plus strand
Length: 16964 bases
Position: chrKK083195.1:186247-203210
Accession: 9784
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000017352	MMR_HSR1	PF01926.23	0.00019	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000020516	RAB5B-201	1929	-	ENSCPBP00000017352	215 (aa)	XP_005311133	UPI000388AF13

Gene Model

Click here to download ENSCPBG00000012712's gene model file

Pathways

Pathway ID	Pathway Name	Source
cpic04144	Endocytosis	KEGG
cpic04145	Phagosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000012712's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000012712	RAB5B	89	32.057	ENSCPBG00000002289	RAB36	67	32.057
ENSCPBG00000012712	RAB5B	78	31.765	ENSCPBG00000028244	RERG	84	31.765
ENSCPBG00000012712	RAB5B	90	39.899	ENSCPBG00000015839	-	93	39.899
ENSCPBG00000012712	RAB5B	75	43.827	ENSCPBG00000011914	RAB19	75	43.827
ENSCPBG00000012712	RAB5B	80	32.759	ENSCPBG00000009289	-	88	32.335
ENSCPBG00000012712	RAB5B	71	35.065	ENSCPBG00000018286	RHEB	83	35.065
ENSCPBG00000012712	RAB5B	90	48.469	ENSCPBG00000023927	RAB22A	98	48.469
ENSCPBG00000012712	RAB5B	86	39.674	ENSCPBG00000012691	RAB2B	86	39.674
ENSCPBG00000012712	RAB5B	90	42.784	ENSCPBG00000022446	RAB1B	93	42.784
ENSCPBG00000012712	RAB5B	78	35.882	ENSCPBG00000001057	RAB39B	80	35.882
ENSCPBG00000012712	RAB5B	80	36.047	ENSCPBG00000016907	RAB15	81	36.047
ENSCPBG00000012712	RAB5B	77	45.783	ENSCPBG00000021406	RAB6B	81	45.783
ENSCPBG00000012712	RAB5B	79	43.195	ENSCPBG00000006855	RAB30	83	43.195
ENSCPBG00000012712	RAB5B	81	31.429	ENSCPBG00000015094	-	92	31.792
ENSCPBG00000012712	RAB5B	90	37.949	ENSCPBG00000012631	RAB35	83	39.286
ENSCPBG00000012712	RAB5B	82	32.240	ENSCPBG00000013941	-	96	32.240
ENSCPBG00000012712	RAB5B	88	34.031	ENSCPBG00000011245	RAB42	85	34.054
ENSCPBG00000012712	RAB5B	62	30.986	ENSCPBG00000014937	ARL8B	73	30.986
ENSCPBG00000012712	RAB5B	73	34.810	ENSCPBG00000022640	RAB23	71	36.095
ENSCPBG00000012712	RAB5B	62	30.282	ENSCPBG00000010155	ARL8A	73	30.282
ENSCPBG00000012712	RAB5B	90	43.299	ENSCPBG00000013243	RAB1A	95	43.299
ENSCPBG00000012712	RAB5B	89	30.583	ENSCPBG00000020275	RAB34	79	30.583
ENSCPBG00000012712	RAB5B	90	40.594	ENSCPBG00000025817	RAB25	93	40.594
ENSCPBG00000012712	RAB5B	90	42.079	ENSCPBG00000025819	-	99	42.079
ENSCPBG00000012712	RAB5B	75	33.129	ENSCPBG00000016544	NRAS	85	33.129
ENSCPBG00000012712	RAB5B	86	39.791	ENSCPBG00000027605	RAB33B	83	39.791
ENSCPBG00000012712	RAB5B	91	42.308	ENSCPBG00000017056	-	94	42.308
ENSCPBG00000012712	RAB5B	82	42.938	ENSCPBG00000014340	RAB41	84	42.938
ENSCPBG00000012712	RAB5B	78	42.442	ENSCPBG00000014343	RAB7A	83	42.442
ENSCPBG00000012712	RAB5B	90	30.508	ENSCPBG00000005866	RAB20	98	30.508
ENSCPBG00000012712	RAB5B	86	39.130	ENSCPBG00000023254	RAB2A	76	43.478
ENSCPBG00000012712	RAB5B	79	30.000	ENSCPBG00000022721	RRAS2	83	30.000
ENSCPBG00000012712	RAB5B	91	43.137	ENSCPBG00000014614	RAB11A	94	43.137
ENSCPBG00000012712	RAB5B	77	45.181	ENSCPBG00000000041	RAB6A	80	45.181
ENSCPBG00000012712	RAB5B	79	34.911	ENSCPBG00000011715	-	73	34.911
ENSCPBG00000012712	RAB5B	72	40.764	ENSCPBG00000011236	-	73	40.764
ENSCPBG00000012712	RAB5B	89	41.327	ENSCPBG00000027619	-	94	41.327
ENSCPBG00000012712	RAB5B	90	35.323	ENSCPBG00000001542	RAB9B	97	35.323
ENSCPBG00000012712	RAB5B	93	34.466	ENSCPBG00000016033	RAB9A	93	34.466
ENSCPBG00000012712	RAB5B	75	39.157	ENSCPBG00000012042	RAB33A	66	39.157
ENSCPBG00000012712	RAB5B	52	33.929	ENSCPBG00000018802	-	85	35.200
ENSCPBG00000012712	RAB5B	100	83.256	ENSCPBG00000022559	RAB5A	100	83.256
ENSCPBG00000012712	RAB5B	75	44.720	ENSCPBG00000009941	RAB14	75	44.720
ENSCPBG00000012712	RAB5B	81	36.517	ENSCPBG00000028375	RAB12	73	37.640

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000012712	RAB5B	100	96.279	ENSG00000111540	RAB5B	100	97.391	Homo_sapiens
ENSCPBG00000012712	RAB5B	100	94.931	ENSAMEG00000003196	RAB5B	100	94.931	Ailuropoda_melanoleuca
ENSCPBG00000012712	RAB5B	100	98.140	ENSACAG00000005380	RAB5B	100	98.140	Anolis_carolinensis
ENSCPBG00000012712	RAB5B	100	96.279	ENSANAG00000033215	RAB5B	95	96.279	Aotus_nancymaae
ENSCPBG00000012712	RAB5B	100	96.279	ENSBTAG00000014129	RAB5B	100	96.279	Bos_taurus
ENSCPBG00000012712	RAB5B	100	96.279	ENSCJAG00000041780	RAB5B	95	96.279	Callithrix_jacchus
ENSCPBG00000012712	RAB5B	100	96.279	ENSCAFG00000000087	RAB5B	100	96.279	Canis_familiaris
ENSCPBG00000012712	RAB5B	100	96.279	ENSCAFG00020026094	RAB5B	100	96.279	Canis_lupus_dingo
ENSCPBG00000012712	RAB5B	98	96.209	ENSCHIG00000010333	RAB5B	98	96.209	Capra_hircus
ENSCPBG00000012712	RAB5B	100	96.744	ENSTSYG00000009576	RAB5B	100	96.744	Carlito_syrichta
ENSCPBG00000012712	RAB5B	100	96.279	ENSCPOG00000034818	RAB5B	100	96.279	Cavia_porcellus
ENSCPBG00000012712	RAB5B	100	95.349	ENSCCAG00000019480	RAB5B	100	95.349	Cebus_capucinus
ENSCPBG00000012712	RAB5B	83	97.765	ENSCATG00000034978	RAB5B	98	97.765	Cercocebus_atys
ENSCPBG00000012712	RAB5B	100	95.814	ENSCSAG00000005277	RAB5B	100	95.814	Chlorocebus_sabaeus
ENSCPBG00000012712	RAB5B	100	96.744	ENSCGRG00001000428	Rab5b	100	96.744	Cricetulus_griseus_chok1gshd
ENSCPBG00000012712	RAB5B	100	96.744	ENSCGRG00000009508	-	100	96.744	Cricetulus_griseus_crigri
ENSCPBG00000012712	RAB5B	100	96.279	ENSDORG00000025063	Rab5b	100	96.279	Dipodomys_ordii
ENSCPBG00000012712	RAB5B	100	96.279	ENSECAG00000023306	RAB5B	100	96.279	Equus_caballus
ENSCPBG00000012712	RAB5B	100	95.349	ENSEEUG00000006745	RAB5B	100	95.349	Erinaceus_europaeus
ENSCPBG00000012712	RAB5B	100	96.279	ENSFDAG00000008326	RAB5B	100	96.279	Fukomys_damarensis
ENSCPBG00000012712	RAB5B	100	96.279	ENSHGLG00000005995	RAB5B	100	96.279	Heterocephalus_glaber_female
ENSCPBG00000012712	RAB5B	100	96.279	ENSHGLG00100012955	RAB5B	100	96.279	Heterocephalus_glaber_male
ENSCPBG00000012712	RAB5B	100	95.349	ENSSTOG00000010536	RAB5B	100	95.349	Ictidomys_tridecemlineatus
ENSCPBG00000012712	RAB5B	100	96.279	ENSJJAG00000019506	Rab5b	100	96.279	Jaculus_jaculus
ENSCPBG00000012712	RAB5B	100	95.392	ENSLAFG00000018009	RAB5B	95	95.392	Loxodonta_africana
ENSCPBG00000012712	RAB5B	100	95.814	ENSMFAG00000029992	RAB5B	100	95.814	Macaca_fascicularis
ENSCPBG00000012712	RAB5B	100	95.814	ENSMMUG00000031853	RAB5B	100	95.814	Macaca_mulatta
ENSCPBG00000012712	RAB5B	100	95.814	ENSMNEG00000005338	RAB5B	100	95.814	Macaca_nemestrina
ENSCPBG00000012712	RAB5B	100	95.814	ENSMLEG00000034462	RAB5B	100	95.814	Mandrillus_leucophaeus
ENSCPBG00000012712	RAB5B	100	96.279	ENSMAUG00000011613	Rab5b	100	96.279	Mesocricetus_auratus
ENSCPBG00000012712	RAB5B	100	95.814	ENSMICG00000011086	RAB5B	100	95.814	Microcebus_murinus
ENSCPBG00000012712	RAB5B	100	96.279	ENSMUSG00000000711	Rab5b	100	96.279	Mus_musculus
ENSCPBG00000012712	RAB5B	100	96.279	MGP_PahariEiJ_G0031135	Rab5b	100	96.279	Mus_pahari
ENSCPBG00000012712	RAB5B	100	95.814	MGP_SPRETEiJ_G0016774	Rab5b	100	95.814	Mus_spretus
ENSCPBG00000012712	RAB5B	99	94.907	ENSMPUG00000000946	RAB5B	89	94.907	Mustela_putorius_furo
ENSCPBG00000012712	RAB5B	100	96.279	ENSNLEG00000017570	-	100	96.279	Nomascus_leucogenys
ENSCPBG00000012712	RAB5B	100	96.279	ENSOPRG00000007883	RAB5B	100	96.279	Ochotona_princeps
ENSCPBG00000012712	RAB5B	100	95.814	ENSODEG00000003860	RAB5B	100	95.814	Octodon_degus
ENSCPBG00000012712	RAB5B	100	96.279	ENSOCUG00000013895	RAB5B	95	96.279	Oryctolagus_cuniculus
ENSCPBG00000012712	RAB5B	100	96.279	ENSOARG00000010651	RAB5B	95	96.279	Ovis_aries
ENSCPBG00000012712	RAB5B	100	96.279	ENSPPAG00000035431	RAB5B	100	96.279	Pan_paniscus
ENSCPBG00000012712	RAB5B	100	96.279	ENSPTRG00000005071	RAB5B	98	96.682	Pan_troglodytes
ENSCPBG00000012712	RAB5B	99	94.860	ENSPANG00000021075	RAB5B	97	94.860	Papio_anubis
ENSCPBG00000012712	RAB5B	100	96.279	ENSPCOG00000016461	RAB5B	100	96.279	Propithecus_coquereli
ENSCPBG00000012712	RAB5B	100	96.279	ENSRNOG00000006130	Rab5b	100	96.279	Rattus_norvegicus
ENSCPBG00000012712	RAB5B	100	95.814	ENSRBIG00000013165	RAB5B	100	95.814	Rhinopithecus_bieti
ENSCPBG00000012712	RAB5B	100	95.814	ENSRROG00000037973	RAB5B	100	95.814	Rhinopithecus_roxellana
ENSCPBG00000012712	RAB5B	100	81.395	ENSSBOG00000035419	RAB5B	100	81.395	Saimiri_boliviensis_boliviensis
ENSCPBG00000012712	RAB5B	100	96.744	ENSSHAG00000007727	RAB5B	100	96.744	Sarcophilus_harrisii
ENSCPBG00000012712	RAB5B	100	96.279	ENSSARG00000006237	RAB5B	100	96.279	Sorex_araneus
ENSCPBG00000012712	RAB5B	100	97.674	ENSSPUG00000014873	RAB5B	100	97.674	Sphenodon_punctatus
ENSCPBG00000012712	RAB5B	100	96.279	ENSTTRG00000015001	RAB5B	100	96.279	Tursiops_truncatus
ENSCPBG00000012712	RAB5B	100	95.814	ENSUAMG00000014651	RAB5B	100	95.814	Ursus_americanus
ENSCPBG00000012712	RAB5B	100	95.814	ENSUMAG00000016263	RAB5B	100	95.814	Ursus_maritimus
ENSCPBG00000012712	RAB5B	68	97.945	ENSVVUG00000022054	RAB5B	81	97.945	Vulpes_vulpes