EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPBG00000012908 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Minus strand
Length: 20332 bases
Position: chrKK088202.1:3140812-3161143
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000017646	zf-C2H2	PF00096.26	1.1e-11	1	2
ENSCPBP00000017646	zf-C2H2	PF00096.26	1.1e-11	2	2
ENSCPBP00000017645	zf-C2H2	PF00096.26	4e-11	1	2
ENSCPBP00000017645	zf-C2H2	PF00096.26	4e-11	2	2
ENSCPBP00000017646	zf-C2H2_jaz	PF12171.8	2.2e-06	1	1
ENSCPBP00000017645	zf-C2H2_jaz	PF12171.8	2.8e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000020849	-	1494	-	ENSCPBP00000017646	497 (aa)	-	-
ENSCPBT00000020848	-	1542	-	ENSCPBP00000017645	513 (aa)	-	-

Gene Model

Click here to download ENSCPBG00000012908's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000012908's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000012908	-	92	42.283	ENSAPOG00000016594	hinfp	99	41.283	Acanthochromis_polyacanthus
ENSCPBG00000012908	-	92	42.398	ENSAOCG00000014008	hinfp	94	42.398	Amphiprion_ocellaris
ENSCPBG00000012908	-	92	42.644	ENSAPEG00000002011	hinfp	94	42.644	Amphiprion_percula
ENSCPBG00000012908	-	80	45.933	ENSACLG00000014969	hinfp	80	47.250	Astatotilapia_calliptera
ENSCPBG00000012908	-	82	44.731	ENSAMXG00000003514	hinfp	86	44.731	Astyanax_mexicanus
ENSCPBG00000012908	-	92	42.161	ENSCVAG00000012763	hinfp	95	42.161	Cyprinodon_variegatus
ENSCPBG00000012908	-	80	53.676	ENSDARG00000037405	zgc:112083	80	53.676	Danio_rerio
ENSCPBG00000012908	-	99	39.484	ENSDARG00000004851	hinfp	99	39.484	Danio_rerio
ENSCPBG00000012908	-	90	36.779	ENSEBUG00000007941	hinfp	97	37.372	Eptatretus_burgeri
ENSCPBG00000012908	-	80	45.694	ENSFHEG00000003465	hinfp	83	45.792	Fundulus_heteroclitus
ENSCPBG00000012908	-	80	44.762	ENSGMOG00000005447	hinfp	99	45.567	Gadus_morhua
ENSCPBG00000012908	-	79	46.898	ENSGAFG00000004250	hinfp	95	43.038	Gambusia_affinis
ENSCPBG00000012908	-	79	44.743	ENSGACG00000020411	hinfp	99	44.743	Gasterosteus_aculeatus
ENSCPBG00000012908	-	99	94.153	ENSGAGG00000009315	-	99	94.153	Gopherus_agassizii
ENSCPBG00000012908	-	83	44.213	ENSGGOG00000008087	HINFP	82	45.517	Gorilla_gorilla
ENSCPBG00000012908	-	80	45.933	ENSHBUG00000023339	hinfp	80	47.368	Haplochromis_burtoni
ENSCPBG00000012908	-	80	44.365	ENSHCOG00000002113	hinfp	83	45.297	Hippocampus_comes
ENSCPBG00000012908	-	99	39.530	ENSIPUG00000008809	hinfp	100	39.530	Ictalurus_punctatus
ENSCPBG00000012908	-	79	46.040	ENSKMAG00000008905	hinfp	81	46.040	Kryptolebias_marmoratus
ENSCPBG00000012908	-	97	44.334	ENSKMAG00000019874	zgc:112083	98	44.334	Kryptolebias_marmoratus
ENSCPBG00000012908	-	80	42.926	ENSLBEG00000024749	hinfp	84	43.951	Labrus_bergylta
ENSCPBG00000012908	-	80	46.455	ENSLOCG00000003801	hinfp	83	46.455	Lepisosteus_oculatus
ENSCPBG00000012908	-	98	47.071	ENSLOCG00000004586	zgc:112083	97	47.071	Lepisosteus_oculatus
ENSCPBG00000012908	-	83	44.213	ENSMFAG00000035740	HINFP	82	44.931	Macaca_fascicularis
ENSCPBG00000012908	-	80	45.933	ENSMZEG00005016624	hinfp	80	47.368	Maylandia_zebra
ENSCPBG00000012908	-	99	38.879	ENSMGAG00000002682	HINFP	100	38.879	Meleagris_gallopavo
ENSCPBG00000012908	-	79	43.921	ENSMMOG00000016620	hinfp	85	43.921	Mola_mola
ENSCPBG00000012908	-	92	42.308	ENSMALG00000017304	hinfp	94	42.308	Monopterus_albus
ENSCPBG00000012908	-	80	45.933	ENSNBRG00000020685	hinfp	80	47.368	Neolamprologus_brichardi
ENSCPBG00000012908	-	83	44.213	ENSNLEG00000007387	HINFP	100	40.000	Nomascus_leucogenys
ENSCPBG00000012908	-	80	45.714	ENSONIG00000005379	hinfp	82	46.552	Oreochromis_niloticus
ENSCPBG00000012908	-	90	41.357	ENSOMEG00000000955	hinfp	93	41.357	Oryzias_melastigma
ENSCPBG00000012908	-	83	44.907	ENSPPAG00000042389	HINFP	82	45.517	Pan_paniscus
ENSCPBG00000012908	-	83	44.213	ENSPTRG00000004372	HINFP	82	45.517	Pan_troglodytes
ENSCPBG00000012908	-	98	48.898	ENSPKIG00000012562	zgc:112083	99	48.898	Paramormyrops_kingsleyae
ENSCPBG00000012908	-	81	44.575	ENSPKIG00000018654	hinfp	81	45.499	Paramormyrops_kingsleyae
ENSCPBG00000012908	-	97	44.024	ENSPMGG00000011183	zgc:112083	98	43.860	Periophthalmus_magnuspinnatus
ENSCPBG00000012908	-	80	46.944	ENSPFOG00000010093	hinfp	95	43.590	Poecilia_formosa
ENSCPBG00000012908	-	80	46.944	ENSPLAG00000015218	hinfp	95	43.590	Poecilia_latipinna
ENSCPBG00000012908	-	80	46.944	ENSPMEG00000008910	hinfp	95	43.683	Poecilia_mexicana
ENSCPBG00000012908	-	79	47.015	ENSPREG00000022954	hinfp	92	43.041	Poecilia_reticulata
ENSCPBG00000012908	-	80	45.933	ENSPNYG00000017332	hinfp	80	47.368	Pundamilia_nyererei
ENSCPBG00000012908	-	80	45.388	ENSPNAG00000012579	hinfp	83	45.388	Pygocentrus_nattereri
ENSCPBG00000012908	-	98	48.898	ENSPNAG00000013245	zgc:112083	99	48.898	Pygocentrus_nattereri
ENSCPBG00000012908	-	98	48.790	ENSSFOG00015002582	zgc:112083	99	48.790	Scleropages_formosus
ENSCPBG00000012908	-	82	45.952	ENSSFOG00015008241	hinfp	81	45.952	Scleropages_formosus
ENSCPBG00000012908	-	94	40.412	ENSSMAG00000014076	hinfp	97	40.825	Scophthalmus_maximus
ENSCPBG00000012908	-	94	40.787	ENSSDUG00000010783	hinfp	97	40.787	Seriola_dumerili
ENSCPBG00000012908	-	94	40.748	ENSSLDG00000018686	hinfp	97	40.748	Seriola_lalandi_dorsalis
ENSCPBG00000012908	-	92	38.511	ENSSPAG00000016177	hinfp	94	38.511	Stegastes_partitus
ENSCPBG00000012908	-	90	40.564	ENSTRUG00000016621	hinfp	99	40.564	Takifugu_rubripes
ENSCPBG00000012908	-	80	44.844	ENSTNIG00000011746	hinfp	99	45.209	Tetraodon_nigroviridis
ENSCPBG00000012908	-	79	46.517	ENSXCOG00000006699	hinfp	95	42.827	Xiphophorus_couchianus
ENSCPBG00000012908	-	79	46.766	ENSXMAG00000005943	hinfp	87	46.043	Xiphophorus_maculatus