EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000012976 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Minus strand
Length: 284174 bases
Position: chrKK083294.1:25897-310070
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000017734	zf-C2H2	PF00096.26	4.1e-109	1	19
ENSCPBP00000017734	zf-C2H2	PF00096.26	4.1e-109	2	19
ENSCPBP00000017734	zf-C2H2	PF00096.26	4.1e-109	3	19
ENSCPBP00000017734	zf-C2H2	PF00096.26	4.1e-109	4	19
ENSCPBP00000017734	zf-C2H2	PF00096.26	4.1e-109	5	19
ENSCPBP00000017734	zf-C2H2	PF00096.26	4.1e-109	6	19
ENSCPBP00000017734	zf-C2H2	PF00096.26	4.1e-109	7	19
ENSCPBP00000017734	zf-C2H2	PF00096.26	4.1e-109	8	19
ENSCPBP00000017734	zf-C2H2	PF00096.26	4.1e-109	9	19
ENSCPBP00000017734	zf-C2H2	PF00096.26	4.1e-109	10	19
ENSCPBP00000017734	zf-C2H2	PF00096.26	4.1e-109	11	19
ENSCPBP00000017734	zf-C2H2	PF00096.26	4.1e-109	12	19
ENSCPBP00000017734	zf-C2H2	PF00096.26	4.1e-109	13	19
ENSCPBP00000017734	zf-C2H2	PF00096.26	4.1e-109	14	19
ENSCPBP00000017734	zf-C2H2	PF00096.26	4.1e-109	15	19
ENSCPBP00000017734	zf-C2H2	PF00096.26	4.1e-109	16	19
ENSCPBP00000017734	zf-C2H2	PF00096.26	4.1e-109	17	19
ENSCPBP00000017734	zf-C2H2	PF00096.26	4.1e-109	18	19
ENSCPBP00000017734	zf-C2H2	PF00096.26	4.1e-109	19	19
ENSCPBP00000017730	zf-C2H2	PF00096.26	4.7e-91	1	14
ENSCPBP00000017730	zf-C2H2	PF00096.26	4.7e-91	2	14
ENSCPBP00000017730	zf-C2H2	PF00096.26	4.7e-91	3	14
ENSCPBP00000017730	zf-C2H2	PF00096.26	4.7e-91	4	14
ENSCPBP00000017730	zf-C2H2	PF00096.26	4.7e-91	5	14
ENSCPBP00000017730	zf-C2H2	PF00096.26	4.7e-91	6	14
ENSCPBP00000017730	zf-C2H2	PF00096.26	4.7e-91	7	14
ENSCPBP00000017730	zf-C2H2	PF00096.26	4.7e-91	8	14
ENSCPBP00000017730	zf-C2H2	PF00096.26	4.7e-91	9	14
ENSCPBP00000017730	zf-C2H2	PF00096.26	4.7e-91	10	14
ENSCPBP00000017730	zf-C2H2	PF00096.26	4.7e-91	11	14
ENSCPBP00000017730	zf-C2H2	PF00096.26	4.7e-91	12	14
ENSCPBP00000017730	zf-C2H2	PF00096.26	4.7e-91	13	14
ENSCPBP00000017730	zf-C2H2	PF00096.26	4.7e-91	14	14
ENSCPBP00000017747	zf-C2H2	PF00096.26	5.3e-65	1	11
ENSCPBP00000017747	zf-C2H2	PF00096.26	5.3e-65	2	11
ENSCPBP00000017747	zf-C2H2	PF00096.26	5.3e-65	3	11
ENSCPBP00000017747	zf-C2H2	PF00096.26	5.3e-65	4	11
ENSCPBP00000017747	zf-C2H2	PF00096.26	5.3e-65	5	11
ENSCPBP00000017747	zf-C2H2	PF00096.26	5.3e-65	6	11
ENSCPBP00000017747	zf-C2H2	PF00096.26	5.3e-65	7	11
ENSCPBP00000017747	zf-C2H2	PF00096.26	5.3e-65	8	11
ENSCPBP00000017747	zf-C2H2	PF00096.26	5.3e-65	9	11
ENSCPBP00000017747	zf-C2H2	PF00096.26	5.3e-65	10	11
ENSCPBP00000017747	zf-C2H2	PF00096.26	5.3e-65	11	11
ENSCPBP00000017743	zf-C2H2	PF00096.26	1.1e-62	1	10
ENSCPBP00000017743	zf-C2H2	PF00096.26	1.1e-62	2	10
ENSCPBP00000017743	zf-C2H2	PF00096.26	1.1e-62	3	10
ENSCPBP00000017743	zf-C2H2	PF00096.26	1.1e-62	4	10
ENSCPBP00000017743	zf-C2H2	PF00096.26	1.1e-62	5	10
ENSCPBP00000017743	zf-C2H2	PF00096.26	1.1e-62	6	10
ENSCPBP00000017743	zf-C2H2	PF00096.26	1.1e-62	7	10
ENSCPBP00000017743	zf-C2H2	PF00096.26	1.1e-62	8	10
ENSCPBP00000017743	zf-C2H2	PF00096.26	1.1e-62	9	10
ENSCPBP00000017743	zf-C2H2	PF00096.26	1.1e-62	10	10
ENSCPBP00000017749	zf-C2H2	PF00096.26	3e-62	1	10
ENSCPBP00000017749	zf-C2H2	PF00096.26	3e-62	2	10
ENSCPBP00000017749	zf-C2H2	PF00096.26	3e-62	3	10
ENSCPBP00000017749	zf-C2H2	PF00096.26	3e-62	4	10
ENSCPBP00000017749	zf-C2H2	PF00096.26	3e-62	5	10
ENSCPBP00000017749	zf-C2H2	PF00096.26	3e-62	6	10
ENSCPBP00000017749	zf-C2H2	PF00096.26	3e-62	7	10
ENSCPBP00000017749	zf-C2H2	PF00096.26	3e-62	8	10
ENSCPBP00000017749	zf-C2H2	PF00096.26	3e-62	9	10
ENSCPBP00000017749	zf-C2H2	PF00096.26	3e-62	10	10
ENSCPBP00000017728	zf-C2H2	PF00096.26	2.3e-61	1	10
ENSCPBP00000017728	zf-C2H2	PF00096.26	2.3e-61	2	10
ENSCPBP00000017728	zf-C2H2	PF00096.26	2.3e-61	3	10
ENSCPBP00000017728	zf-C2H2	PF00096.26	2.3e-61	4	10
ENSCPBP00000017728	zf-C2H2	PF00096.26	2.3e-61	5	10
ENSCPBP00000017728	zf-C2H2	PF00096.26	2.3e-61	6	10
ENSCPBP00000017728	zf-C2H2	PF00096.26	2.3e-61	7	10
ENSCPBP00000017728	zf-C2H2	PF00096.26	2.3e-61	8	10
ENSCPBP00000017728	zf-C2H2	PF00096.26	2.3e-61	9	10
ENSCPBP00000017728	zf-C2H2	PF00096.26	2.3e-61	10	10
ENSCPBP00000017727	zf-C2H2	PF00096.26	5.8e-47	1	8
ENSCPBP00000017727	zf-C2H2	PF00096.26	5.8e-47	2	8
ENSCPBP00000017727	zf-C2H2	PF00096.26	5.8e-47	3	8
ENSCPBP00000017727	zf-C2H2	PF00096.26	5.8e-47	4	8
ENSCPBP00000017727	zf-C2H2	PF00096.26	5.8e-47	5	8
ENSCPBP00000017727	zf-C2H2	PF00096.26	5.8e-47	6	8
ENSCPBP00000017727	zf-C2H2	PF00096.26	5.8e-47	7	8
ENSCPBP00000017727	zf-C2H2	PF00096.26	5.8e-47	8	8
ENSCPBP00000017737	zf-C2H2	PF00096.26	4.3e-43	1	7
ENSCPBP00000017737	zf-C2H2	PF00096.26	4.3e-43	2	7
ENSCPBP00000017737	zf-C2H2	PF00096.26	4.3e-43	3	7
ENSCPBP00000017737	zf-C2H2	PF00096.26	4.3e-43	4	7
ENSCPBP00000017737	zf-C2H2	PF00096.26	4.3e-43	5	7
ENSCPBP00000017737	zf-C2H2	PF00096.26	4.3e-43	6	7
ENSCPBP00000017737	zf-C2H2	PF00096.26	4.3e-43	7	7
ENSCPBP00000017730	zf-met	PF12874.7	1.6e-17	1	1
ENSCPBP00000017734	zf-met	PF12874.7	8.5e-17	1	2
ENSCPBP00000017734	zf-met	PF12874.7	8.5e-17	2	2
ENSCPBP00000017747	zf-met	PF12874.7	8.2e-10	1	1
ENSCPBP00000017737	zf-met	PF12874.7	4.4e-09	1	1
ENSCPBP00000017743	zf-met	PF12874.7	5.3e-07	1	1
ENSCPBP00000017749	zf-met	PF12874.7	1.4e-06	1	1
ENSCPBP00000017727	zf-met	PF12874.7	3.6e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000020955	-	1791	-	ENSCPBP00000017734	596 (aa)	-	-
ENSCPBT00000020951	-	1953	-	ENSCPBP00000017730	650 (aa)	-	-
ENSCPBT00000020948	-	1326	-	ENSCPBP00000017727	441 (aa)	-	-
ENSCPBT00000020949	-	1362	-	ENSCPBP00000017728	453 (aa)	-	-
ENSCPBT00000020958	-	1206	-	ENSCPBP00000017737	401 (aa)	-	-
ENSCPBT00000020979	-	249	-	ENSCPBP00000017756	82 (aa)	-	-
ENSCPBT00000020969	-	1467	-	ENSCPBP00000017747	488 (aa)	-	-
ENSCPBT00000020965	-	1356	-	ENSCPBP00000017743	451 (aa)	-	-
ENSCPBT00000020971	-	1485	-	ENSCPBP00000017749	494 (aa)	-	-

Gene Model

Click here to download ENSCPBG00000012976's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000012976's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000012976	-	95	52.047	ENSCPBG00000001526	-	88	52.632
ENSCPBG00000012976	-	93	42.449	ENSCPBG00000013652	-	76	43.000
ENSCPBG00000012976	-	79	58.333	ENSCPBG00000015987	-	82	57.534
ENSCPBG00000012976	-	98	42.763	ENSCPBG00000023418	-	61	49.735
ENSCPBG00000012976	-	95	44.195	ENSCPBG00000023415	GZF1	55	44.737
ENSCPBG00000012976	-	93	63.636	ENSCPBG00000026433	-	73	65.957
ENSCPBG00000012976	-	93	69.048	ENSCPBG00000001258	-	99	67.213
ENSCPBG00000012976	-	99	71.749	ENSCPBG00000004030	-	88	84.615
ENSCPBG00000012976	-	93	64.017	ENSCPBG00000005703	-	54	65.217
ENSCPBG00000012976	-	97	35.011	ENSCPBG00000024735	PRDM5	90	39.858
ENSCPBG00000012976	-	99	63.636	ENSCPBG00000015500	-	97	82.051
ENSCPBG00000012976	-	94	88.235	ENSCPBG00000003774	-	96	78.378
ENSCPBG00000012976	-	98	65.019	ENSCPBG00000003130	-	97	72.936
ENSCPBG00000012976	-	95	56.701	ENSCPBG00000002063	-	94	52.033
ENSCPBG00000012976	-	99	70.182	ENSCPBG00000001181	-	99	70.000
ENSCPBG00000012976	-	99	65.185	ENSCPBG00000017494	-	95	70.000
ENSCPBG00000012976	-	89	76.923	ENSCPBG00000021487	-	95	76.923
ENSCPBG00000012976	-	99	54.573	ENSCPBG00000009609	-	97	56.410
ENSCPBG00000012976	-	99	69.178	ENSCPBG00000021479	-	99	69.667
ENSCPBG00000012976	-	93	49.328	ENSCPBG00000005586	-	80	53.232
ENSCPBG00000012976	-	94	38.511	ENSCPBG00000026947	ZNF319	99	39.867
ENSCPBG00000012976	-	94	57.118	ENSCPBG00000017489	-	99	63.287
ENSCPBG00000012976	-	91	84.615	ENSCPBG00000004990	-	99	84.615
ENSCPBG00000012976	-	98	59.052	ENSCPBG00000002014	-	70	59.111
ENSCPBG00000012976	-	99	69.070	ENSCPBG00000002430	-	95	87.179
ENSCPBG00000012976	-	95	62.843	ENSCPBG00000001421	-	100	63.178
ENSCPBG00000012976	-	98	66.284	ENSCPBG00000016841	-	95	73.529
ENSCPBG00000012976	-	94	33.764	ENSCPBG00000004542	ZNF865	86	41.379
ENSCPBG00000012976	-	97	46.305	ENSCPBG00000008580	-	100	49.789
ENSCPBG00000012976	-	98	68.707	ENSCPBG00000001272	-	99	64.251
ENSCPBG00000012976	-	94	51.136	ENSCPBG00000009849	-	90	52.101

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000012976	-	94	55.502	ENSAMXG00000029161	-	80	70.000	Astyanax_mexicanus
ENSCPBG00000012976	-	99	70.400	ENSGAGG00000012452	-	94	72.826	Gopherus_agassizii
ENSCPBG00000012976	-	95	69.350	ENSGAGG00000014356	-	90	87.179	Gopherus_agassizii
ENSCPBG00000012976	-	99	75.205	ENSGAGG00000010833	-	91	83.871	Gopherus_agassizii
ENSCPBG00000012976	-	99	63.158	ENSGAGG00000002214	-	99	66.000	Gopherus_agassizii
ENSCPBG00000012976	-	93	57.205	ENSGAGG00000018445	-	99	56.827	Gopherus_agassizii
ENSCPBG00000012976	-	99	61.981	ENSGAGG00000001645	-	92	64.655	Gopherus_agassizii
ENSCPBG00000012976	-	99	61.741	ENSGAGG00000002179	-	99	66.667	Gopherus_agassizii
ENSCPBG00000012976	-	93	66.129	ENSGAGG00000016529	-	93	67.692	Gopherus_agassizii
ENSCPBG00000012976	-	99	62.092	ENSGAGG00000011487	-	88	71.429	Gopherus_agassizii
ENSCPBG00000012976	-	82	92.857	ENSGAGG00000020134	-	71	92.857	Gopherus_agassizii
ENSCPBG00000012976	-	87	83.784	ENSGAGG00000009272	-	99	83.784	Gopherus_agassizii
ENSCPBG00000012976	-	99	64.360	ENSGAGG00000010324	-	96	61.603	Gopherus_agassizii
ENSCPBG00000012976	-	99	68.651	ENSPSIG00000009893	-	99	68.651	Pelodiscus_sinensis
ENSCPBG00000012976	-	93	56.436	ENSPSIG00000000522	-	100	60.591	Pelodiscus_sinensis
ENSCPBG00000012976	-	99	63.538	ENSPSIG00000012865	-	98	63.251	Pelodiscus_sinensis
ENSCPBG00000012976	-	95	61.887	ENSPSIG00000002569	-	94	61.382	Pelodiscus_sinensis
ENSCPBG00000012976	-	94	62.771	ENSPSIG00000015216	-	98	63.203	Pelodiscus_sinensis
ENSCPBG00000012976	-	97	58.182	ENSPSIG00000015465	-	98	56.911	Pelodiscus_sinensis
ENSCPBG00000012976	-	96	59.654	ENSPSIG00000001026	-	93	59.524	Pelodiscus_sinensis
ENSCPBG00000012976	-	93	66.667	ENSTGUG00000018349	-	100	69.149	Taeniopygia_guttata
ENSCPBG00000012976	-	93	63.095	ENSTGUG00000018542	-	100	62.791	Taeniopygia_guttata
ENSCPBG00000012976	-	93	57.364	ENSTGUG00000016781	-	99	58.364	Taeniopygia_guttata
ENSCPBG00000012976	-	93	59.144	ENSTGUG00000016850	-	100	59.144	Taeniopygia_guttata
ENSCPBG00000012976	-	93	58.974	ENSTGUG00000018445	-	99	59.898	Taeniopygia_guttata
ENSCPBG00000012976	-	93	59.701	ENSTGUG00000014614	-	98	60.504	Taeniopygia_guttata
ENSCPBG00000012976	-	93	58.264	ENSTGUG00000016516	-	99	61.538	Taeniopygia_guttata
ENSCPBG00000012976	-	93	63.333	ENSTGUG00000018327	-	100	65.152	Taeniopygia_guttata
ENSCPBG00000012976	-	93	58.333	ENSTGUG00000018374	-	99	62.879	Taeniopygia_guttata
ENSCPBG00000012976	-	93	56.842	ENSTGUG00000015260	-	100	59.036	Taeniopygia_guttata
ENSCPBG00000012976	-	93	58.879	ENSTGUG00000014888	-	98	61.026	Taeniopygia_guttata
ENSCPBG00000012976	-	98	58.333	ENSTGUG00000013736	-	99	61.500	Taeniopygia_guttata
ENSCPBG00000012976	-	93	62.992	ENSTGUG00000018518	-	100	62.992	Taeniopygia_guttata