EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000013203 (Gene tree)
Gene ID: 101942756
Gene Symbol: SMARCAD1
Alias: DKFZP762K2015|ETL1|KIAA1122
Full Name: SWI/SNF-related%2C matrix-associated actin-dependent regulator of chromatin%2C subfamily a%2C containing DEAD/H box 1
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Plus strand
Length: 79470 bases
Position: chrKK088191.1:1563260-1642729
Accession: 18398
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000018065	ResIII	PF04851.15	4.1e-09	1	1
ENSCPBP00000018060	ResIII	PF04851.15	4.4e-09	1	1
ENSCPBP00000018061	ResIII	PF04851.15	4.5e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000021338	SMARCAD1-202	3567	-	ENSCPBP00000018061	1032 (aa)	-	UPI000388D02B
ENSCPBT00000021342	SMARCAD1-203	3915	-	ENSCPBP00000018065	974 (aa)	-	-
ENSCPBT00000021337	SMARCAD1-201	3374	-	ENSCPBP00000018060	1030 (aa)	XP_005278515	UPI000388D8B9

Gene Model

Click here to download ENSCPBG00000013203's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000013203's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000013203	SMARCAD1	50	38.372	ENSCPBG00000025739	HELLS	78	37.615
ENSCPBG00000013203	SMARCAD1	50	37.247	ENSCPBG00000018049	-	53	36.973
ENSCPBG00000013203	SMARCAD1	50	33.088	ENSCPBG00000003204	-	60	32.911

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000013203	SMARCAD1	100	74.256	ENSG00000163104	SMARCAD1	100	85.427	Homo_sapiens
ENSCPBG00000013203	SMARCAD1	100	64.434	ENSAPOG00000011446	smarcad1a	84	64.275	Acanthochromis_polyacanthus
ENSCPBG00000013203	SMARCAD1	100	73.775	ENSAMEG00000005844	SMARCAD1	100	73.538	Ailuropoda_melanoleuca
ENSCPBG00000013203	SMARCAD1	67	69.533	ENSACIG00000018326	smarcad1a	93	64.627	Amphilophus_citrinellus
ENSCPBG00000013203	SMARCAD1	93	65.422	ENSAOCG00000019762	smarcad1a	90	65.179	Amphiprion_ocellaris
ENSCPBG00000013203	SMARCAD1	97	65.584	ENSAPEG00000003889	smarcad1a	90	65.327	Amphiprion_percula
ENSCPBG00000013203	SMARCAD1	78	65.436	ENSATEG00000015608	smarcad1a	92	62.621	Anabas_testudineus
ENSCPBG00000013203	SMARCAD1	93	80.952	ENSAPLG00000004630	SMARCAD1	100	81.677	Anas_platyrhynchos
ENSCPBG00000013203	SMARCAD1	100	74.131	ENSACAG00000013554	SMARCAD1	100	74.110	Anolis_carolinensis
ENSCPBG00000013203	SMARCAD1	100	73.921	ENSANAG00000020488	SMARCAD1	99	77.729	Aotus_nancymaae
ENSCPBG00000013203	SMARCAD1	100	50.182	ENSACLG00000017063	smarcad1a	100	50.227	Astatotilapia_calliptera
ENSCPBG00000013203	SMARCAD1	66	62.774	ENSAMXG00000015470	smarcad1a	95	62.774	Astyanax_mexicanus
ENSCPBG00000013203	SMARCAD1	80	56.683	ENSAMXG00000019130	smarcad1b	99	51.919	Astyanax_mexicanus
ENSCPBG00000013203	SMARCAD1	100	74.138	ENSBTAG00000017061	SMARCAD1	100	73.563	Bos_taurus
ENSCPBG00000013203	SMARCAD1	60	43.345	WBGene00010845	M03C11.8	63	42.991	Caenorhabditis_elegans
ENSCPBG00000013203	SMARCAD1	100	74.352	ENSCJAG00000006778	SMARCAD1	100	73.679	Callithrix_jacchus
ENSCPBG00000013203	SMARCAD1	100	73.896	ENSCAFG00000010026	SMARCAD1	100	73.634	Canis_familiaris
ENSCPBG00000013203	SMARCAD1	85	78.378	ENSCAFG00020003994	SMARCAD1	99	78.378	Canis_lupus_dingo
ENSCPBG00000013203	SMARCAD1	100	74.305	ENSCHIG00000012905	SMARCAD1	100	73.634	Capra_hircus
ENSCPBG00000013203	SMARCAD1	100	74.184	ENSTSYG00000002706	SMARCAD1	100	73.352	Carlito_syrichta
ENSCPBG00000013203	SMARCAD1	91	60.874	ENSCAPG00000016744	SMARCAD1	96	61.900	Cavia_aperea
ENSCPBG00000013203	SMARCAD1	100	73.352	ENSCPOG00000011398	SMARCAD1	100	73.077	Cavia_porcellus
ENSCPBG00000013203	SMARCAD1	100	74.063	ENSCCAG00000022264	SMARCAD1	100	85.260	Cebus_capucinus
ENSCPBG00000013203	SMARCAD1	100	74.159	ENSCATG00000035663	SMARCAD1	99	78.491	Cercocebus_atys
ENSCPBG00000013203	SMARCAD1	81	78.910	ENSCSAG00000004186	SMARCAD1	100	78.910	Chlorocebus_sabaeus
ENSCPBG00000013203	SMARCAD1	64	50.448	ENSCING00000001688	-	99	50.448	Ciona_intestinalis
ENSCPBG00000013203	SMARCAD1	100	74.063	ENSCANG00000003556	SMARCAD1	100	85.427	Colobus_angolensis_palliatus
ENSCPBG00000013203	SMARCAD1	100	73.199	ENSCGRG00001015056	Smarcad1	100	72.467	Cricetulus_griseus_chok1gshd
ENSCPBG00000013203	SMARCAD1	100	73.199	ENSCGRG00000014087	Smarcad1	100	72.467	Cricetulus_griseus_crigri
ENSCPBG00000013203	SMARCAD1	81	61.816	ENSCSEG00000014419	-	95	51.806	Cynoglossus_semilaevis
ENSCPBG00000013203	SMARCAD1	99	62.824	ENSCSEG00000017903	smarcad1a	97	60.132	Cynoglossus_semilaevis
ENSCPBG00000013203	SMARCAD1	84	55.494	ENSDARG00000014041	smarcad1a	91	56.402	Danio_rerio
ENSCPBG00000013203	SMARCAD1	93	51.327	ENSDARG00000073721	smarcad1b	98	51.731	Danio_rerio
ENSCPBG00000013203	SMARCAD1	100	73.391	ENSDNOG00000000806	-	100	73.199	Dasypus_novemcinctus
ENSCPBG00000013203	SMARCAD1	100	72.430	ENSDORG00000012331	Smarcad1	100	71.783	Dipodomys_ordii
ENSCPBG00000013203	SMARCAD1	63	45.929	FBgn0032157	Etl1	80	44.477	Drosophila_melanogaster
ENSCPBG00000013203	SMARCAD1	61	46.318	ENSEBUG00000003969	smarcad1a	96	46.191	Eptatretus_burgeri
ENSCPBG00000013203	SMARCAD1	100	74.067	ENSEASG00005012382	SMARCAD1	100	73.473	Equus_asinus_asinus
ENSCPBG00000013203	SMARCAD1	100	74.067	ENSECAG00000011562	SMARCAD1	100	73.473	Equus_caballus
ENSCPBG00000013203	SMARCAD1	100	50.785	ENSELUG00000018535	smarcad1a	100	50.647	Esox_lucius
ENSCPBG00000013203	SMARCAD1	93	50.598	ENSELUG00000019154	smarcad1b	93	51.141	Esox_lucius
ENSCPBG00000013203	SMARCAD1	100	73.896	ENSFCAG00000003958	SMARCAD1	100	85.762	Felis_catus
ENSCPBG00000013203	SMARCAD1	100	76.499	ENSFALG00000006089	SMARCAD1	100	76.596	Ficedula_albicollis
ENSCPBG00000013203	SMARCAD1	100	73.942	ENSFDAG00000017027	SMARCAD1	100	73.136	Fukomys_damarensis
ENSCPBG00000013203	SMARCAD1	65	65.075	ENSFHEG00000012778	smarcad1a	67	61.885	Fundulus_heteroclitus
ENSCPBG00000013203	SMARCAD1	83	57.937	ENSGMOG00000018995	smarcad1a	97	58.218	Gadus_morhua
ENSCPBG00000013203	SMARCAD1	85	75.651	ENSGALG00000037339	SMARCAD1	99	75.651	Gallus_gallus
ENSCPBG00000013203	SMARCAD1	62	66.562	ENSGAFG00000013498	smarcad1a	100	46.602	Gambusia_affinis
ENSCPBG00000013203	SMARCAD1	85	57.675	ENSGACG00000007327	smarcad1a	99	57.919	Gasterosteus_aculeatus
ENSCPBG00000013203	SMARCAD1	100	97.433	ENSGAGG00000008582	SMARCAD1	100	97.379	Gopherus_agassizii
ENSCPBG00000013203	SMARCAD1	100	74.256	ENSGGOG00000023001	SMARCAD1	100	73.583	Gorilla_gorilla
ENSCPBG00000013203	SMARCAD1	100	73.538	ENSHGLG00000005070	SMARCAD1	100	72.989	Heterocephalus_glaber_female
ENSCPBG00000013203	SMARCAD1	100	73.538	ENSHGLG00100006812	SMARCAD1	100	72.989	Heterocephalus_glaber_male
ENSCPBG00000013203	SMARCAD1	82	64.286	ENSHCOG00000007848	smarcad1a	83	64.286	Hippocampus_comes
ENSCPBG00000013203	SMARCAD1	62	65.312	ENSIPUG00000000242	smarcad1a	95	53.446	Ictalurus_punctatus
ENSCPBG00000013203	SMARCAD1	93	52.263	ENSIPUG00000022817	smarcad1b	99	52.415	Ictalurus_punctatus
ENSCPBG00000013203	SMARCAD1	100	73.871	ENSSTOG00000001227	SMARCAD1	100	73.199	Ictidomys_tridecemlineatus
ENSCPBG00000013203	SMARCAD1	100	73.583	ENSJJAG00000022342	Smarcad1	100	72.849	Jaculus_jaculus
ENSCPBG00000013203	SMARCAD1	96	64.577	ENSLBEG00000008088	smarcad1a	99	61.765	Labrus_bergylta
ENSCPBG00000013203	SMARCAD1	100	57.402	ENSLOCG00000012909	smarcad1a	100	57.388	Lepisosteus_oculatus
ENSCPBG00000013203	SMARCAD1	100	72.430	ENSLAFG00000000040	SMARCAD1	100	71.950	Loxodonta_africana
ENSCPBG00000013203	SMARCAD1	100	74.159	ENSMFAG00000042606	SMARCAD1	99	78.491	Macaca_fascicularis
ENSCPBG00000013203	SMARCAD1	85	78.491	ENSMMUG00000022242	SMARCAD1	99	78.491	Macaca_mulatta
ENSCPBG00000013203	SMARCAD1	100	74.256	ENSMNEG00000038117	SMARCAD1	100	85.595	Macaca_nemestrina
ENSCPBG00000013203	SMARCAD1	100	74.159	ENSMLEG00000038333	SMARCAD1	100	85.427	Mandrillus_leucophaeus
ENSCPBG00000013203	SMARCAD1	100	50.182	ENSMZEG00005005203	smarcad1a	100	50.227	Maylandia_zebra
ENSCPBG00000013203	SMARCAD1	93	70.021	ENSMGAG00000005577	SMARCAD1	100	70.021	Meleagris_gallopavo
ENSCPBG00000013203	SMARCAD1	100	73.103	ENSMAUG00000008417	Smarcad1	100	72.275	Mesocricetus_auratus
ENSCPBG00000013203	SMARCAD1	100	73.467	ENSMICG00000009746	SMARCAD1	100	73.493	Microcebus_murinus
ENSCPBG00000013203	SMARCAD1	100	72.579	ENSMOCG00000017142	Smarcad1	100	71.893	Microtus_ochrogaster
ENSCPBG00000013203	SMARCAD1	77	60.886	ENSMMOG00000000275	smarcad1a	98	60.886	Mola_mola
ENSCPBG00000013203	SMARCAD1	100	75.143	ENSMODG00000019268	SMARCAD1	100	75.723	Monodelphis_domestica
ENSCPBG00000013203	SMARCAD1	95	77.385	MGP_CAROLIEiJ_G0028458	-	77	77.385	Mus_caroli
ENSCPBG00000013203	SMARCAD1	100	72.334	ENSMUSG00000029920	Smarcad1	100	71.962	Mus_musculus
ENSCPBG00000013203	SMARCAD1	100	72.622	MGP_PahariEiJ_G0022198	Smarcad1	100	72.249	Mus_pahari
ENSCPBG00000013203	SMARCAD1	100	72.526	MGP_SPRETEiJ_G0029462	Smarcad1	100	72.153	Mus_spretus
ENSCPBG00000013203	SMARCAD1	100	73.921	ENSMPUG00000002111	SMARCAD1	100	73.346	Mustela_putorius_furo
ENSCPBG00000013203	SMARCAD1	100	72.911	ENSMLUG00000000425	SMARCAD1	100	72.867	Myotis_lucifugus
ENSCPBG00000013203	SMARCAD1	100	72.666	ENSNGAG00000000810	Smarcad1	100	72.474	Nannospalax_galili
ENSCPBG00000013203	SMARCAD1	66	63.464	ENSNBRG00000012749	smarcad1a	89	60.160	Neolamprologus_brichardi
ENSCPBG00000013203	SMARCAD1	100	74.256	ENSNLEG00000014225	SMARCAD1	100	85.427	Nomascus_leucogenys
ENSCPBG00000013203	SMARCAD1	100	73.532	ENSODEG00000004334	SMARCAD1	100	72.641	Octodon_degus
ENSCPBG00000013203	SMARCAD1	63	67.588	ENSONIG00000015059	smarcad1a	91	59.152	Oreochromis_niloticus
ENSCPBG00000013203	SMARCAD1	80	83.333	ENSOANG00000013764	SMARCAD1	99	83.333	Ornithorhynchus_anatinus
ENSCPBG00000013203	SMARCAD1	100	74.159	ENSOCUG00000017283	SMARCAD1	100	73.487	Oryctolagus_cuniculus
ENSCPBG00000013203	SMARCAD1	94	66.822	ENSORLG00000004869	smarcad1a	86	66.822	Oryzias_latipes
ENSCPBG00000013203	SMARCAD1	94	66.822	ENSORLG00020020569	smarcad1a	86	61.317	Oryzias_latipes_hni
ENSCPBG00000013203	SMARCAD1	91	66.667	ENSORLG00015009045	smarcad1a	86	61.180	Oryzias_latipes_hsok
ENSCPBG00000013203	SMARCAD1	65	65.465	ENSOMEG00000023032	smarcad1a	70	61.957	Oryzias_melastigma
ENSCPBG00000013203	SMARCAD1	100	73.058	ENSOGAG00000011444	SMARCAD1	100	72.483	Otolemur_garnettii
ENSCPBG00000013203	SMARCAD1	100	74.209	ENSOARG00000017851	SMARCAD1	100	73.538	Ovis_aries
ENSCPBG00000013203	SMARCAD1	100	74.256	ENSPPAG00000035715	SMARCAD1	100	73.583	Pan_paniscus
ENSCPBG00000013203	SMARCAD1	100	73.896	ENSPPRG00000024756	SMARCAD1	100	85.762	Panthera_pardus
ENSCPBG00000013203	SMARCAD1	100	73.755	ENSPTIG00000017868	SMARCAD1	100	73.180	Panthera_tigris_altaica
ENSCPBG00000013203	SMARCAD1	100	74.256	ENSPTRG00000023126	SMARCAD1	100	85.427	Pan_troglodytes
ENSCPBG00000013203	SMARCAD1	100	72.945	ENSPANG00000019757	SMARCAD1	100	72.510	Papio_anubis
ENSCPBG00000013203	SMARCAD1	100	92.367	ENSPSIG00000010255	SMARCAD1	100	92.850	Pelodiscus_sinensis
ENSCPBG00000013203	SMARCAD1	62	65.528	ENSPMGG00000010735	smarcad1a	99	61.952	Periophthalmus_magnuspinnatus
ENSCPBG00000013203	SMARCAD1	100	62.863	ENSPEMG00000001854	Smarcad1	100	62.186	Peromyscus_maniculatus_bairdii
ENSCPBG00000013203	SMARCAD1	100	46.713	ENSPMAG00000003516	smarcad1a	99	47.109	Petromyzon_marinus
ENSCPBG00000013203	SMARCAD1	77	83.187	ENSPCIG00000008137	SMARCAD1	99	84.367	Phascolarctos_cinereus
ENSCPBG00000013203	SMARCAD1	82	66.199	ENSPLAG00000000108	smarcad1a	87	62.644	Poecilia_latipinna
ENSCPBG00000013203	SMARCAD1	86	66.355	ENSPMEG00000009155	smarcad1a	87	62.787	Poecilia_mexicana
ENSCPBG00000013203	SMARCAD1	82	66.511	ENSPREG00000018185	smarcad1a	90	66.511	Poecilia_reticulata
ENSCPBG00000013203	SMARCAD1	100	74.113	ENSPPYG00000014935	SMARCAD1	100	73.538	Pongo_abelii
ENSCPBG00000013203	SMARCAD1	79	79.491	ENSPCOG00000020478	SMARCAD1	99	71.275	Propithecus_coquereli
ENSCPBG00000013203	SMARCAD1	100	72.414	ENSPVAG00000001760	SMARCAD1	100	72.414	Pteropus_vampyrus
ENSCPBG00000013203	SMARCAD1	66	63.173	ENSPNYG00000010087	smarcad1a	89	59.893	Pundamilia_nyererei
ENSCPBG00000013203	SMARCAD1	86	55.483	ENSPNAG00000001663	smarcad1a	93	55.543	Pygocentrus_nattereri
ENSCPBG00000013203	SMARCAD1	80	57.346	ENSPNAG00000010099	smarcad1b	99	52.270	Pygocentrus_nattereri
ENSCPBG00000013203	SMARCAD1	100	73.033	ENSRNOG00000006391	Smarcad1	100	72.302	Rattus_norvegicus
ENSCPBG00000013203	SMARCAD1	100	74.063	ENSRBIG00000041989	SMARCAD1	100	73.391	Rhinopithecus_bieti
ENSCPBG00000013203	SMARCAD1	100	74.063	ENSRROG00000035309	SMARCAD1	100	73.391	Rhinopithecus_roxellana
ENSCPBG00000013203	SMARCAD1	100	74.063	ENSSBOG00000032114	SMARCAD1	100	85.260	Saimiri_boliviensis_boliviensis
ENSCPBG00000013203	SMARCAD1	100	76.245	ENSSHAG00000001279	SMARCAD1	100	76.448	Sarcophilus_harrisii
ENSCPBG00000013203	SMARCAD1	84	56.106	ENSSFOG00015016814	smarcad1b	100	50.509	Scleropages_formosus
ENSCPBG00000013203	SMARCAD1	75	57.766	ENSSFOG00015020909	smarcad1a	100	57.766	Scleropages_formosus
ENSCPBG00000013203	SMARCAD1	79	64.697	ENSSMAG00000001326	smarcad1a	83	61.162	Scophthalmus_maximus
ENSCPBG00000013203	SMARCAD1	66	63.793	ENSSDUG00000022338	smarcad1a	88	61.044	Seriola_dumerili
ENSCPBG00000013203	SMARCAD1	95	63.438	ENSSLDG00000024986	smarcad1a	100	60.643	Seriola_lalandi_dorsalis
ENSCPBG00000013203	SMARCAD1	58	91.122	ENSSPUG00000004633	SMARCAD1	100	91.122	Sphenodon_punctatus
ENSCPBG00000013203	SMARCAD1	97	64.255	ENSSPAG00000001970	smarcad1a	94	64.255	Stegastes_partitus
ENSCPBG00000013203	SMARCAD1	100	74.209	ENSSSCG00000009193	SMARCAD1	100	78.817	Sus_scrofa
ENSCPBG00000013203	SMARCAD1	76	81.509	ENSTGUG00000003127	SMARCAD1	100	82.013	Taeniopygia_guttata
ENSCPBG00000013203	SMARCAD1	85	57.432	ENSTNIG00000017585	smarcad1a	99	57.930	Tetraodon_nigroviridis
ENSCPBG00000013203	SMARCAD1	90	87.054	ENSTBEG00000002789	SMARCAD1	91	86.706	Tupaia_belangeri
ENSCPBG00000013203	SMARCAD1	97	74.702	ENSTTRG00000000226	SMARCAD1	98	75.834	Tursiops_truncatus
ENSCPBG00000013203	SMARCAD1	92	81.818	ENSUAMG00000022262	SMARCAD1	99	81.941	Ursus_americanus
ENSCPBG00000013203	SMARCAD1	100	73.846	ENSUMAG00000004549	SMARCAD1	100	73.608	Ursus_maritimus
ENSCPBG00000013203	SMARCAD1	100	73.800	ENSVVUG00000007271	SMARCAD1	97	82.378	Vulpes_vulpes
ENSCPBG00000013203	SMARCAD1	84	67.849	ENSXETG00000019214	smarcad1	100	67.845	Xenopus_tropicalis
ENSCPBG00000013203	SMARCAD1	75	60.103	ENSXCOG00000005232	smarcad1a	87	61.702	Xiphophorus_couchianus