EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000013243 (Gene tree)
Gene ID: 101953677
Gene Symbol: RAB1A
Alias: RAB1|YPT1
Full Name: RAB1A%2C member RAS oncogene family
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Minus strand
Length: 24783 bases
Position: chrKK083020.1:2212975-2237757
Accession: 9758
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000018123	MMR_HSR1	PF01926.23	2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000021409	RAB1A-201	940	-	ENSCPBP00000018123	205 (aa)	XP_005287289	UPI00005E74B0

Gene Model

Click here to download ENSCPBG00000013243's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000013243's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000013243	RAB1A	57	35.537	ENSCPBG00000023664	-	52	35.537
ENSCPBG00000013243	RAB1A	88	34.409	ENSCPBG00000011715	-	80	34.409
ENSCPBG00000013243	RAB1A	57	31.933	ENSCPBG00000024707	ARL4C	61	31.933
ENSCPBG00000013243	RAB1A	80	38.415	ENSCPBG00000016544	NRAS	86	38.415
ENSCPBG00000013243	RAB1A	61	34.127	ENSCPBG00000018802	-	94	34.783
ENSCPBG00000013243	RAB1A	76	38.994	ENSCPBG00000001542	RAB9B	79	38.994
ENSCPBG00000013243	RAB1A	76	38.365	ENSCPBG00000016033	RAB9A	73	38.365
ENSCPBG00000013243	RAB1A	84	45.349	ENSCPBG00000025817	RAB25	81	45.349
ENSCPBG00000013243	RAB1A	94	44.000	ENSCPBG00000025819	-	98	44.000
ENSCPBG00000013243	RAB1A	82	49.704	ENSCPBG00000028375	RAB12	69	49.704
ENSCPBG00000013243	RAB1A	98	38.350	ENSCPBG00000027605	RAB33B	91	38.350
ENSCPBG00000013243	RAB1A	80	47.619	ENSCPBG00000012042	RAB33A	66	47.619
ENSCPBG00000013243	RAB1A	80	35.928	ENSCPBG00000013681	MRAS	80	35.928
ENSCPBG00000013243	RAB1A	100	42.326	ENSCPBG00000009941	RAB14	100	42.326
ENSCPBG00000013243	RAB1A	60	32.540	ENSCPBG00000016255	ARL4D	62	32.540
ENSCPBG00000013243	RAB1A	94	36.493	ENSCPBG00000002289	RAB36	67	36.493
ENSCPBG00000013243	RAB1A	68	30.496	ENSCPBG00000002364	ARL3	72	30.496
ENSCPBG00000013243	RAB1A	80	44.242	ENSCPBG00000011245	RAB42	80	45.223
ENSCPBG00000013243	RAB1A	96	39.394	ENSCPBG00000011236	-	92	39.394
ENSCPBG00000013243	RAB1A	93	46.597	ENSCPBG00000011914	RAB19	88	46.597
ENSCPBG00000013243	RAB1A	80	37.576	ENSCPBG00000009289	-	95	35.912
ENSCPBG00000013243	RAB1A	95	45.178	ENSCPBG00000027619	-	96	45.178
ENSCPBG00000013243	RAB1A	57	35.294	ENSCPBG00000018327	ARL14	61	35.294
ENSCPBG00000013243	RAB1A	82	32.544	ENSCPBG00000018286	RHEB	91	32.544
ENSCPBG00000013243	RAB1A	95	43.299	ENSCPBG00000012712	RAB5B	90	43.299
ENSCPBG00000013243	RAB1A	95	43.814	ENSCPBG00000022559	RAB5A	90	43.814
ENSCPBG00000013243	RAB1A	97	45.540	ENSCPBG00000012691	RAB2B	99	45.540
ENSCPBG00000013243	RAB1A	78	30.909	ENSCPBG00000022284	DNAJC27	60	30.909
ENSCPBG00000013243	RAB1A	94	38.308	ENSCPBG00000021406	RAB6B	93	38.308
ENSCPBG00000013243	RAB1A	90	48.108	ENSCPBG00000023254	RAB2A	99	44.762
ENSCPBG00000013243	RAB1A	95	38.144	ENSCPBG00000023927	RAB22A	97	38.144
ENSCPBG00000013243	RAB1A	80	38.182	ENSCPBG00000015094	-	88	38.182
ENSCPBG00000013243	RAB1A	99	53.960	ENSCPBG00000012631	RAB35	100	53.960
ENSCPBG00000013243	RAB1A	84	34.463	ENSCPBG00000013941	-	93	34.463
ENSCPBG00000013243	RAB1A	95	44.949	ENSCPBG00000015839	-	95	44.949
ENSCPBG00000013243	RAB1A	58	34.454	ENSCPBG00000010155	ARL8A	62	34.454
ENSCPBG00000013243	RAB1A	75	33.987	ENSCPBG00000022640	RAB23	73	32.370
ENSCPBG00000013243	RAB1A	57	31.933	ENSCPBG00000024120	ARL4A	59	31.933
ENSCPBG00000013243	RAB1A	85	51.149	ENSCPBG00000017056	-	80	51.149
ENSCPBG00000013243	RAB1A	99	93.069	ENSCPBG00000022446	RAB1B	100	93.069
ENSCPBG00000013243	RAB1A	85	52.299	ENSCPBG00000014614	RAB11A	81	52.299
ENSCPBG00000013243	RAB1A	86	43.820	ENSCPBG00000001057	RAB39B	84	43.820
ENSCPBG00000013243	RAB1A	80	49.697	ENSCPBG00000016907	RAB15	78	49.697
ENSCPBG00000013243	RAB1A	77	39.264	ENSCPBG00000020275	RAB34	62	39.264
ENSCPBG00000013243	RAB1A	81	51.205	ENSCPBG00000006855	RAB30	82	51.205
ENSCPBG00000013243	RAB1A	58	32.773	ENSCPBG00000014937	ARL8B	62	32.773
ENSCPBG00000013243	RAB1A	87	32.973	ENSCPBG00000028244	RERG	90	32.973
ENSCPBG00000013243	RAB1A	95	37.186	ENSCPBG00000014340	RAB41	91	37.186
ENSCPBG00000013243	RAB1A	78	39.264	ENSCPBG00000014343	RAB7A	79	39.264
ENSCPBG00000013243	RAB1A	74	32.237	ENSCPBG00000022721	RRAS2	80	32.927
ENSCPBG00000013243	RAB1A	94	38.889	ENSCPBG00000000041	RAB6A	93	38.889

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000013243	RAB1A	100	99.512	ENSG00000138069	RAB1A	100	100.000	Homo_sapiens
ENSCPBG00000013243	RAB1A	99	96.040	ENSAPOG00000008143	-	100	96.040	Acanthochromis_polyacanthus
ENSCPBG00000013243	RAB1A	100	99.512	ENSAMEG00000001127	RAB1A	100	99.512	Ailuropoda_melanoleuca
ENSCPBG00000013243	RAB1A	99	96.040	ENSAOCG00000020606	-	100	96.040	Amphiprion_ocellaris
ENSCPBG00000013243	RAB1A	99	96.040	ENSAPEG00000022488	-	100	96.040	Amphiprion_percula
ENSCPBG00000013243	RAB1A	100	99.512	ENSANAG00000020929	RAB1A	100	99.512	Aotus_nancymaae
ENSCPBG00000013243	RAB1A	99	96.535	ENSACLG00000003326	-	100	96.535	Astatotilapia_calliptera
ENSCPBG00000013243	RAB1A	99	94.554	ENSAMXG00000034850	-	100	94.554	Astyanax_mexicanus
ENSCPBG00000013243	RAB1A	100	99.512	ENSBTAG00000016720	RAB1A	100	99.512	Bos_taurus
ENSCPBG00000013243	RAB1A	100	99.512	ENSCJAG00000046275	RAB1A	100	99.512	Callithrix_jacchus
ENSCPBG00000013243	RAB1A	100	99.512	ENSCAFG00000003187	RAB1A	100	99.512	Canis_familiaris
ENSCPBG00000013243	RAB1A	100	99.512	ENSCAFG00020026971	RAB1A	100	99.512	Canis_lupus_dingo
ENSCPBG00000013243	RAB1A	99	96.585	ENSCHIG00000014060	RAB1A	100	96.585	Capra_hircus
ENSCPBG00000013243	RAB1A	100	97.561	ENSTSYG00000005996	RAB1A	100	99.492	Carlito_syrichta
ENSCPBG00000013243	RAB1A	100	99.512	ENSCPOG00000015437	RAB1A	100	99.512	Cavia_porcellus
ENSCPBG00000013243	RAB1A	100	99.512	ENSCCAG00000021869	RAB1A	100	99.512	Cebus_capucinus
ENSCPBG00000013243	RAB1A	100	99.512	ENSCATG00000030853	RAB1A	100	99.512	Cercocebus_atys
ENSCPBG00000013243	RAB1A	100	99.512	ENSCLAG00000014766	RAB1A	100	99.512	Chinchilla_lanigera
ENSCPBG00000013243	RAB1A	100	97.073	ENSCANG00000035916	RAB1A	100	97.073	Colobus_angolensis_palliatus
ENSCPBG00000013243	RAB1A	100	99.512	ENSCGRG00001012691	-	100	99.512	Cricetulus_griseus_chok1gshd
ENSCPBG00000013243	RAB1A	100	99.512	ENSCGRG00000008456	-	100	99.512	Cricetulus_griseus_crigri
ENSCPBG00000013243	RAB1A	100	99.512	ENSDNOG00000018236	RAB1A	100	99.512	Dasypus_novemcinctus
ENSCPBG00000013243	RAB1A	100	99.512	ENSDORG00000028628	-	100	99.512	Dipodomys_ordii
ENSCPBG00000013243	RAB1A	100	84.466	FBgn0285937	Rab1	100	84.466	Drosophila_melanogaster
ENSCPBG00000013243	RAB1A	99	99.505	ENSETEG00000002205	RAB1A	100	99.505	Echinops_telfairi
ENSCPBG00000013243	RAB1A	100	99.512	ENSEASG00005007298	RAB1A	100	99.512	Equus_asinus_asinus
ENSCPBG00000013243	RAB1A	100	99.512	ENSECAG00000009926	RAB1A	100	99.512	Equus_caballus
ENSCPBG00000013243	RAB1A	99	99.505	ENSEEUG00000011721	RAB1A	100	99.505	Erinaceus_europaeus
ENSCPBG00000013243	RAB1A	99	95.588	ENSELUG00000012166	RAB1A	96	95.588	Esox_lucius
ENSCPBG00000013243	RAB1A	100	99.512	ENSFCAG00000002536	RAB1A	100	99.512	Felis_catus
ENSCPBG00000013243	RAB1A	99	98.030	ENSFALG00000013624	RAB1A	99	98.030	Ficedula_albicollis
ENSCPBG00000013243	RAB1A	100	99.512	ENSFDAG00000019505	-	100	99.512	Fukomys_damarensis
ENSCPBG00000013243	RAB1A	99	95.050	ENSFHEG00000014414	-	100	95.050	Fundulus_heteroclitus
ENSCPBG00000013243	RAB1A	100	100.000	ENSGALG00000031582	RAB1A	100	100.000	Gallus_gallus
ENSCPBG00000013243	RAB1A	99	95.050	ENSGAFG00000000918	-	100	95.050	Gambusia_affinis
ENSCPBG00000013243	RAB1A	100	100.000	ENSGAGG00000006802	RAB1A	100	100.000	Gopherus_agassizii
ENSCPBG00000013243	RAB1A	100	99.512	ENSGGOG00000026603	RAB1A	100	99.512	Gorilla_gorilla
ENSCPBG00000013243	RAB1A	100	99.512	ENSHGLG00000013585	RAB1A	100	99.512	Heterocephalus_glaber_female
ENSCPBG00000013243	RAB1A	99	97.059	ENSHGLG00100007994	RAB1A	99	97.059	Heterocephalus_glaber_male
ENSCPBG00000013243	RAB1A	100	99.512	ENSSTOG00000020693	-	100	99.512	Ictidomys_tridecemlineatus
ENSCPBG00000013243	RAB1A	96	99.492	ENSJJAG00000014396	Rab1a	100	99.492	Jaculus_jaculus
ENSCPBG00000013243	RAB1A	96	95.431	ENSKMAG00000014038	-	93	95.431	Kryptolebias_marmoratus
ENSCPBG00000013243	RAB1A	99	95.545	ENSLBEG00000028426	RAB1A	100	95.545	Labrus_bergylta
ENSCPBG00000013243	RAB1A	100	98.049	ENSLACG00000012869	RAB1A	100	98.049	Latimeria_chalumnae
ENSCPBG00000013243	RAB1A	100	99.512	ENSLAFG00000016666	RAB1A	100	99.512	Loxodonta_africana
ENSCPBG00000013243	RAB1A	100	99.512	ENSMFAG00000046246	RAB1A	100	99.512	Macaca_fascicularis
ENSCPBG00000013243	RAB1A	96	99.492	ENSMMUG00000021721	RAB1A	91	99.492	Macaca_mulatta
ENSCPBG00000013243	RAB1A	95	99.485	ENSMNEG00000028414	-	97	99.485	Macaca_nemestrina
ENSCPBG00000013243	RAB1A	100	99.512	ENSMLEG00000042535	RAB1A	100	99.512	Mandrillus_leucophaeus
ENSCPBG00000013243	RAB1A	99	96.535	ENSMZEG00005013959	-	100	96.535	Maylandia_zebra
ENSCPBG00000013243	RAB1A	96	100.000	ENSMGAG00000004611	RAB1A	98	100.000	Meleagris_gallopavo
ENSCPBG00000013243	RAB1A	100	99.024	ENSMAUG00000012156	Rab1a	100	99.024	Mesocricetus_auratus
ENSCPBG00000013243	RAB1A	100	99.512	ENSMICG00000012587	RAB1A	100	99.512	Microcebus_murinus
ENSCPBG00000013243	RAB1A	100	99.024	ENSMOCG00000017022	Rab1a	100	99.024	Microtus_ochrogaster
ENSCPBG00000013243	RAB1A	99	94.059	ENSMMOG00000018709	RAB1A	100	94.059	Mola_mola
ENSCPBG00000013243	RAB1A	100	100.000	ENSMODG00000003340	RAB1A	100	100.000	Monodelphis_domestica
ENSCPBG00000013243	RAB1A	100	99.512	MGP_CAROLIEiJ_G0016115	Rab1a	100	99.512	Mus_caroli
ENSCPBG00000013243	RAB1A	100	99.512	ENSMUSG00000020149	Rab1a	100	99.512	Mus_musculus
ENSCPBG00000013243	RAB1A	100	99.512	MGP_PahariEiJ_G0016776	Rab1a	100	99.512	Mus_pahari
ENSCPBG00000013243	RAB1A	100	99.512	MGP_SPRETEiJ_G0016958	Rab1a	100	99.512	Mus_spretus
ENSCPBG00000013243	RAB1A	100	99.512	ENSMPUG00000006139	RAB1A	82	99.512	Mustela_putorius_furo
ENSCPBG00000013243	RAB1A	100	99.512	ENSMLUG00000009489	RAB1A	100	99.512	Myotis_lucifugus
ENSCPBG00000013243	RAB1A	100	99.512	ENSNGAG00000005838	Rab1a	100	99.512	Nannospalax_galili
ENSCPBG00000013243	RAB1A	99	96.535	ENSNBRG00000020492	-	100	96.535	Neolamprologus_brichardi
ENSCPBG00000013243	RAB1A	96	99.492	ENSOPRG00000006595	RAB1A	100	99.492	Ochotona_princeps
ENSCPBG00000013243	RAB1A	94	99.479	ENSODEG00000011248	-	96	99.479	Octodon_degus
ENSCPBG00000013243	RAB1A	99	94.118	ENSONIG00000006819	-	100	94.118	Oreochromis_niloticus
ENSCPBG00000013243	RAB1A	100	100.000	ENSOANG00000012438	RAB1A	100	100.000	Ornithorhynchus_anatinus
ENSCPBG00000013243	RAB1A	100	99.512	ENSOCUG00000017003	RAB1A	100	99.512	Oryctolagus_cuniculus
ENSCPBG00000013243	RAB1A	100	99.512	ENSOGAG00000026181	RAB1A	100	99.512	Otolemur_garnettii
ENSCPBG00000013243	RAB1A	96	99.492	ENSOARG00000019997	RAB1A	97	99.492	Ovis_aries
ENSCPBG00000013243	RAB1A	99	99.505	ENSPPAG00000030253	RAB1A	100	99.505	Pan_paniscus
ENSCPBG00000013243	RAB1A	100	99.512	ENSPPRG00000025077	RAB1A	100	99.512	Panthera_pardus
ENSCPBG00000013243	RAB1A	96	99.492	ENSPTIG00000013471	RAB1A	97	99.492	Panthera_tigris_altaica
ENSCPBG00000013243	RAB1A	100	99.512	ENSPTRG00000011989	RAB1A	100	99.512	Pan_troglodytes
ENSCPBG00000013243	RAB1A	100	99.512	ENSPANG00000010485	RAB1A	100	99.512	Papio_anubis
ENSCPBG00000013243	RAB1A	99	97.044	ENSPSIG00000008028	RAB1A	99	97.044	Pelodiscus_sinensis
ENSCPBG00000013243	RAB1A	99	96.078	ENSPMGG00000021015	-	99	96.078	Periophthalmus_magnuspinnatus
ENSCPBG00000013243	RAB1A	100	99.512	ENSPEMG00000009340	Rab1a	100	99.512	Peromyscus_maniculatus_bairdii
ENSCPBG00000013243	RAB1A	100	100.000	ENSPCIG00000023212	RAB1A	100	100.000	Phascolarctos_cinereus
ENSCPBG00000013243	RAB1A	99	93.627	ENSPFOG00000000498	-	99	93.627	Poecilia_formosa
ENSCPBG00000013243	RAB1A	99	94.554	ENSPLAG00000015592	-	100	94.554	Poecilia_latipinna
ENSCPBG00000013243	RAB1A	99	94.554	ENSPMEG00000005288	-	100	94.554	Poecilia_mexicana
ENSCPBG00000013243	RAB1A	100	99.512	ENSPPYG00000012360	RAB1A	100	99.512	Pongo_abelii
ENSCPBG00000013243	RAB1A	100	99.512	ENSPCOG00000017244	RAB1A	100	99.512	Propithecus_coquereli
ENSCPBG00000013243	RAB1A	99	96.535	ENSPNYG00000015841	-	100	96.535	Pundamilia_nyererei
ENSCPBG00000013243	RAB1A	100	99.512	ENSRNOG00000004992	Rab1a	100	99.512	Rattus_norvegicus
ENSCPBG00000013243	RAB1A	100	99.512	ENSSBOG00000023732	RAB1A	100	99.512	Saimiri_boliviensis_boliviensis
ENSCPBG00000013243	RAB1A	98	98.507	ENSSHAG00000003597	RAB1A	98	98.507	Sarcophilus_harrisii
ENSCPBG00000013243	RAB1A	99	96.040	ENSSMAG00000021049	-	100	96.040	Scophthalmus_maximus
ENSCPBG00000013243	RAB1A	99	96.535	ENSSDUG00000022535	RAB1A	100	96.535	Seriola_dumerili
ENSCPBG00000013243	RAB1A	100	100.000	ENSSPUG00000012822	RAB1A	100	100.000	Sphenodon_punctatus
ENSCPBG00000013243	RAB1A	99	96.040	ENSSPAG00000012564	-	100	96.040	Stegastes_partitus
ENSCPBG00000013243	RAB1A	100	99.512	ENSSSCG00000008359	RAB1A	100	99.512	Sus_scrofa
ENSCPBG00000013243	RAB1A	100	97.561	ENSTGUG00000002328	RAB1A	100	97.561	Taeniopygia_guttata
ENSCPBG00000013243	RAB1A	99	95.545	ENSTRUG00000024994	RAB1A	100	95.545	Takifugu_rubripes
ENSCPBG00000013243	RAB1A	96	99.492	ENSUMAG00000021038	RAB1A	99	99.492	Ursus_maritimus
ENSCPBG00000013243	RAB1A	97	98.990	ENSVPAG00000005640	RAB1A	99	98.990	Vicugna_pacos
ENSCPBG00000013243	RAB1A	100	99.512	ENSVVUG00000027588	RAB1A	100	99.512	Vulpes_vulpes
ENSCPBG00000013243	RAB1A	99	95.050	ENSXMAG00000015776	-	100	95.050	Xiphophorus_maculatus