EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000013330 (Gene tree)
Gene ID: 101947113
Gene Symbol: DDX1
Alias: DBP-RB
Full Name: DEAD-box helicase 1
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Minus strand
Length: 34857 bases
Position: chrKK088203.1:3841696-3876552
Accession: 2734
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000019325	DEAD	PF00270.29	1.3e-77	1	1
ENSCPBP00000019265	DEAD	PF00270.29	1.6e-77	1	1
ENSCPBP00000018771	DEAD	PF00270.29	3.9e-64	1	1
ENSCPBP00000019156	DEAD	PF00270.29	4e-64	1	1
ENSCPBP00000019155	DEAD	PF00270.29	4.6e-64	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000022577	DDX1-202	2229	-	ENSCPBP00000019155	742 (aa)	-	-
ENSCPBT00000022760	DDX1-205	1872	-	ENSCPBP00000019325	623 (aa)	-	-
ENSCPBT00000022578	DDX1-203	2160	-	ENSCPBP00000019156	719 (aa)	-	-
ENSCPBT00000022694	DDX1-204	2133	-	ENSCPBP00000019265	710 (aa)	-	-
ENSCPBT00000022145	DDX1-201	2136	-	ENSCPBP00000018771	711 (aa)	-	-

Gene Model

Click here to download ENSCPBG00000013330's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000013330's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000013330	DDX1	68	43.333	ENSCPBG00000012105	DDX28	74	43.333
ENSCPBG00000013330	DDX1	61	42.105	ENSCPBG00000009806	DDX52	52	42.857
ENSCPBG00000013330	DDX1	63	40.678	ENSCPBG00000004323	DDX6	67	45.098
ENSCPBG00000013330	DDX1	62	44.615	ENSCPBG00000020967	-	73	44.615
ENSCPBG00000013330	DDX1	62	40.299	ENSCPBG00000025960	DDX55	63	40.299
ENSCPBG00000013330	DDX1	65	41.667	ENSCPBG00000012500	DDX49	84	41.667

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000013330	DDX1	99	92.271	ENSG00000079785	DDX1	99	87.364	Homo_sapiens
ENSCPBG00000013330	DDX1	99	84.244	ENSAPOG00000003166	ddx1	100	79.184	Acanthochromis_polyacanthus
ENSCPBG00000013330	DDX1	99	92.419	ENSAMEG00000001071	DDX1	99	87.398	Ailuropoda_melanoleuca
ENSCPBG00000013330	DDX1	86	82.309	ENSACIG00000017422	ddx1	97	80.526	Amphilophus_citrinellus
ENSCPBG00000013330	DDX1	99	82.797	ENSAOCG00000015436	ddx1	89	84.500	Amphiprion_ocellaris
ENSCPBG00000013330	DDX1	99	85.209	ENSAPEG00000007699	ddx1	100	80.136	Amphiprion_percula
ENSCPBG00000013330	DDX1	99	83.762	ENSATEG00000003965	ddx1	96	80.216	Anabas_testudineus
ENSCPBG00000013330	DDX1	99	94.222	ENSAPLG00000011093	DDX1	99	88.243	Anas_platyrhynchos
ENSCPBG00000013330	DDX1	99	91.787	ENSACAG00000011036	DDX1	99	86.023	Anolis_carolinensis
ENSCPBG00000013330	DDX1	99	92.593	ENSANAG00000037912	DDX1	100	87.246	Aotus_nancymaae
ENSCPBG00000013330	DDX1	99	84.491	ENSACLG00000008850	ddx1	97	80.615	Astatotilapia_calliptera
ENSCPBG00000013330	DDX1	99	84.887	ENSAMXG00000002100	ddx1	99	79.891	Astyanax_mexicanus
ENSCPBG00000013330	DDX1	99	92.593	ENSBTAG00000009906	DDX1	99	87.364	Bos_taurus
ENSCPBG00000013330	DDX1	99	47.310	WBGene00021938	Y55F3BR.1	98	46.429	Caenorhabditis_elegans
ENSCPBG00000013330	DDX1	99	92.593	ENSCJAG00000007076	DDX1	99	87.500	Callithrix_jacchus
ENSCPBG00000013330	DDX1	99	92.915	ENSCAFG00000003686	DDX1	99	87.908	Canis_familiaris
ENSCPBG00000013330	DDX1	99	92.915	ENSCAFG00020026083	DDX1	99	87.908	Canis_lupus_dingo
ENSCPBG00000013330	DDX1	99	92.915	ENSCHIG00000011046	DDX1	99	87.772	Capra_hircus
ENSCPBG00000013330	DDX1	99	93.076	ENSTSYG00000002477	-	99	87.772	Carlito_syrichta
ENSCPBG00000013330	DDX1	97	66.283	ENSTSYG00000037396	-	95	66.718	Carlito_syrichta
ENSCPBG00000013330	DDX1	86	73.387	ENSCAPG00000008906	-	93	73.387	Cavia_aperea
ENSCPBG00000013330	DDX1	81	91.633	ENSCPOG00000032467	-	100	91.633	Cavia_porcellus
ENSCPBG00000013330	DDX1	88	87.404	ENSCPOG00000009816	-	94	87.404	Cavia_porcellus
ENSCPBG00000013330	DDX1	99	92.593	ENSCCAG00000030085	DDX1	100	87.246	Cebus_capucinus
ENSCPBG00000013330	DDX1	99	92.593	ENSCATG00000033924	DDX1	99	87.636	Cercocebus_atys
ENSCPBG00000013330	DDX1	99	92.432	ENSCLAG00000005434	DDX1	100	86.892	Chinchilla_lanigera
ENSCPBG00000013330	DDX1	99	92.593	ENSCSAG00000007883	DDX1	99	87.636	Chlorocebus_sabaeus
ENSCPBG00000013330	DDX1	66	100.000	ENSCHOG00000002171	DDX1	64	100.000	Choloepus_hoffmanni
ENSCPBG00000013330	DDX1	99	66.827	ENSCING00000001176	-	99	60.081	Ciona_intestinalis
ENSCPBG00000013330	DDX1	97	62.233	ENSCSAVG00000003028	-	99	56.966	Ciona_savignyi
ENSCPBG00000013330	DDX1	99	92.593	ENSCANG00000031530	DDX1	100	87.381	Colobus_angolensis_palliatus
ENSCPBG00000013330	DDX1	99	92.432	ENSCGRG00001013025	Ddx1	100	87.110	Cricetulus_griseus_chok1gshd
ENSCPBG00000013330	DDX1	99	92.432	ENSCGRG00000000676	Ddx1	100	87.110	Cricetulus_griseus_crigri
ENSCPBG00000013330	DDX1	99	84.740	ENSCSEG00000002630	ddx1	100	79.592	Cynoglossus_semilaevis
ENSCPBG00000013330	DDX1	99	84.578	ENSCVAG00000020927	ddx1	100	79.184	Cyprinodon_variegatus
ENSCPBG00000013330	DDX1	99	84.091	ENSDARG00000032117	ddx1	100	80.272	Danio_rerio
ENSCPBG00000013330	DDX1	99	92.754	ENSDNOG00000006905	DDX1	99	87.772	Dasypus_novemcinctus
ENSCPBG00000013330	DDX1	99	92.593	ENSDORG00000012847	Ddx1	100	87.110	Dipodomys_ordii
ENSCPBG00000013330	DDX1	100	59.200	FBgn0015075	Ddx1	99	56.414	Drosophila_melanogaster
ENSCPBG00000013330	DDX1	99	80.354	ENSETEG00000014259	DDX1	99	77.174	Echinops_telfairi
ENSCPBG00000013330	DDX1	66	76.321	ENSEBUG00000009800	-	99	76.321	Eptatretus_burgeri
ENSCPBG00000013330	DDX1	99	92.915	ENSEASG00005009335	DDX1	91	87.500	Equus_asinus_asinus
ENSCPBG00000013330	DDX1	93	92.561	ENSECAG00000016396	DDX1	100	86.963	Equus_caballus
ENSCPBG00000013330	DDX1	91	88.910	ENSEEUG00000001606	DDX1	89	88.910	Erinaceus_europaeus
ENSCPBG00000013330	DDX1	99	82.343	ENSELUG00000006743	ddx1	100	76.766	Esox_lucius
ENSCPBG00000013330	DDX1	99	93.076	ENSFCAG00000004680	DDX1	99	88.043	Felis_catus
ENSCPBG00000013330	DDX1	99	92.915	ENSFALG00000008696	DDX1	99	87.772	Ficedula_albicollis
ENSCPBG00000013330	DDX1	99	91.626	ENSFDAG00000021305	DDX1	100	86.703	Fukomys_damarensis
ENSCPBG00000013330	DDX1	99	84.084	ENSFHEG00000008444	ddx1	100	78.503	Fundulus_heteroclitus
ENSCPBG00000013330	DDX1	99	82.212	ENSGMOG00000011300	ddx1	99	76.861	Gadus_morhua
ENSCPBG00000013330	DDX1	99	94.042	ENSGALG00000016461	DDX1	99	88.587	Gallus_gallus
ENSCPBG00000013330	DDX1	99	84.084	ENSGAFG00000004706	ddx1	99	78.940	Gambusia_affinis
ENSCPBG00000013330	DDX1	99	83.280	ENSGACG00000011162	ddx1	99	77.853	Gasterosteus_aculeatus
ENSCPBG00000013330	DDX1	99	97.585	ENSGAGG00000021020	DDX1	99	92.120	Gopherus_agassizii
ENSCPBG00000013330	DDX1	99	92.271	ENSGGOG00000012482	DDX1	100	87.466	Gorilla_gorilla
ENSCPBG00000013330	DDX1	99	84.405	ENSHBUG00000014069	ddx1	100	79.650	Haplochromis_burtoni
ENSCPBG00000013330	DDX1	99	92.432	ENSHGLG00000000801	DDX1	99	87.364	Heterocephalus_glaber_female
ENSCPBG00000013330	DDX1	99	92.358	ENSHGLG00100000711	DDX1	100	87.347	Heterocephalus_glaber_male
ENSCPBG00000013330	DDX1	99	84.244	ENSHCOG00000011492	ddx1	95	79.484	Hippocampus_comes
ENSCPBG00000013330	DDX1	99	83.280	ENSIPUG00000003494	ddx1	99	78.261	Ictalurus_punctatus
ENSCPBG00000013330	DDX1	99	92.683	ENSSTOG00000003977	DDX1	100	87.619	Ictidomys_tridecemlineatus
ENSCPBG00000013330	DDX1	86	87.127	ENSJJAG00000013315	Ddx1	95	88.530	Jaculus_jaculus
ENSCPBG00000013330	DDX1	99	86.656	ENSKMAG00000011340	ddx1	99	81.250	Kryptolebias_marmoratus
ENSCPBG00000013330	DDX1	86	78.585	ENSLBEG00000008692	ddx1	97	76.190	Labrus_bergylta
ENSCPBG00000013330	DDX1	99	88.387	ENSLACG00000010529	DDX1	99	83.152	Latimeria_chalumnae
ENSCPBG00000013330	DDX1	99	86.443	ENSLOCG00000016473	ddx1	99	82.632	Lepisosteus_oculatus
ENSCPBG00000013330	DDX1	99	93.042	ENSLAFG00000002213	DDX1	100	86.910	Loxodonta_africana
ENSCPBG00000013330	DDX1	99	92.593	ENSMFAG00000033987	DDX1	99	87.636	Macaca_fascicularis
ENSCPBG00000013330	DDX1	99	92.593	ENSMMUG00000023437	DDX1	99	87.636	Macaca_mulatta
ENSCPBG00000013330	DDX1	99	92.593	ENSMNEG00000029189	DDX1	99	87.636	Macaca_nemestrina
ENSCPBG00000013330	DDX1	99	92.432	ENSMLEG00000030787	DDX1	99	87.500	Mandrillus_leucophaeus
ENSCPBG00000013330	DDX1	99	84.566	ENSMAMG00000015916	ddx1	99	79.484	Mastacembelus_armatus
ENSCPBG00000013330	DDX1	99	84.491	ENSMZEG00005015207	ddx1	97	80.615	Maylandia_zebra
ENSCPBG00000013330	DDX1	99	93.193	ENSMGAG00000014025	DDX1	100	84.032	Meleagris_gallopavo
ENSCPBG00000013330	DDX1	65	100.000	ENSMAUG00000016156	Ddx1	99	100.000	Mesocricetus_auratus
ENSCPBG00000013330	DDX1	99	92.593	ENSMICG00000001023	DDX1	99	87.500	Microcebus_murinus
ENSCPBG00000013330	DDX1	99	92.432	ENSMOCG00000000257	Ddx1	99	87.364	Microtus_ochrogaster
ENSCPBG00000013330	DDX1	86	82.309	ENSMMOG00000015397	ddx1	97	79.753	Mola_mola
ENSCPBG00000013330	DDX1	99	92.071	ENSMODG00000010275	DDX1	99	86.874	Monodelphis_domestica
ENSCPBG00000013330	DDX1	99	84.405	ENSMALG00000016409	ddx1	99	79.348	Monopterus_albus
ENSCPBG00000013330	DDX1	99	92.593	MGP_CAROLIEiJ_G0017622	Ddx1	99	87.500	Mus_caroli
ENSCPBG00000013330	DDX1	99	92.271	ENSMUSG00000037149	Ddx1	100	91.053	Mus_musculus
ENSCPBG00000013330	DDX1	99	92.593	MGP_PahariEiJ_G0029378	Ddx1	99	87.364	Mus_pahari
ENSCPBG00000013330	DDX1	99	92.271	MGP_SPRETEiJ_G0018464	Ddx1	97	90.196	Mus_spretus
ENSCPBG00000013330	DDX1	99	92.915	ENSMPUG00000013606	DDX1	99	88.043	Mustela_putorius_furo
ENSCPBG00000013330	DDX1	99	92.869	ENSMLUG00000003027	DDX1	98	87.636	Myotis_lucifugus
ENSCPBG00000013330	DDX1	99	92.846	ENSNGAG00000015783	Ddx1	100	87.755	Nannospalax_galili
ENSCPBG00000013330	DDX1	86	80.784	ENSNBRG00000020677	ddx1	91	77.058	Neolamprologus_brichardi
ENSCPBG00000013330	DDX1	99	92.432	ENSNLEG00000014417	DDX1	99	87.500	Nomascus_leucogenys
ENSCPBG00000013330	DDX1	99	89.431	ENSMEUG00000008254	DDX1	99	85.811	Notamacropus_eugenii
ENSCPBG00000013330	DDX1	85	100.000	ENSOPRG00000004290	DDX1	90	100.000	Ochotona_princeps
ENSCPBG00000013330	DDX1	99	92.432	ENSODEG00000000569	DDX1	99	87.636	Octodon_degus
ENSCPBG00000013330	DDX1	99	85.072	ENSONIG00000000513	ddx1	99	80.597	Oreochromis_niloticus
ENSCPBG00000013330	DDX1	86	90.841	ENSOANG00000005450	DDX1	96	90.841	Ornithorhynchus_anatinus
ENSCPBG00000013330	DDX1	99	92.915	ENSOCUG00000007010	DDX1	99	87.772	Oryctolagus_cuniculus
ENSCPBG00000013330	DDX1	99	83.923	ENSORLG00000016709	ddx1	99	78.940	Oryzias_latipes
ENSCPBG00000013330	DDX1	99	83.762	ENSORLG00020003290	ddx1	100	78.776	Oryzias_latipes_hni
ENSCPBG00000013330	DDX1	99	83.601	ENSORLG00015022438	ddx1	100	78.503	Oryzias_latipes_hsok
ENSCPBG00000013330	DDX1	98	79.869	ENSOMEG00000017620	ddx1	99	74.932	Oryzias_melastigma
ENSCPBG00000013330	DDX1	99	91.896	ENSOGAG00000008730	DDX1	100	87.110	Otolemur_garnettii
ENSCPBG00000013330	DDX1	99	92.545	ENSOARG00000016369	DDX1	100	87.381	Ovis_aries
ENSCPBG00000013330	DDX1	99	92.110	ENSPPAG00000027432	DDX1	99	87.228	Pan_paniscus
ENSCPBG00000013330	DDX1	99	93.076	ENSPPRG00000020556	DDX1	99	88.043	Panthera_pardus
ENSCPBG00000013330	DDX1	99	93.076	ENSPTIG00000008267	DDX1	99	88.043	Panthera_tigris_altaica
ENSCPBG00000013330	DDX1	99	92.110	ENSPTRG00000011670	DDX1	99	87.228	Pan_troglodytes
ENSCPBG00000013330	DDX1	99	92.432	ENSPANG00000025185	DDX1	99	87.500	Papio_anubis
ENSCPBG00000013330	DDX1	99	82.764	ENSPKIG00000012466	ddx1	100	78.503	Paramormyrops_kingsleyae
ENSCPBG00000013330	DDX1	65	96.278	ENSPSIG00000012292	DDX1	100	96.278	Pelodiscus_sinensis
ENSCPBG00000013330	DDX1	99	81.833	ENSPMGG00000000782	ddx1	99	77.869	Periophthalmus_magnuspinnatus
ENSCPBG00000013330	DDX1	99	92.593	ENSPEMG00000016389	Ddx1	100	87.246	Peromyscus_maniculatus_bairdii
ENSCPBG00000013330	DDX1	99	79.417	ENSPMAG00000009118	-	100	74.084	Petromyzon_marinus
ENSCPBG00000013330	DDX1	99	92.754	ENSPCIG00000010941	DDX1	99	87.908	Phascolarctos_cinereus
ENSCPBG00000013330	DDX1	87	80.031	ENSPFOG00000006873	-	99	80.031	Poecilia_formosa
ENSCPBG00000013330	DDX1	99	84.727	ENSPFOG00000011921	ddx1	99	79.348	Poecilia_formosa
ENSCPBG00000013330	DDX1	99	84.405	ENSPLAG00000005939	ddx1	99	79.076	Poecilia_latipinna
ENSCPBG00000013330	DDX1	99	84.887	ENSPMEG00000011140	ddx1	99	79.620	Poecilia_mexicana
ENSCPBG00000013330	DDX1	99	84.405	ENSPREG00000011751	ddx1	99	79.076	Poecilia_reticulata
ENSCPBG00000013330	DDX1	99	92.271	ENSPPYG00000012638	DDX1	99	87.364	Pongo_abelii
ENSCPBG00000013330	DDX1	99	76.490	ENSPCAG00000001491	DDX1	99	75.543	Procavia_capensis
ENSCPBG00000013330	DDX1	99	90.081	ENSPCOG00000028185	DDX1	100	85.210	Propithecus_coquereli
ENSCPBG00000013330	DDX1	99	92.754	ENSPVAG00000013618	DDX1	99	87.500	Pteropus_vampyrus
ENSCPBG00000013330	DDX1	99	84.084	ENSPNYG00000013839	ddx1	99	79.755	Pundamilia_nyererei
ENSCPBG00000013330	DDX1	86	82.682	ENSPNAG00000017033	ddx1	95	80.062	Pygocentrus_nattereri
ENSCPBG00000013330	DDX1	99	92.271	ENSRNOG00000006652	Ddx1	99	87.228	Rattus_norvegicus
ENSCPBG00000013330	DDX1	99	92.258	ENSRBIG00000041664	DDX1	99	92.110	Rhinopithecus_bieti
ENSCPBG00000013330	DDX1	99	92.110	ENSRROG00000031167	DDX1	99	87.228	Rhinopithecus_roxellana
ENSCPBG00000013330	DDX1	99	92.754	ENSSBOG00000027577	DDX1	100	87.381	Saimiri_boliviensis_boliviensis
ENSCPBG00000013330	DDX1	99	84.790	ENSSHAG00000009363	DDX1	99	80.780	Sarcophilus_harrisii
ENSCPBG00000013330	DDX1	99	82.637	ENSSFOG00015014476	ddx1	99	78.533	Scleropages_formosus
ENSCPBG00000013330	DDX1	99	82.797	ENSSMAG00000010094	ddx1	99	77.853	Scophthalmus_maximus
ENSCPBG00000013330	DDX1	99	84.405	ENSSDUG00000012334	ddx1	99	79.348	Seriola_dumerili
ENSCPBG00000013330	DDX1	99	83.923	ENSSLDG00000025345	ddx1	99	78.940	Seriola_lalandi_dorsalis
ENSCPBG00000013330	DDX1	89	93.069	ENSSARG00000004536	DDX1	92	84.551	Sorex_araneus
ENSCPBG00000013330	DDX1	99	92.110	ENSSPUG00000018835	DDX1	99	87.364	Sphenodon_punctatus
ENSCPBG00000013330	DDX1	99	78.778	ENSSPAG00000023554	ddx1	99	74.457	Stegastes_partitus
ENSCPBG00000013330	DDX1	99	92.593	ENSSSCG00000008619	DDX1	99	87.500	Sus_scrofa
ENSCPBG00000013330	DDX1	99	92.754	ENSTGUG00000013096	DDX1	100	87.871	Taeniopygia_guttata
ENSCPBG00000013330	DDX1	99	84.355	ENSTRUG00000015765	ddx1	99	79.212	Takifugu_rubripes
ENSCPBG00000013330	DDX1	99	84.405	ENSTNIG00000016309	ddx1	99	79.212	Tetraodon_nigroviridis
ENSCPBG00000013330	DDX1	99	87.642	ENSTBEG00000008454	DDX1	100	87.022	Tupaia_belangeri
ENSCPBG00000013330	DDX1	99	92.110	ENSTTRG00000005081	DDX1	99	87.092	Tursiops_truncatus
ENSCPBG00000013330	DDX1	85	81.132	ENSUAMG00000017375	DDX1	93	81.132	Ursus_americanus
ENSCPBG00000013330	DDX1	99	92.683	ENSUMAG00000023450	DDX1	100	87.755	Ursus_maritimus
ENSCPBG00000013330	DDX1	82	94.712	ENSVPAG00000007764	DDX1	81	93.128	Vicugna_pacos
ENSCPBG00000013330	DDX1	99	92.857	ENSVVUG00000013085	DDX1	96	87.908	Vulpes_vulpes
ENSCPBG00000013330	DDX1	99	88.889	ENSXETG00000017825	ddx1	99	84.647	Xenopus_tropicalis
ENSCPBG00000013330	DDX1	99	81.558	ENSXCOG00000007082	ddx1	99	76.581	Xiphophorus_couchianus
ENSCPBG00000013330	DDX1	99	84.566	ENSXMAG00000004555	ddx1	99	79.076	Xiphophorus_maculatus