EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000013417 (Gene tree)
Gene ID: 101942869
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Plus strand
Length: 10966 bases
Position: chrKK082951.1:3765019-3775984
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000018413	GCD14	PF08704.10	0.00034	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000021739	-	4315	-	ENSCPBP00000018413	249 (aa)	XP_005284722	UPI000388D8DE

Gene Model

Click here to download ENSCPBG00000013417's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000013417's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000013417	-	91	73.009	ENSCPBG00000016587	PCMT1	86	69.512

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000013417	-	92	71.930	ENSAPOG00000013007	pcmt	84	71.930	Acanthochromis_polyacanthus
ENSCPBG00000013417	-	90	73.333	ENSACIG00000023767	pcmt	84	73.333	Amphilophus_citrinellus
ENSCPBG00000013417	-	90	70.982	ENSACIG00000024027	pcmtl	99	70.982	Amphilophus_citrinellus
ENSCPBG00000013417	-	92	71.930	ENSAOCG00000002467	pcmt	84	71.930	Amphiprion_ocellaris
ENSCPBG00000013417	-	90	72.000	ENSAPEG00000005991	pcmt	84	72.000	Amphiprion_percula
ENSCPBG00000013417	-	90	72.444	ENSATEG00000020772	pcmt	99	72.444	Anabas_testudineus
ENSCPBG00000013417	-	90	70.852	ENSAPLG00000009762	PCMT1	98	70.852	Anas_platyrhynchos
ENSCPBG00000013417	-	92	86.957	ENSAPLG00000004765	-	100	86.957	Anas_platyrhynchos
ENSCPBG00000013417	-	91	90.749	ENSACAG00000013901	-	99	90.749	Anolis_carolinensis
ENSCPBG00000013417	-	90	72.889	ENSACAG00000006734	PCMT1	99	72.889	Anolis_carolinensis
ENSCPBG00000013417	-	92	72.807	ENSACLG00000027300	pcmt	99	69.778	Astatotilapia_calliptera
ENSCPBG00000013417	-	100	70.683	ENSAMXG00000033948	pcmtl	100	70.683	Astyanax_mexicanus
ENSCPBG00000013417	-	96	68.033	ENSAMXG00000036038	pcmt	99	68.750	Astyanax_mexicanus
ENSCPBG00000013417	-	96	69.167	ENSBTAG00000010204	PCMT1	82	74.857	Bos_taurus
ENSCPBG00000013417	-	91	53.540	WBGene00003954	pcm-1	100	53.540	Caenorhabditis_elegans
ENSCPBG00000013417	-	97	69.421	ENSCHIG00000025710	PCMT1	96	72.249	Capra_hircus
ENSCPBG00000013417	-	91	62.555	ENSCHOG00000009436	PCMT1	100	62.555	Choloepus_hoffmanni
ENSCPBG00000013417	-	92	72.368	ENSCSEG00000003382	pcmt	82	72.368	Cynoglossus_semilaevis
ENSCPBG00000013417	-	100	69.880	ENSCVAG00000010875	pcmtl	100	69.880	Cyprinodon_variegatus
ENSCPBG00000013417	-	92	72.368	ENSCVAG00000021517	pcmt	84	72.368	Cyprinodon_variegatus
ENSCPBG00000013417	-	98	68.826	ENSDARG00000015201	pcmt	98	72.444	Danio_rerio
ENSCPBG00000013417	-	100	68.675	ENSDARG00000042848	pcmtl	100	68.675	Danio_rerio
ENSCPBG00000013417	-	78	74.742	ENSDORG00000003137	Pcmt1	99	74.742	Dipodomys_ordii
ENSCPBG00000013417	-	78	72.680	ENSEBUG00000000561	PCMT1	99	72.680	Eptatretus_burgeri
ENSCPBG00000013417	-	98	72.016	ENSEASG00005008914	-	85	72.016	Equus_asinus_asinus
ENSCPBG00000013417	-	98	71.605	ENSECAG00000005292	PCMT1	84	71.605	Equus_caballus
ENSCPBG00000013417	-	92	71.491	ENSEEUG00000015095	PCMT1	100	71.491	Erinaceus_europaeus
ENSCPBG00000013417	-	100	69.478	ENSELUG00000016823	pcmtl	100	69.478	Esox_lucius
ENSCPBG00000013417	-	92	72.807	ENSELUG00000019001	pcmt	85	72.807	Esox_lucius
ENSCPBG00000013417	-	78	75.773	ENSFALG00000012172	PCMT1	99	75.773	Ficedula_albicollis
ENSCPBG00000013417	-	100	87.149	ENSFALG00000001118	-	100	87.149	Ficedula_albicollis
ENSCPBG00000013417	-	92	71.930	ENSFHEG00000016480	pcmt	84	72.000	Fundulus_heteroclitus
ENSCPBG00000013417	-	92	71.930	ENSGMOG00000017692	pcmt	100	71.930	Gadus_morhua
ENSCPBG00000013417	-	100	87.550	ENSGALG00000032988	PCMT1L	100	87.805	Gallus_gallus
ENSCPBG00000013417	-	90	73.333	ENSGALG00000012388	PCMT1	99	73.333	Gallus_gallus
ENSCPBG00000013417	-	95	72.034	ENSGAFG00000003376	pcmtl	100	72.034	Gambusia_affinis
ENSCPBG00000013417	-	92	72.368	ENSGAFG00000004794	pcmt	84	72.368	Gambusia_affinis
ENSCPBG00000013417	-	100	98.394	ENSGAGG00000013101	-	100	98.394	Gopherus_agassizii
ENSCPBG00000013417	-	90	72.889	ENSGAGG00000020154	PCMT1	99	72.889	Gopherus_agassizii
ENSCPBG00000013417	-	92	73.246	ENSHBUG00000010762	pcmt	99	70.222	Haplochromis_burtoni
ENSCPBG00000013417	-	90	72.000	ENSHCOG00000010431	pcmt	89	68.595	Hippocampus_comes
ENSCPBG00000013417	-	99	68.400	ENSIPUG00000009756	pcmt1	93	68.400	Ictalurus_punctatus
ENSCPBG00000013417	-	100	68.273	ENSIPUG00000020977	pimt	100	68.273	Ictalurus_punctatus
ENSCPBG00000013417	-	90	71.111	ENSJJAG00000023560	Pcmt1	99	71.111	Jaculus_jaculus
ENSCPBG00000013417	-	100	66.667	ENSKMAG00000006639	pcmtl	100	66.667	Kryptolebias_marmoratus
ENSCPBG00000013417	-	92	72.807	ENSKMAG00000022208	pcmt	84	72.807	Kryptolebias_marmoratus
ENSCPBG00000013417	-	92	71.930	ENSLBEG00000017170	pcmt	84	71.930	Labrus_bergylta
ENSCPBG00000013417	-	97	67.480	ENSLACG00000006397	PCMT1	94	71.831	Latimeria_chalumnae
ENSCPBG00000013417	-	98	70.040	ENSLOCG00000017009	pcmt	94	73.451	Lepisosteus_oculatus
ENSCPBG00000013417	-	90	72.444	ENSLAFG00000012417	PCMT1	99	72.444	Loxodonta_africana
ENSCPBG00000013417	-	92	72.807	ENSMAMG00000000917	pcmt	84	72.807	Mastacembelus_armatus
ENSCPBG00000013417	-	90	72.889	ENSMZEG00005004971	pcmt	99	69.778	Maylandia_zebra
ENSCPBG00000013417	-	90	69.778	ENSMGAG00000012636	PCMT1	100	73.810	Meleagris_gallopavo
ENSCPBG00000013417	-	90	91.111	ENSMGAG00000003062	-	99	91.111	Meleagris_gallopavo
ENSCPBG00000013417	-	88	72.273	ENSMMOG00000015402	pcmt	87	72.273	Mola_mola
ENSCPBG00000013417	-	90	71.875	ENSMMOG00000012018	pcmtl	93	71.875	Mola_mola
ENSCPBG00000013417	-	92	73.246	ENSMALG00000020956	pcmt	100	73.246	Monopterus_albus
ENSCPBG00000013417	-	90	73.333	ENSNBRG00000003034	pcmt	99	73.333	Neolamprologus_brichardi
ENSCPBG00000013417	-	92	73.246	ENSONIG00000005572	pcmt	84	73.246	Oreochromis_niloticus
ENSCPBG00000013417	-	94	71.130	ENSOANG00000001066	PCMT1	86	71.130	Ornithorhynchus_anatinus
ENSCPBG00000013417	-	92	71.930	ENSORLG00000017625	pcmt	85	71.930	Oryzias_latipes
ENSCPBG00000013417	-	91	72.124	ENSORLG00020018295	pcmt	84	72.124	Oryzias_latipes_hni
ENSCPBG00000013417	-	90	72.000	ENSORLG00015016675	pcmt	84	72.000	Oryzias_latipes_hsok
ENSCPBG00000013417	-	92	72.368	ENSOMEG00000021999	pcmt	84	72.368	Oryzias_melastigma
ENSCPBG00000013417	-	85	72.170	ENSOARG00000002890	PCMT1	100	72.170	Ovis_aries
ENSCPBG00000013417	-	95	69.492	ENSPKIG00000022992	pcmtl	95	69.492	Paramormyrops_kingsleyae
ENSCPBG00000013417	-	97	92.531	ENSPSIG00000012438	-	100	92.531	Pelodiscus_sinensis
ENSCPBG00000013417	-	78	74.742	ENSPSIG00000017327	PCMT1	99	74.742	Pelodiscus_sinensis
ENSCPBG00000013417	-	92	62.719	ENSPMGG00000013455	pcmt	84	62.719	Periophthalmus_magnuspinnatus
ENSCPBG00000013417	-	92	71.930	ENSPFOG00000015367	pcmt	84	71.930	Poecilia_formosa
ENSCPBG00000013417	-	92	71.930	ENSPLAG00000004032	pcmt	99	68.889	Poecilia_latipinna
ENSCPBG00000013417	-	92	71.930	ENSPMEG00000010356	pcmt	84	71.930	Poecilia_mexicana
ENSCPBG00000013417	-	98	70.204	ENSPREG00000016451	pcmtl	99	70.204	Poecilia_reticulata
ENSCPBG00000013417	-	90	68.889	ENSPREG00000015965	pcmt	99	68.889	Poecilia_reticulata
ENSCPBG00000013417	-	92	48.684	ENSPCAG00000003359	PCMT1	100	48.684	Procavia_capensis
ENSCPBG00000013417	-	90	72.889	ENSPNYG00000000882	pcmt	99	69.778	Pundamilia_nyererei
ENSCPBG00000013417	-	98	67.611	ENSPNAG00000002676	pcmt	92	67.611	Pygocentrus_nattereri
ENSCPBG00000013417	-	100	69.880	ENSPNAG00000005412	pcmtl	100	69.880	Pygocentrus_nattereri
ENSCPBG00000013417	-	65	74.534	ENSSHAG00000017541	PCMT1	99	74.534	Sarcophilus_harrisii
ENSCPBG00000013417	-	90	72.889	ENSSFOG00015020607	pcmt1	99	72.889	Scleropages_formosus
ENSCPBG00000013417	-	92	72.368	ENSSMAG00000003401	pcmt	84	72.368	Scophthalmus_maximus
ENSCPBG00000013417	-	92	72.368	ENSSDUG00000007397	pcmt	84	72.368	Seriola_dumerili
ENSCPBG00000013417	-	65	73.913	ENSSLDG00000011313	-	96	73.913	Seriola_lalandi_dorsalis
ENSCPBG00000013417	-	92	72.368	ENSSLDG00000020446	pcmt	84	72.368	Seriola_lalandi_dorsalis
ENSCPBG00000013417	-	90	72.000	ENSSPUG00000005816	PCMT1	99	72.000	Sphenodon_punctatus
ENSCPBG00000013417	-	90	72.444	ENSSPAG00000016434	pcmt	84	72.444	Stegastes_partitus
ENSCPBG00000013417	-	96	69.583	ENSSSCG00000004103	PCMT1	84	69.583	Sus_scrofa
ENSCPBG00000013417	-	78	75.773	ENSTGUG00000011332	PCMT1	100	75.773	Taeniopygia_guttata
ENSCPBG00000013417	-	90	91.556	ENSTGUG00000007336	-	100	91.556	Taeniopygia_guttata
ENSCPBG00000013417	-	100	65.462	ENSTRUG00000025102	pcmtl	100	65.462	Takifugu_rubripes
ENSCPBG00000013417	-	92	70.000	ENSTNIG00000019127	pcmt	100	70.000	Tetraodon_nigroviridis
ENSCPBG00000013417	-	92	73.043	ENSXETG00000017500	pcmt1	100	77.473	Xenopus_tropicalis
ENSCPBG00000013417	-	99	74.797	ENSXETG00000015985	-	99	74.797	Xenopus_tropicalis
ENSCPBG00000013417	-	98	68.980	ENSXCOG00000007525	pcmtl	99	68.980	Xiphophorus_couchianus
ENSCPBG00000013417	-	90	69.333	ENSXCOG00000018495	pcmt	99	69.333	Xiphophorus_couchianus
ENSCPBG00000013417	-	90	72.444	ENSXMAG00000006249	pcmt	84	72.444	Xiphophorus_maculatus
ENSCPBG00000013417	-	100	68.675	ENSXMAG00000013327	pcmtl	100	68.675	Xiphophorus_maculatus