EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPBG00000013529 (Gene tree)
Gene ID: 101940759
Gene Symbol: TRANK1
Alias: KIAA0342|LBA1
Full Name: tetratricopeptide repeat and ankyrin repeat containing 1
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Minus strand
Length: 79198 bases
Position: chrKK082982.1:2179002-2258199
Accession: 29011
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000018594	UvrD-helicase	PF00580.21	8.4e-06	1	1
ENSCPBP00000018606	UvrD-helicase	PF00580.21	8.8e-06	1	1
ENSCPBP00000018602	UvrD-helicase	PF00580.21	9.7e-06	1	1
ENSCPBP00000018588	UvrD-helicase	PF00580.21	1.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000021954	TRANK1-204	9548	-	ENSCPBP00000018606	2896 (aa)	-	-
ENSCPBT00000021941	TRANK1-202	9086	XM_005302686	ENSCPBP00000018594	2929 (aa)	XP_005302743	UPI000388C071
ENSCPBT00000021935	TRANK1-201	9341	XM_005302684	ENSCPBP00000018588	3014 (aa)	XP_005302741	UPI000388EC18
ENSCPBT00000021949	TRANK1-203	9827	XM_005302685	ENSCPBP00000018602	2989 (aa)	XP_005302742	UPI0003891504

Gene Model

Click here to download ENSCPBG00000013529's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000013529's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000013529	TRANK1	83	71.418	ENSAPLG00000010356	TRANK1	98	70.887	Anas_platyrhynchos
ENSCPBG00000013529	TRANK1	57	64.346	ENSCAFG00020001387	TRANK1	99	64.485	Canis_lupus_dingo
ENSCPBG00000013529	TRANK1	98	64.845	ENSTSYG00000025860	TRANK1	97	64.958	Carlito_syrichta
ENSCPBG00000013529	TRANK1	98	63.647	ENSCLAG00000003643	TRANK1	97	64.020	Chinchilla_lanigera
ENSCPBG00000013529	TRANK1	98	65.391	ENSCANG00000039915	TRANK1	98	65.372	Colobus_angolensis_palliatus
ENSCPBG00000013529	TRANK1	98	63.203	ENSDNOG00000003573	TRANK1	99	63.188	Dasypus_novemcinctus
ENSCPBG00000013529	TRANK1	99	64.409	ENSEASG00005007374	TRANK1	97	68.146	Equus_asinus_asinus
ENSCPBG00000013529	TRANK1	99	64.673	ENSECAG00000018264	TRANK1	99	63.618	Equus_caballus
ENSCPBG00000013529	TRANK1	80	67.475	ENSEEUG00000008528	TRANK1	97	67.239	Erinaceus_europaeus
ENSCPBG00000013529	TRANK1	100	66.667	ENSFALG00000002875	TRANK1	98	66.556	Ficedula_albicollis
ENSCPBG00000013529	TRANK1	74	70.105	ENSGALG00000037629	TRANK1	100	69.720	Gallus_gallus
ENSCPBG00000013529	TRANK1	90	95.715	ENSGAGG00000009012	TRANK1	99	95.492	Gopherus_agassizii
ENSCPBG00000013529	TRANK1	98	53.708	ENSLOCG00000004808	TRANK1	97	53.708	Lepisosteus_oculatus
ENSCPBG00000013529	TRANK1	98	69.048	ENSMGAG00000011934	TRANK1	98	68.895	Meleagris_gallopavo
ENSCPBG00000013529	TRANK1	98	63.372	ENSMLUG00000003537	TRANK1	99	63.435	Myotis_lucifugus
ENSCPBG00000013529	TRANK1	99	63.744	ENSODEG00000003882	TRANK1	97	63.034	Octodon_degus
ENSCPBG00000013529	TRANK1	99	88.967	ENSPSIG00000010217	TRANK1	99	89.135	Pelodiscus_sinensis
ENSCPBG00000013529	TRANK1	66	65.394	ENSPCAG00000002172	-	87	65.310	Procavia_capensis
ENSCPBG00000013529	TRANK1	79	68.693	ENSPVAG00000004199	TRANK1	97	68.693	Pteropus_vampyrus
ENSCPBG00000013529	TRANK1	100	65.491	ENSRBIG00000012281	TRANK1	98	65.611	Rhinopithecus_bieti
ENSCPBG00000013529	TRANK1	98	65.687	ENSRROG00000044487	TRANK1	98	65.667	Rhinopithecus_roxellana
ENSCPBG00000013529	TRANK1	62	67.105	ENSSARG00000007861	-	74	67.105	Sorex_araneus
ENSCPBG00000013529	TRANK1	74	79.299	ENSSPUG00000015974	TRANK1	95	83.957	Sphenodon_punctatus
ENSCPBG00000013529	TRANK1	82	71.526	ENSTGUG00000005694	TRANK1	98	71.298	Taeniopygia_guttata
ENSCPBG00000013529	TRANK1	57	65.280	ENSUAMG00000027609	-	99	65.538	Ursus_americanus
ENSCPBG00000013529	TRANK1	57	65.315	ENSUMAG00000006416	TRANK1	99	65.574	Ursus_maritimus
ENSCPBG00000013529	TRANK1	57	63.801	ENSVVUG00000007788	TRANK1	99	64.000	Vulpes_vulpes