EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000013652 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Plus strand
Length: 2462 bases
Position: chrKK083321.1:232641-235102
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000018777	zf-C2H2	PF00096.26	1.3e-49	1	7
ENSCPBP00000018777	zf-C2H2	PF00096.26	1.3e-49	2	7
ENSCPBP00000018777	zf-C2H2	PF00096.26	1.3e-49	3	7
ENSCPBP00000018777	zf-C2H2	PF00096.26	1.3e-49	4	7
ENSCPBP00000018777	zf-C2H2	PF00096.26	1.3e-49	5	7
ENSCPBP00000018777	zf-C2H2	PF00096.26	1.3e-49	6	7
ENSCPBP00000018777	zf-C2H2	PF00096.26	1.3e-49	7	7
ENSCPBP00000018777	zf-met	PF12874.7	2.6e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000022152	-	1341	-	ENSCPBP00000018777	446 (aa)	-	-

Gene Model

Click here to download ENSCPBG00000013652's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000013652's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000013652	-	67	42.623	ENSCPBG00000009849	-	79	42.623
ENSCPBG00000013652	-	71	43.813	ENSCPBG00000017489	-	95	43.813
ENSCPBG00000013652	-	73	41.237	ENSCPBG00000005586	-	67	41.346
ENSCPBG00000013652	-	81	37.278	ENSCPBG00000016039	MYNN	52	37.278
ENSCPBG00000013652	-	67	42.857	ENSCPBG00000002063	-	55	42.857
ENSCPBG00000013652	-	70	43.771	ENSCPBG00000004030	-	87	43.771
ENSCPBG00000013652	-	68	45.902	ENSCPBG00000008580	-	75	45.902
ENSCPBG00000013652	-	80	36.905	ENSCPBG00000004542	ZNF865	81	35.943
ENSCPBG00000013652	-	71	43.066	ENSCPBG00000021479	-	97	40.171
ENSCPBG00000013652	-	66	39.630	ENSCPBG00000005703	-	50	41.667
ENSCPBG00000013652	-	73	37.113	ENSCPBG00000004296	ZBTB47	81	36.869
ENSCPBG00000013652	-	67	45.545	ENSCPBG00000015987	-	63	45.545
ENSCPBG00000013652	-	71	38.686	ENSCPBG00000021487	-	70	38.686
ENSCPBG00000013652	-	66	36.792	ENSCPBG00000027302	ZNF652	52	36.792
ENSCPBG00000013652	-	68	42.424	ENSCPBG00000001272	-	71	42.424
ENSCPBG00000013652	-	71	34.957	ENSCPBG00000026947	ZNF319	88	37.153
ENSCPBG00000013652	-	83	33.824	ENSCPBG00000003495	ZNF236	64	36.913
ENSCPBG00000013652	-	77	44.257	ENSCPBG00000001421	-	98	42.177
ENSCPBG00000013652	-	72	42.574	ENSCPBG00000003774	-	91	41.528
ENSCPBG00000013652	-	67	49.020	ENSCPBG00000016841	-	81	44.649
ENSCPBG00000013652	-	81	38.624	ENSCPBG00000024735	PRDM5	74	36.577
ENSCPBG00000013652	-	73	44.444	ENSCPBG00000004990	-	100	44.238
ENSCPBG00000013652	-	67	38.732	ENSCPBG00000028270	ZBTB41	59	38.732
ENSCPBG00000013652	-	70	45.926	ENSCPBG00000001526	-	79	51.485
ENSCPBG00000013652	-	76	41.284	ENSCPBG00000003130	-	96	44.199
ENSCPBG00000013652	-	67	47.872	ENSCPBG00000002430	-	76	42.041
ENSCPBG00000013652	-	76	43.007	ENSCPBG00000017494	-	85	41.946
ENSCPBG00000013652	-	77	46.067	ENSCPBG00000015500	-	91	44.295
ENSCPBG00000013652	-	76	43.000	ENSCPBG00000012976	-	93	42.449
ENSCPBG00000013652	-	76	44.444	ENSCPBG00000001181	-	99	47.586
ENSCPBG00000013652	-	82	42.460	ENSCPBG00000009609	-	81	42.460
ENSCPBG00000013652	-	68	47.771	ENSCPBG00000002014	-	56	45.946

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000013652	-	76	42.593	ENSACAG00000008664	-	68	42.593	Anolis_carolinensis
ENSCPBG00000013652	-	73	40.404	ENSACAG00000024898	-	98	40.404	Anolis_carolinensis
ENSCPBG00000013652	-	68	43.066	ENSACAG00000024956	-	79	42.088	Anolis_carolinensis
ENSCPBG00000013652	-	74	41.975	ENSAMXG00000034344	-	79	40.476	Astyanax_mexicanus
ENSCPBG00000013652	-	64	48.649	ENSAMXG00000042784	-	94	48.649	Astyanax_mexicanus
ENSCPBG00000013652	-	67	46.667	ENSAMXG00000034847	-	86	46.667	Astyanax_mexicanus
ENSCPBG00000013652	-	78	43.860	ENSAMXG00000010805	-	96	43.860	Astyanax_mexicanus
ENSCPBG00000013652	-	69	44.403	ENSAMXG00000042746	-	88	44.403	Astyanax_mexicanus
ENSCPBG00000013652	-	68	43.223	ENSAMXG00000038325	-	91	43.223	Astyanax_mexicanus
ENSCPBG00000013652	-	67	40.753	ENSAMXG00000038636	-	98	41.077	Astyanax_mexicanus
ENSCPBG00000013652	-	67	42.907	ENSAMXG00000025452	-	94	42.907	Astyanax_mexicanus
ENSCPBG00000013652	-	67	47.573	ENSAMXG00000032841	-	78	47.573	Astyanax_mexicanus
ENSCPBG00000013652	-	67	41.667	ENSAMXG00000036233	-	78	41.667	Astyanax_mexicanus
ENSCPBG00000013652	-	69	39.080	ENSAMXG00000035246	-	74	36.449	Astyanax_mexicanus
ENSCPBG00000013652	-	69	44.030	ENSAMXG00000038536	-	88	44.030	Astyanax_mexicanus
ENSCPBG00000013652	-	67	40.000	ENSBTAG00000038322	-	76	42.857	Bos_taurus
ENSCPBG00000013652	-	69	39.450	ENSCSAVG00000010960	-	99	39.450	Ciona_savignyi
ENSCPBG00000013652	-	69	38.144	ENSDNOG00000047495	-	79	37.742	Dasypus_novemcinctus
ENSCPBG00000013652	-	67	34.021	ENSEBUG00000005264	-	74	34.021	Eptatretus_burgeri
ENSCPBG00000013652	-	67	37.722	ENSEBUG00000015837	-	81	37.410	Eptatretus_burgeri
ENSCPBG00000013652	-	81	41.077	ENSEBUG00000012919	-	77	40.678	Eptatretus_burgeri
ENSCPBG00000013652	-	75	39.259	ENSEBUG00000011435	-	86	39.259	Eptatretus_burgeri
ENSCPBG00000013652	-	72	40.458	ENSEBUG00000002075	-	83	40.458	Eptatretus_burgeri
ENSCPBG00000013652	-	73	40.000	ENSEBUG00000008306	-	92	40.000	Eptatretus_burgeri
ENSCPBG00000013652	-	71	40.000	ENSEBUG00000014717	-	74	40.000	Eptatretus_burgeri
ENSCPBG00000013652	-	71	35.088	ENSEBUG00000013875	-	81	35.088	Eptatretus_burgeri
ENSCPBG00000013652	-	72	39.355	ENSEBUG00000011694	-	95	39.355	Eptatretus_burgeri
ENSCPBG00000013652	-	71	39.837	ENSEASG00005004469	-	74	39.837	Equus_asinus_asinus
ENSCPBG00000013652	-	67	38.521	ENSGMOG00000018506	-	99	38.095	Gadus_morhua
ENSCPBG00000013652	-	67	42.915	ENSGALG00000049609	-	56	40.288	Gallus_gallus
ENSCPBG00000013652	-	67	44.407	ENSGALG00000046336	-	99	44.407	Gallus_gallus
ENSCPBG00000013652	-	68	40.323	ENSGALG00000053507	-	78	40.323	Gallus_gallus
ENSCPBG00000013652	-	67	47.170	ENSGALG00000044069	-	57	47.170	Gallus_gallus
ENSCPBG00000013652	-	67	45.819	ENSGALG00000054325	-	99	45.819	Gallus_gallus
ENSCPBG00000013652	-	77	41.270	ENSGALG00000055127	-	82	41.818	Gallus_gallus
ENSCPBG00000013652	-	74	43.956	ENSGAGG00000011366	-	94	41.528	Gopherus_agassizii
ENSCPBG00000013652	-	70	45.926	ENSGAGG00000011399	-	86	51.456	Gopherus_agassizii
ENSCPBG00000013652	-	69	39.116	ENSGAGG00000018885	-	69	39.116	Gopherus_agassizii
ENSCPBG00000013652	-	67	41.434	ENSHCOG00000018201	-	88	41.434	Hippocampus_comes
ENSCPBG00000013652	-	75	44.737	ENSIPUG00000015468	-	88	42.532	Ictalurus_punctatus
ENSCPBG00000013652	-	70	37.200	ENSIPUG00000012109	ZN12	51	37.500	Ictalurus_punctatus
ENSCPBG00000013652	-	67	42.475	ENSIPUG00000021515	-	86	42.475	Ictalurus_punctatus
ENSCPBG00000013652	-	68	40.945	ENSJJAG00000023633	Zfp672	90	41.026	Jaculus_jaculus
ENSCPBG00000013652	-	67	39.057	ENSLACG00000022211	-	77	39.057	Latimeria_chalumnae
ENSCPBG00000013652	-	69	35.581	ENSLACG00000009005	-	100	35.955	Latimeria_chalumnae
ENSCPBG00000013652	-	76	36.202	ENSLACG00000005264	-	96	39.057	Latimeria_chalumnae
ENSCPBG00000013652	-	67	44.595	ENSLOCG00000014210	-	50	44.595	Lepisosteus_oculatus
ENSCPBG00000013652	-	67	43.852	ENSLOCG00000017864	-	99	43.852	Lepisosteus_oculatus
ENSCPBG00000013652	-	66	39.933	ENSMGAG00000013362	-	100	40.826	Meleagris_gallopavo
ENSCPBG00000013652	-	72	37.705	ENSMAUG00000009945	Zfp672	89	39.483	Mesocricetus_auratus
ENSCPBG00000013652	-	68	44.340	ENSMMOG00000003923	-	83	44.340	Mola_mola
ENSCPBG00000013652	-	67	43.289	ENSMODG00000010532	-	86	43.289	Monodelphis_domestica
ENSCPBG00000013652	-	81	42.123	ENSMODG00000001880	-	79	42.123	Monodelphis_domestica
ENSCPBG00000013652	-	66	44.770	MGP_CAROLIEiJ_G0030502	-	62	43.269	Mus_caroli
ENSCPBG00000013652	-	68	37.959	MGP_CAROLIEiJ_G0016391	Zfp672	97	43.373	Mus_caroli
ENSCPBG00000013652	-	66	43.071	ENSMUSG00000030823	9130019O22Rik	67	43.071	Mus_musculus
ENSCPBG00000013652	-	72	37.959	MGP_SPRETEiJ_G0017233	Zfp672	97	42.500	Mus_spretus
ENSCPBG00000013652	-	68	39.604	MGP_SPRETEiJ_G0031613	-	94	35.777	Mus_spretus
ENSCPBG00000013652	-	68	38.721	ENSNGAG00000015777	Zim1	61	38.721	Nannospalax_galili
ENSCPBG00000013652	-	71	46.364	ENSNBRG00000007276	-	59	46.364	Neolamprologus_brichardi
ENSCPBG00000013652	-	69	42.123	ENSNBRG00000000708	-	89	42.123	Neolamprologus_brichardi
ENSCPBG00000013652	-	60	45.833	ENSORLG00020001922	-	86	44.361	Oryzias_latipes_hni
ENSCPBG00000013652	-	81	42.745	ENSPSIG00000000672	-	83	54.795	Pelodiscus_sinensis
ENSCPBG00000013652	-	67	42.276	ENSPSIG00000013021	-	77	41.892	Pelodiscus_sinensis
ENSCPBG00000013652	-	67	41.137	ENSPSIG00000012650	-	78	41.137	Pelodiscus_sinensis
ENSCPBG00000013652	-	67	40.800	ENSPSIG00000003152	-	78	39.333	Pelodiscus_sinensis
ENSCPBG00000013652	-	66	40.426	ENSPSIG00000010328	-	76	39.863	Pelodiscus_sinensis
ENSCPBG00000013652	-	67	40.265	ENSPSIG00000005672	-	79	39.442	Pelodiscus_sinensis
ENSCPBG00000013652	-	69	42.282	ENSPSIG00000010248	-	65	41.275	Pelodiscus_sinensis
ENSCPBG00000013652	-	74	43.098	ENSPSIG00000015459	-	73	43.678	Pelodiscus_sinensis
ENSCPBG00000013652	-	69	38.811	ENSPSIG00000004502	-	57	37.049	Pelodiscus_sinensis
ENSCPBG00000013652	-	78	64.576	ENSPSIG00000006586	-	99	64.576	Pelodiscus_sinensis
ENSCPBG00000013652	-	66	42.177	ENSPSIG00000005603	-	71	42.177	Pelodiscus_sinensis
ENSCPBG00000013652	-	73	42.279	ENSPSIG00000016380	-	73	42.279	Pelodiscus_sinensis
ENSCPBG00000013652	-	77	47.573	ENSPREG00000002642	-	92	47.573	Poecilia_reticulata
ENSCPBG00000013652	-	68	45.312	ENSPNYG00000015486	-	63	45.312	Pundamilia_nyererei
ENSCPBG00000013652	-	67	43.192	ENSPNAG00000018395	-	66	42.678	Pygocentrus_nattereri
ENSCPBG00000013652	-	66	44.218	ENSPNAG00000000088	-	87	44.218	Pygocentrus_nattereri
ENSCPBG00000013652	-	71	40.000	ENSRNOG00000002713	Zfp672	89	39.781	Rattus_norvegicus
ENSCPBG00000013652	-	76	41.216	ENSSHAG00000018106	-	76	41.216	Sarcophilus_harrisii
ENSCPBG00000013652	-	72	43.137	ENSSFOG00015019818	-	92	40.550	Scleropages_formosus
ENSCPBG00000013652	-	72	34.405	ENSSMAG00000004252	-	89	35.754	Scophthalmus_maximus
ENSCPBG00000013652	-	72	42.282	ENSSPUG00000010016	-	91	42.282	Sphenodon_punctatus
ENSCPBG00000013652	-	66	42.188	ENSSPUG00000004366	-	59	42.188	Sphenodon_punctatus
ENSCPBG00000013652	-	65	48.515	ENSSPAG00000021653	-	84	48.515	Stegastes_partitus
ENSCPBG00000013652	-	69	43.007	ENSTGUG00000015210	-	100	43.007	Taeniopygia_guttata
ENSCPBG00000013652	-	77	39.929	ENSTRUG00000022066	-	94	40.449	Takifugu_rubripes
ENSCPBG00000013652	-	67	38.305	ENSXETG00000031192	-	100	38.305	Xenopus_tropicalis
ENSCPBG00000013652	-	68	41.085	ENSXCOG00000006553	-	87	41.085	Xiphophorus_couchianus
ENSCPBG00000013652	-	67	37.555	ENSXMAG00000026680	-	77	37.555	Xiphophorus_maculatus